Protein–RNA interactions for Protein: Q8TBC3

SHKBP1, SH3KBP1-binding protein 1, humanhuman

Predictions only

Length 707 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1Q8TBC3 TRAJ1-201ENST00000390536 62 ntAPPRIS P1 BASIC2.2□□□□□ -2.06
SHKBP1Q8TBC3 SNORA48.3-201ENST00000391081 134 ntBASIC2.2□□□□□ -2.06
SHKBP1Q8TBC3 RNU6ATAC42P-201ENST00000408637 95 ntBASIC2.2□□□□□ -2.06
SHKBP1Q8TBC3 RNU6-380P-201ENST00000410207 107 ntBASIC2.2□□□□□ -2.06
SHKBP1Q8TBC3 RNA5SP100-201ENST00000410903 110 ntBASIC2.2□□□□□ -2.06
SHKBP1Q8TBC3 RNA5SP59-201ENST00000410922 110 ntBASIC2.2□□□□□ -2.06
SHKBP1Q8TBC3 snoU13.2-201ENST00000459201 104 ntBASIC2.2□□□□□ -2.06
SHKBP1Q8TBC3 FGF7P7-201ENST00000514120 227 ntBASIC2.2□□□□□ -2.06
SHKBP1Q8TBC3 5S_rRNA.3-201ENST00000517021 110 ntBASIC2.2□□□□□ -2.06
SHKBP1Q8TBC3 MIR5002-201ENST00000584713 97 ntBASIC2.2□□□□□ -2.06
SHKBP1Q8TBC3 5S_rRNA.19-201ENST00000612131 110 ntBASIC2.2□□□□□ -2.06
SHKBP1Q8TBC3 MIR6895-201ENST00000613497 78 ntBASIC2.2□□□□□ -2.06
SHKBP1Q8TBC3 5S_rRNA.18-201ENST00000621941 110 ntBASIC2.2□□□□□ -2.06
SHKBP1Q8TBC3 RNA5SP99-201ENST00000364020 114 ntBASIC2.19□□□□□ -2.06
SHKBP1Q8TBC3 Y_RNA.532-201ENST00000384590 113 ntBASIC2.19□□□□□ -2.06
SHKBP1Q8TBC3 MIR653-201ENST00000385279 96 ntBASIC2.19□□□□□ -2.06
SHKBP1Q8TBC3 RNA5SP292-201ENST00000390974 118 ntBASIC2.19□□□□□ -2.06
SHKBP1Q8TBC3 5S_rRNA.2-201ENST00000391293 112 ntBASIC2.19□□□□□ -2.06
SHKBP1Q8TBC3 RNU6-717P-201ENST00000459076 104 ntBASIC2.19□□□□□ -2.06
SHKBP1Q8TBC3 Y_RNA.660-201ENST00000516002 120 ntBASIC2.19□□□□□ -2.06
SHKBP1Q8TBC3 ZDBF2-202ENST00000611847 9890 ntTSL 5 BASIC2.19□□□□□ -2.06
SHKBP1Q8TBC3 KPNA5-202ENST00000368564 11311 ntAPPRIS P1 TSL 1 (best) BASIC2.18□□□□□ -2.06
SHKBP1Q8TBC3 FAR1-204ENST00000532502 5820 ntTSL 2 BASIC2.18□□□□□ -2.06
SHKBP1Q8TBC3 SNORA67.1-201ENST00000364749 141 ntBASIC2.18□□□□□ -2.06
SHKBP1Q8TBC3 RNU6-811P-201ENST00000384069 107 ntBASIC2.18□□□□□ -2.06
SHKBP1Q8TBC3 MIR563-201ENST00000385080 79 ntBASIC2.18□□□□□ -2.06
SHKBP1Q8TBC3 U8.13-201ENST00000390842 128 ntBASIC2.18□□□□□ -2.06
SHKBP1Q8TBC3 BX276092.1-201ENST00000427368 251 ntBASIC2.18□□□□□ -2.06
SHKBP1Q8TBC3 HMGN2P23-201ENST00000456759 269 ntBASIC2.18□□□□□ -2.06
SHKBP1Q8TBC3 RNU6-1108P-201ENST00000516308 104 ntBASIC2.18□□□□□ -2.06
SHKBP1Q8TBC3 RNU6-1015P-201ENST00000517121 99 ntBASIC2.18□□□□□ -2.06
SHKBP1Q8TBC3 U6.109-201ENST00000636749 87 ntBASIC2.18□□□□□ -2.06
