Protein–RNA interactions for Protein: Q7Z6J0

SH3RF1, E3 ubiquitin-protein ligase SH3RF1, humanhuman

Predictions only

Length 888 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF1Q7Z6J0 RNU7-41P-201ENST00000515917 61 ntBASIC2.72□□□□□ -1.97
SH3RF1Q7Z6J0 SNORA18.5-201ENST00000516616 101 ntBASIC2.72□□□□□ -1.97
SH3RF1Q7Z6J0 SNORA31.15-201ENST00000516771 132 ntBASIC2.72□□□□□ -1.97
SH3RF1Q7Z6J0 AL137847.3-201ENST00000611521 109 ntBASIC2.72□□□□□ -1.97
SH3RF1Q7Z6J0 PRKD3-201ENST00000234179 5900 ntAPPRIS P1 TSL 1 (best) BASIC2.72□□□□□ -1.97
SH3RF1Q7Z6J0 AC009474.2-201ENST00000451383 136 ntBASIC2.71□□□□□ -1.98
SH3RF1Q7Z6J0 RNU6-303P-201ENST00000517091 106 ntBASIC2.71□□□□□ -1.98
SH3RF1Q7Z6J0 MIR4500-201ENST00000579472 76 ntBASIC2.71□□□□□ -1.98
SH3RF1Q7Z6J0 AC090897.1-201ENST00000580909 226 ntBASIC2.71□□□□□ -1.98
SH3RF1Q7Z6J0 AGL-204ENST00000370161 6923 ntTSL 5 BASIC2.71□□□□□ -1.98
SH3RF1Q7Z6J0 WDR3-201ENST00000349139 9974 ntAPPRIS P1 TSL 1 (best) BASIC2.7□□□□□ -1.98
SH3RF1Q7Z6J0 MAP3K2-203ENST00000409947 10992 ntAPPRIS P1 TSL 1 (best) BASIC2.7□□□□□ -1.98
SH3RF1Q7Z6J0 Y_RNA.596-201ENST00000410462 109 ntBASIC2.7□□□□□ -1.98
SH3RF1Q7Z6J0 RNA5SP458-201ENST00000516188 119 ntBASIC2.7□□□□□ -1.98
SH3RF1Q7Z6J0 SNORD111.1-201ENST00000516421 86 ntBASIC2.7□□□□□ -1.98
SH3RF1Q7Z6J0 RNU6-850P-201ENST00000516934 103 ntBASIC2.7□□□□□ -1.98
SH3RF1Q7Z6J0 TRAJ36-201ENST00000614481 58 ntAPPRIS P1 BASIC2.7□□□□□ -1.98
SH3RF1Q7Z6J0 SLC4A7-201ENST00000295736 7757 ntAPPRIS P3 TSL 1 (best) BASIC2.69□□□□□ -1.98
SH3RF1Q7Z6J0 WWP1P1-201ENST00000466609 2769 ntBASIC2.69□□□□□ -1.98
SH3RF1Q7Z6J0 ASPM-202ENST00000367408 3747 ntTSL 1 (best) BASIC2.69□□□□□ -1.98
SH3RF1Q7Z6J0 MIR524-201ENST00000385242 87 ntBASIC2.69□□□□□ -1.98
SH3RF1Q7Z6J0 MIR653-201ENST00000385279 96 ntBASIC2.69□□□□□ -1.98
SH3RF1Q7Z6J0 AC004965.1-201ENST00000413033 213 ntBASIC2.69□□□□□ -1.98
SH3RF1Q7Z6J0 RNA5SP402-201ENST00000517148 110 ntBASIC2.69□□□□□ -1.98
SH3RF1Q7Z6J0 MIR4529-201ENST00000578110 78 ntBASIC2.69□□□□□ -1.98
SH3RF1Q7Z6J0 FSIP2-206ENST00000611759 3882 ntAPPRIS ALT2 TSL 5 BASIC2.68□□□□□ -1.98
