Protein–RNA interactions for Protein: Q9BYR4

KRTAP4-3, Keratin-associated protein 4-3, humanhuman

Predictions only

Length 195 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP4-3Q9BYR4 RNU6-1043P-201ENST00000410355 99 ntBASIC0.94□□□□□ -2.26
KRTAP4-3Q9BYR4 RNU2-37P-201ENST00000410695 177 ntBASIC0.94□□□□□ -2.26
KRTAP4-3Q9BYR4 RNU6-1267P-201ENST00000410747 107 ntBASIC0.94□□□□□ -2.26
KRTAP4-3Q9BYR4 AC123900.1-201ENST00000420390 96 ntBASIC0.94□□□□□ -2.26
KRTAP4-3Q9BYR4 AL592431.2-201ENST00000422198 171 ntTSL 3 BASIC0.94□□□□□ -2.26
KRTAP4-3Q9BYR4 CYP2C59P-201ENST00000457790 269 ntBASIC0.94□□□□□ -2.26
KRTAP4-3Q9BYR4 snoU13.26-201ENST00000459452 105 ntBASIC0.94□□□□□ -2.26
KRTAP4-3Q9BYR4 AC008413.1-201ENST00000511864 177 ntBASIC0.94□□□□□ -2.26
KRTAP4-3Q9BYR4 RNA5SP445-201ENST00000515889 115 ntBASIC0.94□□□□□ -2.26
KRTAP4-3Q9BYR4 RNU6-667P-201ENST00000517186 102 ntBASIC0.94□□□□□ -2.26
KRTAP4-3Q9BYR4 CERS3-AS1-201ENST00000560643 372 ntTSL 3 BASIC0.94□□□□□ -2.26
KRTAP4-3Q9BYR4 MIR548AO-201ENST00000579992 96 ntBASIC0.94□□□□□ -2.26
KRTAP4-3Q9BYR4 MIR548AG2-201ENST00000581228 64 ntBASIC0.94□□□□□ -2.26
KRTAP4-3Q9BYR4 AC006111.3-201ENST00000622137 383 ntBASIC0.94□□□□□ -2.26
KRTAP4-3Q9BYR4 AC008133.2-201ENST00000624540 351 ntBASIC0.94□□□□□ -2.26
KRTAP4-3Q9BYR4 SLC8A1-AS1-230ENST00000627538 212 ntTSL 5 BASIC0.94□□□□□ -2.26
KRTAP4-3Q9BYR4 MIR1248-201ENST00000629190 106 ntBASIC0.94□□□□□ -2.26
KRTAP4-3Q9BYR4 NUFIP2-201ENST00000225388 10850 ntAPPRIS P1 TSL 1 (best) BASIC0.94□□□□□ -2.26
KRTAP4-3Q9BYR4 ERBIN-204ENST00000380943 6410 ntAPPRIS P3 TSL 1 (best) BASIC0.94□□□□□ -2.26
KRTAP4-3Q9BYR4 ROCK2-203ENST00000401753 4017 ntTSL 1 (best) BASIC0.94□□□□□ -2.26
KRTAP4-3Q9BYR4 ANKRD30A-202ENST00000374660 4762 ntAPPRIS ALT2 TSL 5 BASIC0.94□□□□□ -2.26
KRTAP4-3Q9BYR4 SYT14-201ENST00000367015 5094 ntAPPRIS ALT2 TSL 1 (best) BASIC0.94□□□□□ -2.26
KRTAP4-3Q9BYR4 FGF7-201ENST00000267843 5467 ntAPPRIS P1 TSL 1 (best) BASIC0.94□□□□□ -2.26
KRTAP4-3Q9BYR4 NEDD4-208ENST00000508342 7235 ntTSL 1 (best) BASIC0.94□□□□□ -2.26
KRTAP4-3Q9BYR4 ECT2-204ENST00000392692 4158 ntTSL 1 (best) BASIC0.93□□□□□ -2.26
KRTAP4-3Q9BYR4 ZBTB6-201ENST00000373659 4106 ntAPPRIS P1 TSL 1 (best) BASIC0.93□□□□□ -2.26
KRTAP4-3Q9BYR4 WDR72-201ENST00000360509 5887 ntAPPRIS P2 TSL 1 (best) BASIC0.93□□□□□ -2.26
KRTAP4-3Q9BYR4 FRS2-201ENST00000397997 6550 ntAPPRIS P1 TSL 5 BASIC0.93□□□□□ -2.26
KRTAP4-3Q9BYR4 HFM1-201ENST00000370425 4931 ntAPPRIS P1 TSL 1 (best) BASIC0.93□□□□□ -2.26
KRTAP4-3Q9BYR4 TDRD15-202ENST00000622654 5805 ntAPPRIS P1 BASIC0.93□□□□□ -2.26
KRTAP4-3Q9BYR4 MEI4-201ENST00000602452 4800 ntAPPRIS P1 TSL 5 BASIC0.93□□□□□ -2.26
