Protein–RNA interactions for Protein: Q9P2V4

LRIT1, Leucine-rich repeat, immunoglobulin-like domain and transmembrane domain-containing protein 1, humanhuman

Predictions only

Length 623 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRIT1Q9P2V4 AC008781.2-201ENST00000502205 2480 ntTSL 1 (best) BASIC1.51□□□□□ -2.17
LRIT1Q9P2V4 RNY1P13-201ENST00000365030 105 ntBASIC1.5□□□□□ -2.17
LRIT1Q9P2V4 SNORD115-35-201ENST00000365122 82 ntBASIC1.5□□□□□ -2.17
LRIT1Q9P2V4 RNU6-1065P-201ENST00000384513 106 ntBASIC1.5□□□□□ -2.17
LRIT1Q9P2V4 SNORD38B-201ENST00000384690 67 ntBASIC1.5□□□□□ -2.17
LRIT1Q9P2V4 RNU6-1086P-201ENST00000410930 100 ntBASIC1.5□□□□□ -2.17
LRIT1Q9P2V4 AL365434.1-201ENST00000412362 380 ntTSL 3 BASIC1.5□□□□□ -2.17
LRIT1Q9P2V4 SCARNA23-201ENST00000516060 130 ntBASIC1.5□□□□□ -2.17
LRIT1Q9P2V4 RNU7-2P-201ENST00000516096 62 ntBASIC1.5□□□□□ -2.17
LRIT1Q9P2V4 RNU7-137P-201ENST00000516788 62 ntBASIC1.5□□□□□ -2.17
LRIT1Q9P2V4 PNRC2-204ENST00000579103 171 ntTSL 2 BASIC1.5□□□□□ -2.17
LRIT1Q9P2V4 GNAS-AS1_4.1-201ENST00000616546 112 ntBASIC1.5□□□□□ -2.17
LRIT1Q9P2V4 AC105081.1-201ENST00000617727 106 ntBASIC1.5□□□□□ -2.17
LRIT1Q9P2V4 MIR6740-201ENST00000618268 113 ntBASIC1.5□□□□□ -2.17
LRIT1Q9P2V4 SNORD38B-202ENST00000625943 69 ntBASIC1.5□□□□□ -2.17
LRIT1Q9P2V4 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC1.49□□□□□ -2.17
LRIT1Q9P2V4 RNU6-1313P-201ENST00000362622 102 ntBASIC1.49□□□□□ -2.17
LRIT1Q9P2V4 Y_RNA.342-201ENST00000365352 113 ntBASIC1.49□□□□□ -2.17
LRIT1Q9P2V4 Y_RNA.354-201ENST00000365448 111 ntBASIC1.49□□□□□ -2.17
LRIT1Q9P2V4 RPS27P16-201ENST00000425758 201 ntBASIC1.49□□□□□ -2.17
LRIT1Q9P2V4 RNU6-1006P-201ENST00000516998 103 ntBASIC1.49□□□□□ -2.17
LRIT1Q9P2V4 RNU6-158P-201ENST00000517104 100 ntBASIC1.49□□□□□ -2.17
LRIT1Q9P2V4 SNORA31.24-201ENST00000517232 57 ntBASIC1.49□□□□□ -2.17
LRIT1Q9P2V4 AL357312.1-201ENST00000603879 298 ntBASIC1.49□□□□□ -2.17
LRIT1Q9P2V4 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC1.48□□□□□ -2.17
LRIT1Q9P2V4 Y_RNA.107-201ENST00000363190 121 ntBASIC1.48□□□□□ -2.17
LRIT1Q9P2V4 RNU4-36P-201ENST00000364294 144 ntBASIC1.48□□□□□ -2.17
LRIT1Q9P2V4 RNU6-654P-201ENST00000364373 107 ntBASIC1.48□□□□□ -2.17
LRIT1Q9P2V4 RNA5SP363-201ENST00000365072 115 ntBASIC1.48□□□□□ -2.17
LRIT1Q9P2V4 MIR34C-201ENST00000384831 77 ntBASIC1.48□□□□□ -2.17
LRIT1Q9P2V4 RNU6-1321P-201ENST00000390905 107 ntBASIC1.48□□□□□ -2.17
