Protein–RNA interactions for Protein: Q96II8

LRCH3, Leucine-rich repeat and calponin homology domain-containing protein 3, humanhuman

Predictions only

Length 777 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3Q96II8 PRKG1-205ENST00000401604 5922 ntTSL 5 BASIC2.96□□□□□ -1.94
LRCH3Q96II8 KCNIP4-IT1-201ENST00000627566 9848 ntBASIC2.95□□□□□ -1.94
LRCH3Q96II8 RNA5SP48-201ENST00000363969 126 ntBASIC2.95□□□□□ -1.94
LRCH3Q96II8 TRAJ50-201ENST00000390487 60 ntAPPRIS P1 BASIC2.95□□□□□ -1.94
LRCH3Q96II8 AP004217.1-201ENST00000480579 346 ntBASIC2.95□□□□□ -1.94
LRCH3Q96II8 RNU6-531P-201ENST00000516694 104 ntBASIC2.95□□□□□ -1.94
LRCH3Q96II8 MIR4498-201ENST00000577599 66 ntBASIC2.95□□□□□ -1.94
LRCH3Q96II8 MIR3675-201ENST00000583661 73 ntBASIC2.95□□□□□ -1.94
LRCH3Q96II8 RNU6-681P-201ENST00000364012 104 ntBASIC2.94□□□□□ -1.94
LRCH3Q96II8 RNU6-1165P-201ENST00000410119 107 ntBASIC2.94□□□□□ -1.94
LRCH3Q96II8 RNA5SP274-201ENST00000410484 108 ntBASIC2.94□□□□□ -1.94
LRCH3Q96II8 SNORD111.1-201ENST00000516421 86 ntBASIC2.94□□□□□ -1.94
LRCH3Q96II8 MBNL3-205ENST00000370857 8760 ntTSL 5 BASIC2.93□□□□□ -1.94
LRCH3Q96II8 MIR653-201ENST00000385279 96 ntBASIC2.93□□□□□ -1.94
LRCH3Q96II8 MIR1302-7-201ENST00000408841 72 ntBASIC2.93□□□□□ -1.94
LRCH3Q96II8 RN7SL633P-201ENST00000488974 297 ntBASIC2.93□□□□□ -1.94
LRCH3Q96II8 SNORA31.15-201ENST00000516771 132 ntBASIC2.93□□□□□ -1.94
LRCH3Q96II8 RNU6-881P-201ENST00000516813 102 ntBASIC2.93□□□□□ -1.94
LRCH3Q96II8 KIAA1107-202ENST00000636278 4065 ntAPPRIS P1 TSL 5 BASIC2.92□□□□□ -1.94
LRCH3Q96II8 RNU6-1123P-201ENST00000362347 106 ntBASIC2.92□□□□□ -1.94
LRCH3Q96II8 MIR7-2-201ENST00000384970 110 ntBASIC2.92□□□□□ -1.94
LRCH3Q96II8 AL606490.4-201ENST00000423117 127 ntBASIC2.92□□□□□ -1.94
LRCH3Q96II8 AL731684.2-201ENST00000426839 333 ntTSL 5 BASIC2.92□□□□□ -1.94
LRCH3Q96II8 AC092427.1-202ENST00000430569 476 ntBASIC2.92□□□□□ -1.94
LRCH3Q96II8 RNU6-322P-201ENST00000516010 103 ntBASIC2.92□□□□□ -1.94
LRCH3Q96II8 SNORA25.16-201ENST00000516741 121 ntBASIC2.92□□□□□ -1.94
LRCH3Q96II8 MIR4511-201ENST00000582784 87 ntBASIC2.92□□□□□ -1.94
LRCH3Q96II8 MIR3140-201ENST00000583685 90 ntBASIC2.92□□□□□ -1.94
LRCH3Q96II8 VPS35-212ENST00000640313 141 ntTSL 5 BASIC2.92□□□□□ -1.94
LRCH3Q96II8 USP45-208ENST00000500704 5826 ntAPPRIS P1 TSL 5 BASIC2.91□□□□□ -1.94
LRCH3Q96II8 RNY4P3-201ENST00000365254 95 ntBASIC2.91□□□□□ -1.94
LRCH3Q96II8 U8.13-201ENST00000390842 128 ntBASIC2.91□□□□□ -1.94