SH3RF1Q7Z6J0 Y_RNA.164-201ENST00000363709 102 ntBASIC2.68□□□□□ -1.98
SH3RF1Q7Z6J0 RNA5SP259-201ENST00000365541 109 ntBASIC2.68□□□□□ -1.98
SH3RF1Q7Z6J0 RNU6-203P-201ENST00000384038 104 ntBASIC2.68□□□□□ -1.98
SH3RF1Q7Z6J0 snoU13.2-201ENST00000459201 104 ntBASIC2.68□□□□□ -1.98
SH3RF1Q7Z6J0 MIR4536-1-201ENST00000583537 88 ntBASIC2.68□□□□□ -1.98
SH3RF1Q7Z6J0 MIR1291-201ENST00000627649 87 ntBASIC2.68□□□□□ -1.98
SH3RF1Q7Z6J0 DYNC2H1-202ENST00000375735 13678 ntAPPRIS ALT1 TSL 1 (best) BASIC2.68□□□□□ -1.98
SH3RF1Q7Z6J0 RNU6-132P-201ENST00000383863 107 ntBASIC2.67□□□□□ -1.98
SH3RF1Q7Z6J0 RNU6-571P-201ENST00000384128 107 ntBASIC2.67□□□□□ -1.98
SH3RF1Q7Z6J0 SNORA72.6-201ENST00000384520 129 ntBASIC2.67□□□□□ -1.98
SH3RF1Q7Z6J0 RNA5SP450-201ENST00000411206 102 ntBASIC2.67□□□□□ -1.98
SH3RF1Q7Z6J0 HMGN2P35-201ENST00000412164 270 ntBASIC2.67□□□□□ -1.98
SH3RF1Q7Z6J0 AC023790.1-201ENST00000482174 347 ntBASIC2.67□□□□□ -1.98
SH3RF1Q7Z6J0 AC026436.1-201ENST00000510537 270 ntBASIC2.67□□□□□ -1.98
SH3RF1Q7Z6J0 RNU6-75P-201ENST00000515944 104 ntBASIC2.67□□□□□ -1.98
SH3RF1Q7Z6J0 RNU4ATAC9P-201ENST00000517146 126 ntBASIC2.67□□□□□ -1.98
SH3RF1Q7Z6J0 MIR3064-201ENST00000581130 66 ntBASIC2.67□□□□□ -1.98
SH3RF1Q7Z6J0 AC104996.3-201ENST00000590718 94 ntBASIC2.67□□□□□ -1.98
SH3RF1Q7Z6J0 LRRCC1-202ENST00000414626 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC2.66□□□□□ -1.98
SH3RF1Q7Z6J0 LCORL-202ENST00000382224 4984 ntAPPRIS ALT2 TSL 5 BASIC2.66□□□□□ -1.98
SH3RF1Q7Z6J0 RNU6-208P-201ENST00000362431 107 ntBASIC2.66□□□□□ -1.98
SH3RF1Q7Z6J0 RNU6-1241P-201ENST00000384536 107 ntBASIC2.66□□□□□ -1.98
SH3RF1Q7Z6J0 RNU6ATAC42P-201ENST00000408637 95 ntBASIC2.66□□□□□ -1.98
SH3RF1Q7Z6J0 HSPE1P24-201ENST00000450782 238 ntBASIC2.66□□□□□ -1.98
SH3RF1Q7Z6J0 AC138749.4-201ENST00000563970 127 ntBASIC2.66□□□□□ -1.98
SH3RF1Q7Z6J0 MIR5194-201ENST00000582634 120 ntBASIC2.66□□□□□ -1.98
SH3RF1Q7Z6J0 AL096861.1-201ENST00000610899 123 ntBASIC2.66□□□□□ -1.98
SH3RF1Q7Z6J0 NEAT1_2.1-201ENST00000620525 105 ntBASIC2.66□□□□□ -1.98
SH3RF1Q7Z6J0 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC2.66□□□□□ -1.98