SHKBP1Q8TBC3 OMD-201ENST00000375550 2449 ntAPPRIS P1 TSL 1 (best) BASIC2.17□□□□□ -2.06
SHKBP1Q8TBC3 RNA5SP160-201ENST00000364866 120 ntBASIC2.17□□□□□ -2.06
SHKBP1Q8TBC3 RNU6-203P-201ENST00000384038 104 ntBASIC2.17□□□□□ -2.06
SHKBP1Q8TBC3 SNORA72.6-201ENST00000384520 129 ntBASIC2.17□□□□□ -2.06
SHKBP1Q8TBC3 RNU6-360P-201ENST00000390944 104 ntBASIC2.17□□□□□ -2.06
SHKBP1Q8TBC3 RNU6-482P-201ENST00000391068 107 ntBASIC2.17□□□□□ -2.06
SHKBP1Q8TBC3 RPL23AP42-201ENST00000471152 471 ntBASIC2.17□□□□□ -2.06
SHKBP1Q8TBC3 RNU4ATAC9P-201ENST00000517146 126 ntBASIC2.17□□□□□ -2.06
SHKBP1Q8TBC3 AC121758.2-201ENST00000553271 193 ntBASIC2.17□□□□□ -2.06
SHKBP1Q8TBC3 PRELID3BP2-201ENST00000605362 201 ntBASIC2.17□□□□□ -2.06
SHKBP1Q8TBC3 MIER3-202ENST00000381199 5188 ntAPPRIS ALT1 TSL 1 (best) BASIC2.16□□□□□ -2.06
SHKBP1Q8TBC3 KIAA1551-201ENST00000312561 6230 ntAPPRIS P1 TSL 1 (best) BASIC2.16□□□□□ -2.06
SHKBP1Q8TBC3 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC2.16□□□□□ -2.06
SHKBP1Q8TBC3 PCDH11Y-203ENST00000362095 4220 ntAPPRIS ALT2 TSL 1 (best) BASIC2.16□□□□□ -2.06
SHKBP1Q8TBC3 SNORD36A-201ENST00000362874 73 ntBASIC2.16□□□□□ -2.06
SHKBP1Q8TBC3 Y_RNA.119-201ENST00000363301 96 ntBASIC2.16□□□□□ -2.06
SHKBP1Q8TBC3 SNORA25.9-201ENST00000365087 128 ntBASIC2.16□□□□□ -2.06
SHKBP1Q8TBC3 MIR194-1-201ENST00000384892 85 ntBASIC2.16□□□□□ -2.06
SHKBP1Q8TBC3 MIR520H-201ENST00000385126 88 ntBASIC2.16□□□□□ -2.06
SHKBP1Q8TBC3 RNU6-75P-201ENST00000515944 104 ntBASIC2.16□□□□□ -2.06
SHKBP1Q8TBC3 RNU6-871P-201ENST00000516122 100 ntBASIC2.16□□□□□ -2.06
SHKBP1Q8TBC3 SNORA18.5-201ENST00000516616 101 ntBASIC2.16□□□□□ -2.06
SHKBP1Q8TBC3 RNU6-295P-201ENST00000516901 104 ntBASIC2.16□□□□□ -2.06
SHKBP1Q8TBC3 SNORA31.17-201ENST00000516953 127 ntBASIC2.16□□□□□ -2.06
SHKBP1Q8TBC3 Y_RNA.783-201ENST00000613546 102 ntBASIC2.16□□□□□ -2.06
SHKBP1Q8TBC3 U1.36-201ENST00000620684 176 ntBASIC2.16□□□□□ -2.06
SHKBP1Q8TBC3 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC2.16□□□□□ -2.06
SHKBP1Q8TBC3 AC008163.1-202ENST00000636004 2889 ntBASIC2.15□□□□□ -2.07
SHKBP1Q8TBC3 MIR588-201ENST00000384900 83 ntBASIC2.15□□□□□ -2.07
SHKBP1Q8TBC3 AC023790.1-201ENST00000482174 347 ntBASIC2.15□□□□□ -2.07
SHKBP1Q8TBC3 RNU6-322P-201ENST00000516010 103 ntBASIC2.15□□□□□ -2.07
SHKBP1Q8TBC3 RNU6-448P-201ENST00000517052 107 ntBASIC2.15□□□□□ -2.07
SHKBP1Q8TBC3 MIR4536-1-201ENST00000583537 88 ntBASIC2.15□□□□□ -2.07
SHKBP1Q8TBC3 CERS6-AS1-202ENST00000594898 499 ntTSL 5 BASIC2.15□□□□□ -2.07
