Protein–RNA interactions for Protein: Q92994

BRF1, Transcription factor IIIB 90 kDa subunit, humanhuman

Predictions only

Length 677 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1Q92994 AL591806.2-201ENST00000433122 173 ntBASIC1.78□□□□□ -2.12
BRF1Q92994 RNU6-902P-201ENST00000517212 91 ntBASIC1.78□□□□□ -2.12
BRF1Q92994 KTN1-205ENST00000395314 4618 ntAPPRIS P4 TSL 1 (best) BASIC1.78□□□□□ -2.13
BRF1Q92994 MIR30D-201ENST00000362283 70 ntBASIC1.77□□□□□ -2.13
BRF1Q92994 Y_RNA.96-201ENST00000363092 109 ntBASIC1.77□□□□□ -2.13
BRF1Q92994 RNU6-865P-201ENST00000364772 107 ntBASIC1.77□□□□□ -2.13
BRF1Q92994 MIR34C-201ENST00000384831 77 ntBASIC1.77□□□□□ -2.13
BRF1Q92994 RPS27P16-201ENST00000425758 201 ntBASIC1.77□□□□□ -2.13
BRF1Q92994 RNU7-48P-201ENST00000458875 63 ntBASIC1.77□□□□□ -2.13
BRF1Q92994 RNU6-548P-201ENST00000517083 115 ntBASIC1.77□□□□□ -2.13
BRF1Q92994 AC024382.1-201ENST00000520224 292 ntTSL 3 BASIC1.77□□□□□ -2.13
BRF1Q92994 MIR4777-201ENST00000583710 86 ntBASIC1.77□□□□□ -2.13
BRF1Q92994 MIR4298-201ENST00000584380 73 ntBASIC1.77□□□□□ -2.13
BRF1Q92994 MIR376B-201ENST00000614515 100 ntBASIC1.77□□□□□ -2.13
BRF1Q92994 AC105081.1-201ENST00000617727 106 ntBASIC1.77□□□□□ -2.13
BRF1Q92994 Y_RNA.140-201ENST00000363474 103 ntBASIC1.76□□□□□ -2.13
BRF1Q92994 RNU6-60P-201ENST00000364792 103 ntBASIC1.76□□□□□ -2.13
BRF1Q92994 RNU6-1131P-201ENST00000364955 107 ntBASIC1.76□□□□□ -2.13
BRF1Q92994 Y_RNA.342-201ENST00000365352 113 ntBASIC1.76□□□□□ -2.13
BRF1Q92994 RNU6ATAC42P-201ENST00000408637 95 ntBASIC1.76□□□□□ -2.13
BRF1Q92994 RNU6-1165P-201ENST00000410119 107 ntBASIC1.76□□□□□ -2.13
BRF1Q92994 RNU7-62P-201ENST00000458856 62 ntBASIC1.76□□□□□ -2.13
BRF1Q92994 RNU6-795P-201ENST00000516323 103 ntBASIC1.76□□□□□ -2.13
BRF1Q92994 SNORA4-201ENST00000584302 138 ntBASIC1.76□□□□□ -2.13
BRF1Q92994 AL645939.4-201ENST00000604495 135 ntBASIC1.76□□□□□ -2.13
BRF1Q92994 MALAT1.1-201ENST00000618249 95 ntBASIC1.76□□□□□ -2.13
BRF1Q92994 MIR4679-1-201ENST00000637619 75 ntBASIC1.76□□□□□ -2.13
BRF1Q92994 Y_RNA.220-201ENST00000364244 109 ntBASIC1.75□□□□□ -2.13
BRF1Q92994 MIR517C-201ENST00000385103 95 ntBASIC1.75□□□□□ -2.13
BRF1Q92994 MT-TF-201ENST00000387314 71 ntBASIC1.75□□□□□ -2.13
BRF1Q92994 RNU6-205P-201ENST00000390858 107 ntBASIC1.75□□□□□ -2.13
BRF1Q92994 AC023790.1-201ENST00000482174 347 ntBASIC1.75□□□□□ -2.13
