Protein–RNA interactions for Protein: Q9C0C4

SEMA4C, Semaphorin-4C, humanhuman

Predictions only

Length 833 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4CQ9C0C4 RNU6-162P-201ENST00000516228 103 ntBASIC1.48□□□□□ -2.17
SEMA4CQ9C0C4 AC012531.4-201ENST00000616509 177 ntBASIC1.48□□□□□ -2.17
SEMA4CQ9C0C4 AL512310.12-203ENST00000640543 90 ntBASIC1.48□□□□□ -2.17
SEMA4CQ9C0C4 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC1.47□□□□□ -2.17
SEMA4CQ9C0C4 Y_RNA.544-201ENST00000384650 113 ntBASIC1.47□□□□□ -2.17
SEMA4CQ9C0C4 SNORA67.6-201ENST00000391093 99 ntBASIC1.47□□□□□ -2.17
SEMA4CQ9C0C4 AC027119.1-201ENST00000440877 241 ntBASIC1.47□□□□□ -2.17
SEMA4CQ9C0C4 snoU13.25-201ENST00000458945 104 ntBASIC1.47□□□□□ -2.17
SEMA4CQ9C0C4 SNORD67.1-201ENST00000516618 108 ntBASIC1.47□□□□□ -2.17
SEMA4CQ9C0C4 MIR8074-201ENST00000615081 81 ntBASIC1.47□□□□□ -2.17
SEMA4CQ9C0C4 FAM19A1-204ENST00000617084 159 ntTSL 5 BASIC1.47□□□□□ -2.17
SEMA4CQ9C0C4 NFIA-AS1-206ENST00000630199 220 ntTSL 5 BASIC1.47□□□□□ -2.17
SEMA4CQ9C0C4 Z97988.1-201ENST00000637697 135 ntBASIC1.47□□□□□ -2.17
SEMA4CQ9C0C4 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC1.47□□□□□ -2.17
SEMA4CQ9C0C4 ZNF209P-201ENST00000593450 2304 ntBASIC1.46□□□□□ -2.18
SEMA4CQ9C0C4 RNU4-36P-201ENST00000364294 144 ntBASIC1.46□□□□□ -2.18
SEMA4CQ9C0C4 Y_RNA.247-201ENST00000364500 92 ntBASIC1.46□□□□□ -2.18
SEMA4CQ9C0C4 HSPE1P24-201ENST00000450782 238 ntBASIC1.46□□□□□ -2.18
SEMA4CQ9C0C4 AC015688.6-201ENST00000577737 104 ntBASIC1.46□□□□□ -2.18
SEMA4CQ9C0C4 FAM71BP1-201ENST00000604431 523 ntBASIC1.46□□□□□ -2.18
SEMA4CQ9C0C4 AL353770.2-201ENST00000620024 78 ntBASIC1.46□□□□□ -2.18
SEMA4CQ9C0C4 SKIL-204ENST00000458537 7182 ntAPPRIS P1 TSL 1 (best) BASIC1.46□□□□□ -2.18
SEMA4CQ9C0C4 KIAA1551-201ENST00000312561 6230 ntAPPRIS P1 TSL 1 (best) BASIC1.45□□□□□ -2.18
SEMA4CQ9C0C4 Y_RNA.107-201ENST00000363190 121 ntBASIC1.45□□□□□ -2.18
SEMA4CQ9C0C4 RNU6-832P-201ENST00000363319 107 ntBASIC1.45□□□□□ -2.18
SEMA4CQ9C0C4 MIR206-201ENST00000384872 86 ntBASIC1.45□□□□□ -2.18
SEMA4CQ9C0C4 RNU6-205P-201ENST00000390858 107 ntBASIC1.45□□□□□ -2.18
SEMA4CQ9C0C4 RNU6-644P-201ENST00000391155 98 ntBASIC1.45□□□□□ -2.18
SEMA4CQ9C0C4 RNA5SP95-201ENST00000410319 137 ntBASIC1.45□□□□□ -2.18
SEMA4CQ9C0C4 MTATP8P2-201ENST00000435212 202 ntBASIC1.45□□□□□ -2.18
SEMA4CQ9C0C4 RNU7-61P-201ENST00000515897 61 ntBASIC1.45□□□□□ -2.18
SEMA4CQ9C0C4 Y_RNA.659-201ENST00000515994 113 ntBASIC1.45□□□□□ -2.18