KRTAP4-3Q9BYR4 Y_RNA.382-201ENST00000365672 114 ntBASIC0.93□□□□□ -2.26
KRTAP4-3Q9BYR4 Y_RNA.407-201ENST00000383986 113 ntBASIC0.93□□□□□ -2.26
KRTAP4-3Q9BYR4 MIR124-3-201ENST00000384866 87 ntBASIC0.93□□□□□ -2.26
KRTAP4-3Q9BYR4 RNA5SP212-201ENST00000391223 107 ntBASIC0.93□□□□□ -2.26
KRTAP4-3Q9BYR4 RNA5SP184-201ENST00000411071 108 ntBASIC0.93□□□□□ -2.26
KRTAP4-3Q9BYR4 AC068295.1-201ENST00000413056 153 ntTSL 3 BASIC0.93□□□□□ -2.26
KRTAP4-3Q9BYR4 UQCRHP3-201ENST00000451503 251 ntBASIC0.93□□□□□ -2.26
KRTAP4-3Q9BYR4 AL354710.1-201ENST00000453641 246 ntBASIC0.93□□□□□ -2.26
KRTAP4-3Q9BYR4 AP004217.1-201ENST00000480579 346 ntBASIC0.93□□□□□ -2.26
KRTAP4-3Q9BYR4 SNORD63.2-201ENST00000516303 64 ntBASIC0.93□□□□□ -2.26
KRTAP4-3Q9BYR4 RNA5SP148-201ENST00000516527 94 ntBASIC0.93□□□□□ -2.26
KRTAP4-3Q9BYR4 RN7SKP234-201ENST00000517173 224 ntBASIC0.93□□□□□ -2.26
KRTAP4-3Q9BYR4 CYP3A54P-201ENST00000566950 75 ntBASIC0.93□□□□□ -2.26
KRTAP4-3Q9BYR4 DLEU2_6.1-201ENST00000610536 112 ntBASIC0.93□□□□□ -2.26
KRTAP4-3Q9BYR4 AC073476.4-201ENST00000628409 72 ntBASIC0.93□□□□□ -2.26
KRTAP4-3Q9BYR4 HERC4-201ENST00000277817 4371 ntTSL 1 (best) BASIC0.93□□□□□ -2.26
KRTAP4-3Q9BYR4 CCPG1-203ENST00000442196 3453 ntAPPRIS P1 TSL 2 BASIC0.93□□□□□ -2.26
KRTAP4-3Q9BYR4 SLC16A10-201ENST00000368850 10051 ntTSL 1 (best) BASIC0.93□□□□□ -2.26
KRTAP4-3Q9BYR4 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC0.93□□□□□ -2.26
KRTAP4-3Q9BYR4 SENP7-207ENST00000394095 4945 ntAPPRIS P3 TSL 1 (best) BASIC0.93□□□□□ -2.26
KRTAP4-3Q9BYR4 MAPK10-353ENST00000641803 8483 ntAPPRIS P2 BASIC0.93□□□□□ -2.26
KRTAP4-3Q9BYR4 STAU2-207ENST00000519961 3928 ntTSL 1 (best) BASIC0.93□□□□□ -2.26
KRTAP4-3Q9BYR4 RGPD1-202ENST00000409776 6692 ntAPPRIS ALT2 TSL 1 (best) BASIC0.92□□□□□ -2.26
KRTAP4-3Q9BYR4 SLC39A10-201ENST00000359634 5322 ntAPPRIS P1 TSL 1 (best) BASIC0.92□□□□□ -2.26
KRTAP4-3Q9BYR4 CCDC68-202ENST00000432185 4014 ntAPPRIS P1 TSL 1 (best) BASIC0.92□□□□□ -2.26
KRTAP4-3Q9BYR4 HDX-201ENST00000297977 6200 ntAPPRIS P1 TSL 1 (best) BASIC0.92□□□□□ -2.26
KRTAP4-3Q9BYR4 ADGRG4-201ENST00000370652 9820 ntAPPRIS P2 TSL 5 BASIC0.92□□□□□ -2.26
KRTAP4-3Q9BYR4 RNU6-836P-201ENST00000362920 107 ntBASIC0.92□□□□□ -2.26
KRTAP4-3Q9BYR4 RNA5SP68-201ENST00000363885 119 ntBASIC0.92□□□□□ -2.26
KRTAP4-3Q9BYR4 SNORD28-201ENST00000384706 75 ntBASIC0.92□□□□□ -2.26
KRTAP4-3Q9BYR4 MIR526A1-201ENST00000384897 85 ntBASIC0.92□□□□□ -2.26
KRTAP4-3Q9BYR4 MIR512-1-201ENST00000384913 84 ntBASIC0.92□□□□□ -2.26
KRTAP4-3Q9BYR4 MIR519A2-201ENST00000384990 87 ntBASIC0.92□□□□□ -2.26
KRTAP4-3Q9BYR4 MIR643-201ENST00000385267 97 ntBASIC0.92□□□□□ -2.26
KRTAP4-3Q9BYR4 RNA5SP210-201ENST00000391034 120 ntBASIC0.92□□□□□ -2.26