BRF1Q92994 Y_RNA.659-201ENST00000515994 113 ntBASIC1.75□□□□□ -2.13
BRF1Q92994 SNORD53B-201ENST00000577887 78 ntBASIC1.75□□□□□ -2.13
BRF1Q92994 AC091304.10-201ENST00000641554 121 ntBASIC1.75□□□□□ -2.13
BRF1Q92994 RNU1-17P-201ENST00000363022 152 ntBASIC1.74□□□□□ -2.13
BRF1Q92994 Y_RNA.247-201ENST00000364500 92 ntBASIC1.74□□□□□ -2.13
BRF1Q92994 RNY1P2-201ENST00000364820 117 ntBASIC1.74□□□□□ -2.13
BRF1Q92994 RNU6-49P-201ENST00000384256 107 ntBASIC1.74□□□□□ -2.13
BRF1Q92994 RPS29P28-201ENST00000446439 141 ntBASIC1.74□□□□□ -2.13
BRF1Q92994 AC133485.1-201ENST00000567176 124 ntBASIC1.74□□□□□ -2.13
BRF1Q92994 AP001362.1-201ENST00000625165 124 ntBASIC1.74□□□□□ -2.13
BRF1Q92994 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC1.74□□□□□ -2.13
BRF1Q92994 Y_RNA.168-201ENST00000363740 102 ntBASIC1.73□□□□□ -2.13
BRF1Q92994 RNU1-42P-201ENST00000364033 160 ntBASIC1.73□□□□□ -2.13
BRF1Q92994 RNU6-654P-201ENST00000364373 107 ntBASIC1.73□□□□□ -2.13
BRF1Q92994 AL354695.1-201ENST00000427935 228 ntBASIC1.73□□□□□ -2.13
BRF1Q92994 SEPT14P17-201ENST00000617978 177 ntBASIC1.73□□□□□ -2.13
BRF1Q92994 RNU6-294P-201ENST00000364999 102 ntBASIC1.72□□□□□ -2.13
BRF1Q92994 SNORD38.2-201ENST00000384470 69 ntBASIC1.72□□□□□ -2.13
BRF1Q92994 SNORA67.6-201ENST00000391093 99 ntBASIC1.72□□□□□ -2.13
BRF1Q92994 RNU6-644P-201ENST00000391155 98 ntBASIC1.72□□□□□ -2.13
BRF1Q92994 MRPL35P3-201ENST00000421557 364 ntBASIC1.72□□□□□ -2.13
BRF1Q92994 RNU7-61P-201ENST00000515897 61 ntBASIC1.72□□□□□ -2.13
BRF1Q92994 RN7SKP88-201ENST00000516847 250 ntBASIC1.72□□□□□ -2.13
BRF1Q92994 MIR4303-201ENST00000581299 66 ntBASIC1.72□□□□□ -2.13
BRF1Q92994 MIR548Z-201ENST00000584743 97 ntBASIC1.72□□□□□ -2.13
BRF1Q92994 7SK.8-201ENST00000612110 250 ntBASIC1.72□□□□□ -2.13
BRF1Q92994 7SK.11-201ENST00000615477 250 ntBASIC1.72□□□□□ -2.13
BRF1Q92994 7SK.13-201ENST00000622040 250 ntBASIC1.72□□□□□ -2.13
BRF1Q92994 ZGRF1-203ENST00000445203 6529 ntAPPRIS P1 TSL 5 BASIC1.71□□□□□ -2.14
BRF1Q92994 MIR18B-201ENST00000454574 71 ntBASIC1.71□□□□□ -2.14
BRF1Q92994 Y_RNA.705-201ENST00000516862 110 ntBASIC1.71□□□□□ -2.14
BRF1Q92994 RNU6-844P-201ENST00000517175 102 ntBASIC1.71□□□□□ -2.14
BRF1Q92994 ANGPTL3-201ENST00000371129 2805 ntAPPRIS P1 TSL 1 (best) BASIC1.71□□□□□ -2.14
BRF1Q92994 RNU6-1163P-201ENST00000364516 107 ntBASIC1.7□□□□□ -2.14