SEMA4CQ9C0C4 SCARNA23-201ENST00000516060 130 ntBASIC1.45□□□□□ -2.18
SEMA4CQ9C0C4 RNU7-79P-201ENST00000516082 62 ntBASIC1.45□□□□□ -2.18
SEMA4CQ9C0C4 PRELID3BP2-201ENST00000605362 201 ntBASIC1.45□□□□□ -2.18
SEMA4CQ9C0C4 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC1.45□□□□□ -2.18
SEMA4CQ9C0C4 RNU6-294P-201ENST00000364999 102 ntBASIC1.44□□□□□ -2.18
SEMA4CQ9C0C4 Y_RNA.448-201ENST00000384185 108 ntBASIC1.44□□□□□ -2.18
SEMA4CQ9C0C4 SNORD38B-201ENST00000384690 67 ntBASIC1.44□□□□□ -2.18
SEMA4CQ9C0C4 MIR520E-201ENST00000384867 87 ntBASIC1.44□□□□□ -2.18
SEMA4CQ9C0C4 MIR598-201ENST00000384868 97 ntBASIC1.44□□□□□ -2.18
SEMA4CQ9C0C4 MIR517C-201ENST00000385103 95 ntBASIC1.44□□□□□ -2.18
SEMA4CQ9C0C4 MRPL35P3-201ENST00000421557 364 ntBASIC1.44□□□□□ -2.18
SEMA4CQ9C0C4 RNU1-98P-201ENST00000458992 160 ntBASIC1.44□□□□□ -2.18
SEMA4CQ9C0C4 RPS29P1-201ENST00000465274 159 ntBASIC1.44□□□□□ -2.18
SEMA4CQ9C0C4 UBL5P1-201ENST00000507979 193 ntBASIC1.44□□□□□ -2.18
SEMA4CQ9C0C4 MIR376B-201ENST00000614515 100 ntBASIC1.44□□□□□ -2.18
SEMA4CQ9C0C4 SNORD38B-202ENST00000625943 69 ntBASIC1.44□□□□□ -2.18
SEMA4CQ9C0C4 ZGRF1-208ENST00000505019 6652 ntAPPRIS P1 TSL 5 BASIC1.43□□□□□ -2.18
SEMA4CQ9C0C4 RNU1-93P-201ENST00000364704 169 ntBASIC1.43□□□□□ -2.18
SEMA4CQ9C0C4 Y_RNA.342-201ENST00000365352 113 ntBASIC1.43□□□□□ -2.18
SEMA4CQ9C0C4 Y_RNA.369-201ENST00000365568 117 ntBASIC1.43□□□□□ -2.18
SEMA4CQ9C0C4 RNU6-1201P-201ENST00000384227 107 ntBASIC1.43□□□□□ -2.18
SEMA4CQ9C0C4 Y_RNA.467-201ENST00000384297 102 ntBASIC1.43□□□□□ -2.18
SEMA4CQ9C0C4 MIR34C-201ENST00000384831 77 ntBASIC1.43□□□□□ -2.18
SEMA4CQ9C0C4 MIR1302-7-201ENST00000408841 72 ntBASIC1.43□□□□□ -2.18
SEMA4CQ9C0C4 AL365434.1-201ENST00000412362 380 ntTSL 3 BASIC1.43□□□□□ -2.18
SEMA4CQ9C0C4 AC244023.1-201ENST00000426884 112 ntBASIC1.43□□□□□ -2.18
SEMA4CQ9C0C4 RNU7-2P-201ENST00000516096 62 ntBASIC1.43□□□□□ -2.18
SEMA4CQ9C0C4 RNU7-35P-201ENST00000517174 62 ntBASIC1.43□□□□□ -2.18
SEMA4CQ9C0C4 MIR4694-201ENST00000578534 80 ntBASIC1.43□□□□□ -2.18
SEMA4CQ9C0C4 AC242498.1-201ENST00000604134 111 ntBASIC1.43□□□□□ -2.18
SEMA4CQ9C0C4 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC1.42□□□□□ -2.18
SEMA4CQ9C0C4 RNU6-170P-201ENST00000362832 104 ntBASIC1.42□□□□□ -2.18
SEMA4CQ9C0C4 Y_RNA.78-201ENST00000362970 110 ntBASIC1.42□□□□□ -2.18
SEMA4CQ9C0C4 SNORD73B-201ENST00000364394 72 ntBASIC1.42□□□□□ -2.18