KRTAP4-3Q9BYR4 RNA5SP274-201ENST00000410484 108 ntBASIC0.92□□□□□ -2.26
KRTAP4-3Q9BYR4 CST2P1-201ENST00000425770 87 ntBASIC0.92□□□□□ -2.26
KRTAP4-3Q9BYR4 RNU6-237P-201ENST00000515985 71 ntBASIC0.92□□□□□ -2.26
KRTAP4-3Q9BYR4 RNU6-965P-201ENST00000516721 96 ntBASIC0.92□□□□□ -2.26
KRTAP4-3Q9BYR4 AC013244.2-201ENST00000603396 103 ntBASIC0.92□□□□□ -2.26
KRTAP4-3Q9BYR4 MIR6817-201ENST00000615588 66 ntBASIC0.92□□□□□ -2.26
KRTAP4-3Q9BYR4 MIR6740-201ENST00000618268 113 ntBASIC0.92□□□□□ -2.26
KRTAP4-3Q9BYR4 HS1BP3-208ENST00000631166 78 ntTSL 5 BASIC0.92□□□□□ -2.26
KRTAP4-3Q9BYR4 THNSL1-201ENST00000376356 3691 ntAPPRIS P1 TSL 1 (best) BASIC0.92□□□□□ -2.26
KRTAP4-3Q9BYR4 USH2A-201ENST00000307340 18883 ntAPPRIS P1 TSL 1 (best) BASIC0.92□□□□□ -2.26
KRTAP4-3Q9BYR4 ZMYM1-201ENST00000359858 4175 ntAPPRIS P1 TSL 1 (best) BASIC0.92□□□□□ -2.26
KRTAP4-3Q9BYR4 PRKACB-207ENST00000394838 4294 ntTSL 5 BASIC0.92□□□□□ -2.26
KRTAP4-3Q9BYR4 NBPF20-201ENST00000369373 18760 ntAPPRIS ALT2 TSL 5 BASIC0.92□□□□□ -2.26
KRTAP4-3Q9BYR4 SYCP2-202ENST00000371001 5479 ntAPPRIS P2 TSL 1 (best) BASIC0.92□□□□□ -2.26
KRTAP4-3Q9BYR4 BRIP1-202ENST00000577598 3969 ntAPPRIS ALT2 TSL 5 BASIC0.91□□□□□ -2.26
KRTAP4-3Q9BYR4 WHAMMP2-201ENST00000512149 5482 ntTSL 5 BASIC0.91□□□□□ -2.26
KRTAP4-3Q9BYR4 ASPM-202ENST00000367408 3747 ntTSL 1 (best) BASIC0.91□□□□□ -2.26
KRTAP4-3Q9BYR4 RNU1-124P-201ENST00000363861 145 ntBASIC0.91□□□□□ -2.26
KRTAP4-3Q9BYR4 Y_RNA.260-201ENST00000364628 101 ntBASIC0.91□□□□□ -2.26
KRTAP4-3Q9BYR4 Y_RNA.321-201ENST00000365149 102 ntBASIC0.91□□□□□ -2.26
KRTAP4-3Q9BYR4 MIR124-1-201ENST00000385275 85 ntBASIC0.91□□□□□ -2.26
KRTAP4-3Q9BYR4 MT-TF-201ENST00000387314 71 ntBASIC0.91□□□□□ -2.26
KRTAP4-3Q9BYR4 TRAJ26-201ENST00000390511 60 ntAPPRIS P1 BASIC0.91□□□□□ -2.26
KRTAP4-3Q9BYR4 RNU6-220P-201ENST00000390919 107 ntBASIC0.91□□□□□ -2.26
KRTAP4-3Q9BYR4 RNA5SP109-201ENST00000391010 116 ntBASIC0.91□□□□□ -2.26
KRTAP4-3Q9BYR4 SNORA11.4-201ENST00000408823 129 ntBASIC0.91□□□□□ -2.26
KRTAP4-3Q9BYR4 RNA5SP266-201ENST00000410273 108 ntBASIC0.91□□□□□ -2.26
KRTAP4-3Q9BYR4 RNA5SP296-201ENST00000410523 111 ntBASIC0.91□□□□□ -2.26
KRTAP4-3Q9BYR4 AC002429.1-201ENST00000437672 148 ntBASIC0.91□□□□□ -2.26
KRTAP4-3Q9BYR4 AC011753.1-201ENST00000451001 220 ntBASIC0.91□□□□□ -2.26
KRTAP4-3Q9BYR4 AC006539.3-201ENST00000454258 129 ntBASIC0.91□□□□□ -2.26
KRTAP4-3Q9BYR4 AC067940.1-201ENST00000458411 300 ntBASIC0.91□□□□□ -2.26
KRTAP4-3Q9BYR4 AC108210.2-201ENST00000503681 201 ntBASIC0.91□□□□□ -2.26
KRTAP4-3Q9BYR4 RNU7-12P-201ENST00000516030 62 ntBASIC0.91□□□□□ -2.26
Retrieved 100 of 98,524 protein–RNA pairs in 105.6 ms