BRF1Q92994 U8.15-201ENST00000390947 134 ntBASIC1.7□□□□□ -2.14
BRF1Q92994 RNU6-972P-201ENST00000391208 107 ntBASIC1.7□□□□□ -2.14
BRF1Q92994 MIR548G-201ENST00000408442 89 ntBASIC1.7□□□□□ -2.14
BRF1Q92994 AC109327.2-201ENST00000448339 378 ntBASIC1.7□□□□□ -2.14
BRF1Q92994 AC048334.1-201ENST00000477975 159 ntBASIC1.7□□□□□ -2.14
BRF1Q92994 RNA5SP61-201ENST00000516453 100 ntBASIC1.7□□□□□ -2.14
BRF1Q92994 SNORA31.24-201ENST00000517232 57 ntBASIC1.7□□□□□ -2.14
BRF1Q92994 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC1.7□□□□□ -2.14
BRF1Q92994 RNU6-90P-201ENST00000606352 106 ntBASIC1.7□□□□□ -2.14
BRF1Q92994 uc_338.6-201ENST00000613544 171 ntBASIC1.7□□□□□ -2.14
BRF1Q92994 NFIA-AS1-206ENST00000630199 220 ntTSL 5 BASIC1.7□□□□□ -2.14
BRF1Q92994 AC008163.1-202ENST00000636004 2889 ntBASIC1.69□□□□□ -2.14
BRF1Q92994 HSBP1P2-201ENST00000299671 229 ntBASIC1.69□□□□□ -2.14
BRF1Q92994 Y_RNA.290-201ENST00000364879 114 ntBASIC1.69□□□□□ -2.14
BRF1Q92994 Y_RNA.467-201ENST00000384297 102 ntBASIC1.69□□□□□ -2.14
BRF1Q92994 RNU6-813P-201ENST00000384691 107 ntBASIC1.69□□□□□ -2.14
BRF1Q92994 SNORA17.3-201ENST00000391159 129 ntBASIC1.69□□□□□ -2.14
BRF1Q92994 RNA5SP95-201ENST00000410319 137 ntBASIC1.69□□□□□ -2.14
BRF1Q92994 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC1.69□□□□□ -2.14
BRF1Q92994 MIR7843-201ENST00000622274 79 ntBASIC1.69□□□□□ -2.14
BRF1Q92994 Y_RNA.558-201ENST00000384685 113 ntBASIC1.68□□□□□ -2.14
BRF1Q92994 RNY1P7-201ENST00000384743 110 ntBASIC1.68□□□□□ -2.14
BRF1Q92994 TRAJ1-201ENST00000390536 62 ntAPPRIS P1 BASIC1.68□□□□□ -2.14
BRF1Q92994 SNORA67.5-201ENST00000391036 107 ntBASIC1.68□□□□□ -2.14
BRF1Q92994 RNU6-887P-201ENST00000410660 100 ntBASIC1.68□□□□□ -2.14
BRF1Q92994 COX7A2-206ENST00000472311 325 ntTSL 2 BASIC1.68□□□□□ -2.14
BRF1Q92994 SNORA31.2-201ENST00000516019 134 ntBASIC1.68□□□□□ -2.14
BRF1Q92994 AC138749.4-201ENST00000563970 127 ntBASIC1.68□□□□□ -2.14
BRF1Q92994 U7.3-201ENST00000616123 62 ntBASIC1.68□□□□□ -2.14
BRF1Q92994 KIAA1107-201ENST00000370378 4622 ntTSL 5 BASIC1.68□□□□□ -2.14
BRF1Q92994 Y_RNA.173-201ENST00000363776 113 ntBASIC1.67□□□□□ -2.14
BRF1Q92994 RNU6ATAC3P-201ENST00000387974 126 ntBASIC1.67□□□□□ -2.14
BRF1Q92994 snoU13.23-201ENST00000458863 104 ntBASIC1.67□□□□□ -2.14
BRF1Q92994 AC012676.2-201ENST00000619258 186 ntBASIC1.67□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 189.3 ms