SHKBP1Q8TBC3 ZNF355P-201ENST00000427301 3216 ntBASIC2.14□□□□□ -2.07
SHKBP1Q8TBC3 RNA5SP48-201ENST00000363969 126 ntBASIC2.14□□□□□ -2.07
SHKBP1Q8TBC3 RNU6-132P-201ENST00000383863 107 ntBASIC2.14□□□□□ -2.07
SHKBP1Q8TBC3 MIR635-201ENST00000384830 98 ntBASIC2.14□□□□□ -2.07
SHKBP1Q8TBC3 HSPE1P24-201ENST00000450782 238 ntBASIC2.14□□□□□ -2.07
SHKBP1Q8TBC3 MIR3064-201ENST00000581130 66 ntBASIC2.14□□□□□ -2.07
SHKBP1Q8TBC3 MIR4658-201ENST00000584344 65 ntBASIC2.14□□□□□ -2.07
SHKBP1Q8TBC3 AC104996.3-201ENST00000590718 94 ntBASIC2.14□□□□□ -2.07
SHKBP1Q8TBC3 AP000942.3-201ENST00000603702 160 ntBASIC2.14□□□□□ -2.07
SHKBP1Q8TBC3 MIR6740-201ENST00000618268 113 ntBASIC2.14□□□□□ -2.07
SHKBP1Q8TBC3 HAS2-201ENST00000303924 4190 ntAPPRIS P1 TSL 1 (best) BASIC2.14□□□□□ -2.07
SHKBP1Q8TBC3 MIRLET7G-201ENST00000362280 84 ntBASIC2.13□□□□□ -2.07
SHKBP1Q8TBC3 MIR30D-201ENST00000362283 70 ntBASIC2.13□□□□□ -2.07
SHKBP1Q8TBC3 MIR516A2-201ENST00000384888 90 ntBASIC2.13□□□□□ -2.07
SHKBP1Q8TBC3 MIR516A1-201ENST00000385033 90 ntBASIC2.13□□□□□ -2.07
SHKBP1Q8TBC3 RNU6-1254P-201ENST00000391266 104 ntBASIC2.13□□□□□ -2.07
SHKBP1Q8TBC3 RNU6ATAC38P-201ENST00000408119 126 ntBASIC2.13□□□□□ -2.07
SHKBP1Q8TBC3 MIR1302-7-201ENST00000408841 72 ntBASIC2.13□□□□□ -2.07
SHKBP1Q8TBC3 AC004965.1-201ENST00000413033 213 ntBASIC2.13□□□□□ -2.07
SHKBP1Q8TBC3 AL603825.1-201ENST00000438481 80 ntBASIC2.13□□□□□ -2.07
SHKBP1Q8TBC3 SNORD111.1-201ENST00000516421 86 ntBASIC2.13□□□□□ -2.07
SHKBP1Q8TBC3 RNU6-548P-201ENST00000517083 115 ntBASIC2.13□□□□□ -2.07
SHKBP1Q8TBC3 MIR4484-201ENST00000582855 83 ntBASIC2.13□□□□□ -2.07
SHKBP1Q8TBC3 SNORA4-201ENST00000584302 138 ntBASIC2.13□□□□□ -2.07
SHKBP1Q8TBC3 MIR4448-201ENST00000584360 86 ntBASIC2.13□□□□□ -2.07
SHKBP1Q8TBC3 MIR6845-201ENST00000613182 61 ntBASIC2.13□□□□□ -2.07
SHKBP1Q8TBC3 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC2.13□□□□□ -2.07
SHKBP1Q8TBC3 Y_RNA.283-201ENST00000364798 112 ntBASIC2.12□□□□□ -2.07
SHKBP1Q8TBC3 SNORD77.2-201ENST00000391045 68 ntBASIC2.12□□□□□ -2.07
SHKBP1Q8TBC3 RNU6-687P-201ENST00000516443 89 ntBASIC2.12□□□□□ -2.07
SHKBP1Q8TBC3 RNU6-807P-201ENST00000516805 107 ntBASIC2.12□□□□□ -2.07
SHKBP1Q8TBC3 MIR3192-201ENST00000584920 77 ntBASIC2.12□□□□□ -2.07
SHKBP1Q8TBC3 AL357312.1-201ENST00000603879 298 ntBASIC2.12□□□□□ -2.07
SHKBP1Q8TBC3 AL353997.5-201ENST00000618886 171 ntBASIC2.12□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 258.1 ms