SEMA4CQ9C0C4 SNORD115-35-201ENST00000365122 82 ntBASIC1.42□□□□□ -2.18
SEMA4CQ9C0C4 RNA5SP237-201ENST00000410414 113 ntBASIC1.42□□□□□ -2.18
SEMA4CQ9C0C4 RNU6-955P-201ENST00000410497 104 ntBASIC1.42□□□□□ -2.18
SEMA4CQ9C0C4 AC073127.1-201ENST00000447336 333 ntTSL 3 BASIC1.42□□□□□ -2.18
SEMA4CQ9C0C4 snoU13.9-201ENST00000458927 103 ntBASIC1.42□□□□□ -2.18
SEMA4CQ9C0C4 RNU6-762P-201ENST00000517107 102 ntBASIC1.42□□□□□ -2.18
SEMA4CQ9C0C4 IGLVVI-22-1-201ENST00000521183 211 ntBASIC1.42□□□□□ -2.18
SEMA4CQ9C0C4 uc_338.6-201ENST00000613544 171 ntBASIC1.42□□□□□ -2.18
SEMA4CQ9C0C4 MALAT1.1-201ENST00000618249 95 ntBASIC1.42□□□□□ -2.18
SEMA4CQ9C0C4 Y_RNA.818-201ENST00000618813 71 ntBASIC1.42□□□□□ -2.18
SEMA4CQ9C0C4 RNU6-654P-201ENST00000364373 107 ntBASIC1.41□□□□□ -2.18
SEMA4CQ9C0C4 RNU6-1321P-201ENST00000390905 107 ntBASIC1.41□□□□□ -2.18
SEMA4CQ9C0C4 Y_RNA.601-201ENST00000410500 113 ntBASIC1.41□□□□□ -2.18
SEMA4CQ9C0C4 GHRLOS.1-201ENST00000610995 70 ntBASIC1.41□□□□□ -2.18
SEMA4CQ9C0C4 SPTSSB-205ENST00000620149 231 ntAPPRIS P1 BASIC1.41□□□□□ -2.18
SEMA4CQ9C0C4 SNORD114-27-201ENST00000363766 70 ntBASIC1.4□□□□□ -2.19
SEMA4CQ9C0C4 RNA5SP48-201ENST00000363969 126 ntBASIC1.4□□□□□ -2.19
SEMA4CQ9C0C4 SNORD1A-201ENST00000364968 72 ntBASIC1.4□□□□□ -2.19
SEMA4CQ9C0C4 RNY1P13-201ENST00000365030 105 ntBASIC1.4□□□□□ -2.19
SEMA4CQ9C0C4 MIR588-201ENST00000384900 83 ntBASIC1.4□□□□□ -2.19
SEMA4CQ9C0C4 AC109327.2-201ENST00000448339 378 ntBASIC1.4□□□□□ -2.19
SEMA4CQ9C0C4 RNU7-137P-201ENST00000516788 62 ntBASIC1.4□□□□□ -2.19
SEMA4CQ9C0C4 SNORA31.24-201ENST00000517232 57 ntBASIC1.4□□□□□ -2.19
SEMA4CQ9C0C4 MIR3937-201ENST00000580135 106 ntBASIC1.4□□□□□ -2.19
SEMA4CQ9C0C4 MIR4777-201ENST00000583710 86 ntBASIC1.4□□□□□ -2.19
SEMA4CQ9C0C4 AL442128.1-201ENST00000615151 90 ntBASIC1.4□□□□□ -2.19
SEMA4CQ9C0C4 ZNF654-201ENST00000309495 4957 ntAPPRIS P2 TSL 1 (best) BASIC1.39□□□□□ -2.19
SEMA4CQ9C0C4 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC1.39□□□□□ -2.19
SEMA4CQ9C0C4 Y_RNA.30-201ENST00000362572 97 ntBASIC1.39□□□□□ -2.19
SEMA4CQ9C0C4 Y_RNA.93-201ENST00000363066 109 ntBASIC1.39□□□□□ -2.19
SEMA4CQ9C0C4 Y_RNA.290-201ENST00000364879 114 ntBASIC1.39□□□□□ -2.19
SEMA4CQ9C0C4 RNU6ATAC2P-201ENST00000387943 126 ntBASIC1.39□□□□□ -2.19
SEMA4CQ9C0C4 RNU6ATAC42P-201ENST00000408637 95 ntBASIC1.39□□□□□ -2.19
SEMA4CQ9C0C4 RNA5SP436-201ENST00000516020 115 ntBASIC1.39□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 182 ms