LRIT1Q9P2V4 MIR1323-201ENST00000408090 73 ntBASIC1.48□□□□□ -2.17
LRIT1Q9P2V4 Y_RNA.601-201ENST00000410500 113 ntBASIC1.48□□□□□ -2.17
LRIT1Q9P2V4 RNU1-92P-201ENST00000517017 135 ntBASIC1.48□□□□□ -2.17
LRIT1Q9P2V4 AC141846.1-201ENST00000568348 142 ntBASIC1.48□□□□□ -2.17
LRIT1Q9P2V4 MIR4777-201ENST00000583710 86 ntBASIC1.48□□□□□ -2.17
LRIT1Q9P2V4 FAM13A-AS1_1.1-201ENST00000612555 119 ntBASIC1.48□□□□□ -2.17
LRIT1Q9P2V4 MIR6516-201ENST00000630554 81 ntBASIC1.48□□□□□ -2.17
LRIT1Q9P2V4 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC1.48□□□□□ -2.17
LRIT1Q9P2V4 RNU6-170P-201ENST00000362832 104 ntBASIC1.47□□□□□ -2.17
LRIT1Q9P2V4 Y_RNA.93-201ENST00000363066 109 ntBASIC1.47□□□□□ -2.17
LRIT1Q9P2V4 Y_RNA.377-201ENST00000365644 108 ntBASIC1.47□□□□□ -2.17
LRIT1Q9P2V4 Y_RNA.448-201ENST00000384185 108 ntBASIC1.47□□□□□ -2.17
LRIT1Q9P2V4 RNU6-205P-201ENST00000390858 107 ntBASIC1.47□□□□□ -2.17
LRIT1Q9P2V4 RNA5SP95-201ENST00000410319 137 ntBASIC1.47□□□□□ -2.17
LRIT1Q9P2V4 MRPL35P3-201ENST00000421557 364 ntBASIC1.47□□□□□ -2.17
LRIT1Q9P2V4 RNU1-98P-201ENST00000458992 160 ntBASIC1.47□□□□□ -2.17
LRIT1Q9P2V4 snoU13.2-201ENST00000459201 104 ntBASIC1.47□□□□□ -2.17
LRIT1Q9P2V4 RNU7-61P-201ENST00000515897 61 ntBASIC1.47□□□□□ -2.17
LRIT1Q9P2V4 RNU6-1018P-201ENST00000516577 106 ntBASIC1.47□□□□□ -2.17
LRIT1Q9P2V4 AL662814.1-201ENST00000617364 121 ntBASIC1.47□□□□□ -2.17
LRIT1Q9P2V4 ZNF209P-201ENST00000593450 2304 ntBASIC1.47□□□□□ -2.17
LRIT1Q9P2V4 MIR563-201ENST00000385080 79 ntBASIC1.46□□□□□ -2.18
LRIT1Q9P2V4 RNU6-644P-201ENST00000391155 98 ntBASIC1.46□□□□□ -2.18
LRIT1Q9P2V4 MIR3664-201ENST00000579074 99 ntBASIC1.46□□□□□ -2.18
LRIT1Q9P2V4 AC006254.2-201ENST00000603259 279 ntBASIC1.46□□□□□ -2.18
LRIT1Q9P2V4 MIR376B-201ENST00000614515 100 ntBASIC1.46□□□□□ -2.18
LRIT1Q9P2V4 AL442128.1-201ENST00000615151 90 ntBASIC1.46□□□□□ -2.18
LRIT1Q9P2V4 SEPT14P17-201ENST00000617978 177 ntBASIC1.46□□□□□ -2.18
LRIT1Q9P2V4 MALAT1.1-201ENST00000618249 95 ntBASIC1.46□□□□□ -2.18
LRIT1Q9P2V4 AL512310.12-203ENST00000640543 90 ntBASIC1.46□□□□□ -2.18
LRIT1Q9P2V4 SNORA7.1-201ENST00000363750 139 ntBASIC1.45□□□□□ -2.18
LRIT1Q9P2V4 Y_RNA.290-201ENST00000364879 114 ntBASIC1.45□□□□□ -2.18
LRIT1Q9P2V4 Y_RNA.467-201ENST00000384297 102 ntBASIC1.45□□□□□ -2.18
LRIT1Q9P2V4 MIR588-201ENST00000384900 83 ntBASIC1.45□□□□□ -2.18
LRIT1Q9P2V4 ZNF468-202ENST00000396409 384 ntTSL 5 BASIC1.45□□□□□ -2.18