LRCH3Q96II8 Y_RNA.606-201ENST00000410579 103 ntBASIC2.91□□□□□ -1.94
LRCH3Q96II8 HMGN2P35-201ENST00000412164 270 ntBASIC2.91□□□□□ -1.94
LRCH3Q96II8 RPS29P6-201ENST00000438196 145 ntBASIC2.91□□□□□ -1.94
LRCH3Q96II8 RNA5SP385-201ENST00000515947 110 ntBASIC2.91□□□□□ -1.94
LRCH3Q96II8 RNU11-2P-201ENST00000516898 142 ntBASIC2.91□□□□□ -1.94
LRCH3Q96II8 RNU2-19P-201ENST00000517288 84 ntBASIC2.91□□□□□ -1.94
LRCH3Q96II8 COMMD6-213ENST00000626103 120 ntTSL 5 BASIC2.91□□□□□ -1.94
LRCH3Q96II8 CREBRF-201ENST00000296953 7778 ntAPPRIS P1 TSL 1 (best) BASIC2.91□□□□□ -1.94
LRCH3Q96II8 OR51A4-202ENST00000641898 4393 ntAPPRIS P1 BASIC2.91□□□□□ -1.94
LRCH3Q96II8 CACNB4-238ENST00000636901 7706 ntTSL 5 BASIC2.91□□□□□ -1.94
LRCH3Q96II8 LTN1-201ENST00000361371 7685 ntAPPRIS P1 TSL 1 (best) BASIC2.91□□□□□ -1.94
LRCH3Q96II8 RNU4-58P-201ENST00000363192 141 ntBASIC2.9□□□□□ -1.95
LRCH3Q96II8 Y_RNA.239-201ENST00000364444 113 ntBASIC2.9□□□□□ -1.95
LRCH3Q96II8 SNORD115-22-201ENST00000364456 82 ntBASIC2.9□□□□□ -1.95
LRCH3Q96II8 RNU6-203P-201ENST00000384038 104 ntBASIC2.9□□□□□ -1.95
LRCH3Q96II8 SNORD116-24-201ENST00000384549 92 ntBASIC2.9□□□□□ -1.95
LRCH3Q96II8 MIR633-201ENST00000384821 98 ntBASIC2.9□□□□□ -1.95
LRCH3Q96II8 RNU7-195P-201ENST00000458793 62 ntBASIC2.9□□□□□ -1.95
LRCH3Q96II8 MIR4264-201ENST00000583520 66 ntBASIC2.9□□□□□ -1.95
LRCH3Q96II8 AL627230.6-201ENST00000611129 280 ntBASIC2.9□□□□□ -1.95
LRCH3Q96II8 uc_338.6-201ENST00000613544 171 ntBASIC2.9□□□□□ -1.95
LRCH3Q96II8 TRDV1-202ENST00000621643 102 ntBASIC2.9□□□□□ -1.95
LRCH3Q96II8 AC103706.3-201ENST00000636297 85 ntBASIC2.9□□□□□ -1.95
LRCH3Q96II8 ZBBX-205ENST00000455345 3185 ntAPPRIS ALT2 TSL 1 (best) BASIC2.9□□□□□ -1.95
LRCH3Q96II8 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC2.9□□□□□ -1.95
LRCH3Q96II8 SNORD45.1-201ENST00000363181 77 ntBASIC2.89□□□□□ -1.95
LRCH3Q96II8 RNU6-614P-201ENST00000384369 107 ntBASIC2.89□□□□□ -1.95
LRCH3Q96II8 Z96811.1-201ENST00000445880 108 ntBASIC2.89□□□□□ -1.95
LRCH3Q96II8 MIR4491-201ENST00000581087 68 ntBASIC2.89□□□□□ -1.95
LRCH3Q96II8 MIR4506-201ENST00000584693 77 ntBASIC2.89□□□□□ -1.95
LRCH3Q96II8 MIR3192-201ENST00000584920 77 ntBASIC2.89□□□□□ -1.95
LRCH3Q96II8 MIR8053-201ENST00000613344 75 ntBASIC2.89□□□□□ -1.95
LRCH3Q96II8 U6.59-201ENST00000615686 107 ntBASIC2.89□□□□□ -1.95
LRCH3Q96II8 CLLU1-201ENST00000378485 3897 ntAPPRIS P1 TSL 1 (best) BASIC2.89□□□□□ -1.95