LRIT1Q9P2V4 MIR1304-201ENST00000408243 91 ntBASIC1.45□□□□□ -2.18
LRIT1Q9P2V4 AC096949.1-201ENST00000412047 152 ntBASIC1.45□□□□□ -2.18
LRIT1Q9P2V4 AC004941.2-201ENST00000427009 228 ntBASIC1.45□□□□□ -2.18
LRIT1Q9P2V4 AL512310.8-201ENST00000550183 120 ntBASIC1.45□□□□□ -2.18
LRIT1Q9P2V4 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC1.44□□□□□ -2.18
LRIT1Q9P2V4 ABCA5-201ENST00000392676 8220 ntAPPRIS P1 TSL 1 (best) BASIC1.44□□□□□ -2.18
LRIT1Q9P2V4 RNA5SP264-201ENST00000363115 107 ntBASIC1.44□□□□□ -2.18
LRIT1Q9P2V4 RNU6-997P-201ENST00000384725 107 ntBASIC1.44□□□□□ -2.18
LRIT1Q9P2V4 MIR7-2-201ENST00000384970 110 ntBASIC1.44□□□□□ -2.18
LRIT1Q9P2V4 RNU6ATAC42P-201ENST00000408637 95 ntBASIC1.44□□□□□ -2.18
LRIT1Q9P2V4 AL354695.1-201ENST00000427935 228 ntBASIC1.44□□□□□ -2.18
LRIT1Q9P2V4 NMTRQ-TTG12-1-201ENST00000467595 72 ntBASIC1.44□□□□□ -2.18
LRIT1Q9P2V4 AC023790.1-201ENST00000482174 347 ntBASIC1.44□□□□□ -2.18
LRIT1Q9P2V4 AL133373.1-201ENST00000497098 94 ntBASIC1.44□□□□□ -2.18
LRIT1Q9P2V4 NFIA-AS1-206ENST00000630199 220 ntTSL 5 BASIC1.44□□□□□ -2.18
LRIT1Q9P2V4 MIR30D-201ENST00000362283 70 ntBASIC1.43□□□□□ -2.18
LRIT1Q9P2V4 SNORD114-10-201ENST00000363409 72 ntBASIC1.43□□□□□ -2.18
LRIT1Q9P2V4 RNU6-294P-201ENST00000364999 102 ntBASIC1.43□□□□□ -2.18
LRIT1Q9P2V4 Y_RNA.327-201ENST00000365201 102 ntBASIC1.43□□□□□ -2.18
LRIT1Q9P2V4 RNU6-396P-201ENST00000365369 105 ntBASIC1.43□□□□□ -2.18
LRIT1Q9P2V4 RNU6-162P-201ENST00000516228 103 ntBASIC1.43□□□□□ -2.18
LRIT1Q9P2V4 MIR4421-201ENST00000578133 69 ntBASIC1.43□□□□□ -2.18
LRIT1Q9P2V4 MIR103A2-201ENST00000362154 78 ntBASIC1.42□□□□□ -2.18
LRIT1Q9P2V4 Y_RNA.95-201ENST00000363079 95 ntBASIC1.42□□□□□ -2.18
LRIT1Q9P2V4 RNU6-949P-201ENST00000384040 107 ntBASIC1.42□□□□□ -2.18
LRIT1Q9P2V4 RNU6-42P-201ENST00000384165 107 ntBASIC1.42□□□□□ -2.18
LRIT1Q9P2V4 RNA5SP237-201ENST00000410414 113 ntBASIC1.42□□□□□ -2.18
LRIT1Q9P2V4 AC109327.2-201ENST00000448339 378 ntBASIC1.42□□□□□ -2.18
LRIT1Q9P2V4 AC048334.1-201ENST00000477975 159 ntBASIC1.42□□□□□ -2.18
LRIT1Q9P2V4 Y_RNA.659-201ENST00000515994 113 ntBASIC1.42□□□□□ -2.18
LRIT1Q9P2V4 RNU6-762P-201ENST00000517107 102 ntBASIC1.42□□□□□ -2.18
LRIT1Q9P2V4 SNORA4-201ENST00000584302 138 ntBASIC1.42□□□□□ -2.18
LRIT1Q9P2V4 Y_RNA.10-201ENST00000362371 110 ntBASIC1.41□□□□□ -2.18
LRIT1Q9P2V4 SNORD73B-201ENST00000364394 72 ntBASIC1.41□□□□□ -2.18
Retrieved 100 of 98,524 protein–RNA pairs in 181.9 ms