LRCH3Q96II8 GRAMD1C-202ENST00000440446 3475 ntTSL 1 (best) BASIC2.88□□□□□ -1.95
LRCH3Q96II8 FTX-214ENST00000638437 12267 ntTSL 5 BASIC2.88□□□□□ -1.95
LRCH3Q96II8 RNU6-53P-201ENST00000365367 106 ntBASIC2.88□□□□□ -1.95
LRCH3Q96II8 RNU6-396P-201ENST00000365369 105 ntBASIC2.88□□□□□ -1.95
LRCH3Q96II8 MT-TF-201ENST00000387314 71 ntBASIC2.88□□□□□ -1.95
LRCH3Q96II8 TRAJ30-201ENST00000390507 57 ntAPPRIS P1 BASIC2.88□□□□□ -1.95
LRCH3Q96II8 RPS27P16-201ENST00000425758 201 ntBASIC2.88□□□□□ -1.95
LRCH3Q96II8 AL356320.1-201ENST00000429616 163 ntBASIC2.88□□□□□ -1.95
LRCH3Q96II8 GHRL-208ENST00000439975 326 ntTSL 1 (best) BASIC2.88□□□□□ -1.95
LRCH3Q96II8 RNU7-62P-201ENST00000458856 62 ntBASIC2.88□□□□□ -1.95
LRCH3Q96II8 TRAJ51-201ENST00000504127 63 ntBASIC2.88□□□□□ -1.95
LRCH3Q96II8 RNA5SP320-201ENST00000516263 124 ntBASIC2.88□□□□□ -1.95
LRCH3Q96II8 SNORA9.3-201ENST00000516383 129 ntBASIC2.88□□□□□ -1.95
LRCH3Q96II8 SNORA31.26-201ENST00000517250 137 ntBASIC2.88□□□□□ -1.95
LRCH3Q96II8 MIR5089-201ENST00000580047 84 ntBASIC2.88□□□□□ -1.95
LRCH3Q96II8 TXLNGY-201ENST00000253320 7299 ntTSL 2 BASIC2.88□□□□□ -1.95
LRCH3Q96II8 SNORD100-201ENST00000408573 76 ntBASIC2.87□□□□□ -1.95
LRCH3Q96II8 AC110620.1-201ENST00000416042 228 ntBASIC2.87□□□□□ -1.95
LRCH3Q96II8 AC079150.2-201ENST00000443733 78 ntBASIC2.87□□□□□ -1.95
LRCH3Q96II8 MIR1273D-201ENST00000577266 86 ntBASIC2.87□□□□□ -1.95
LRCH3Q96II8 NEBL-202ENST00000377122 9216 ntTSL 1 (best) BASIC2.86□□□□□ -1.95
LRCH3Q96II8 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC2.86□□□□□ -1.95
LRCH3Q96II8 Y_RNA.588-201ENST00000391254 102 ntBASIC2.86□□□□□ -1.95
LRCH3Q96II8 RNA5SP100-201ENST00000410903 110 ntBASIC2.86□□□□□ -1.95
LRCH3Q96II8 RNA5SP59-201ENST00000410922 110 ntBASIC2.86□□□□□ -1.95
LRCH3Q96II8 5S_rRNA.3-201ENST00000517021 110 ntBASIC2.86□□□□□ -1.95
LRCH3Q96II8 AC034238.1-213ENST00000611148 150 ntTSL 5 BASIC2.86□□□□□ -1.95
LRCH3Q96II8 5S_rRNA.19-201ENST00000612131 110 ntBASIC2.86□□□□□ -1.95
LRCH3Q96II8 TRAJ37-201ENST00000612375 65 ntAPPRIS P1 BASIC2.86□□□□□ -1.95
LRCH3Q96II8 U6.81-201ENST00000612550 106 ntBASIC2.86□□□□□ -1.95
LRCH3Q96II8 TRAJ36-201ENST00000614481 58 ntAPPRIS P1 BASIC2.86□□□□□ -1.95
LRCH3Q96II8 5S_rRNA.18-201ENST00000621941 110 ntBASIC2.86□□□□□ -1.95
LRCH3Q96II8 MIPOL1-203ENST00000537471 5954 ntAPPRIS P1 TSL 5 BASIC2.86□□□□□ -1.95
LRCH3Q96II8 RNU6-664P-201ENST00000362381 107 ntBASIC2.85□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 169.5 ms