SH3RF1Q7Z6J0 U6.109-201ENST00000636749 87 ntBASIC2.66□□□□□ -1.98
SH3RF1Q7Z6J0 AC003984.1-201ENST00000450977 4104 ntTSL 1 (best) BASIC2.65□□□□□ -1.98
SH3RF1Q7Z6J0 SCN1A-219ENST00000641575 12874 ntAPPRIS ALT1 BASIC2.65□□□□□ -1.99
SH3RF1Q7Z6J0 SNORD115-31-201ENST00000365318 82 ntBASIC2.65□□□□□ -1.99
SH3RF1Q7Z6J0 MIR588-201ENST00000384900 83 ntBASIC2.65□□□□□ -1.99
SH3RF1Q7Z6J0 MIR513A1-201ENST00000385138 129 ntBASIC2.65□□□□□ -1.99
SH3RF1Q7Z6J0 RNU6-663P-201ENST00000391105 106 ntBASIC2.65□□□□□ -1.99
SH3RF1Q7Z6J0 RNA5SP445-201ENST00000515889 115 ntBASIC2.65□□□□□ -1.99
SH3RF1Q7Z6J0 RNU6ATAC9P-201ENST00000516210 116 ntBASIC2.65□□□□□ -1.99
SH3RF1Q7Z6J0 SNORA4-201ENST00000584302 138 ntBASIC2.65□□□□□ -1.99
SH3RF1Q7Z6J0 AL357312.1-201ENST00000603879 298 ntBASIC2.65□□□□□ -1.99
SH3RF1Q7Z6J0 SNORD36A-201ENST00000362874 73 ntBASIC2.64□□□□□ -1.99
SH3RF1Q7Z6J0 RNU6-396P-201ENST00000365369 105 ntBASIC2.64□□□□□ -1.99
SH3RF1Q7Z6J0 RNU7-156P-201ENST00000517214 74 ntBASIC2.64□□□□□ -1.99
SH3RF1Q7Z6J0 AC099850.3-201ENST00000577678 321 ntTSL 3 BASIC2.64□□□□□ -1.99
SH3RF1Q7Z6J0 TTK-202ENST00000369798 3010 ntAPPRIS P3 TSL 1 (best) BASIC2.63□□□□□ -1.99
SH3RF1Q7Z6J0 CACNB4-238ENST00000636901 7706 ntTSL 5 BASIC2.63□□□□□ -1.99
SH3RF1Q7Z6J0 SNORA3A-201ENST00000364113 130 ntBASIC2.63□□□□□ -1.99
SH3RF1Q7Z6J0 Y_RNA.491-201ENST00000384417 107 ntBASIC2.63□□□□□ -1.99
SH3RF1Q7Z6J0 AC244023.1-201ENST00000426884 112 ntBASIC2.63□□□□□ -1.99
SH3RF1Q7Z6J0 AC015818.7-201ENST00000428754 109 ntBASIC2.63□□□□□ -1.99
SH3RF1Q7Z6J0 AC242498.1-201ENST00000604134 111 ntBASIC2.63□□□□□ -1.99
SH3RF1Q7Z6J0 AC245884.12-201ENST00000615364 59 ntBASIC2.63□□□□□ -1.99
SH3RF1Q7Z6J0 MIR6873-201ENST00000622788 63 ntBASIC2.63□□□□□ -1.99
SH3RF1Q7Z6J0 SNORA67.1-201ENST00000364749 141 ntBASIC2.62□□□□□ -1.99
SH3RF1Q7Z6J0 Y_RNA.283-201ENST00000364798 112 ntBASIC2.62□□□□□ -1.99
SH3RF1Q7Z6J0 Y_RNA.338-201ENST00000365320 114 ntBASIC2.62□□□□□ -1.99
SH3RF1Q7Z6J0 RNU6-499P-201ENST00000365615 107 ntBASIC2.62□□□□□ -1.99
SH3RF1Q7Z6J0 SNORA64-201ENST00000384674 134 ntBASIC2.62□□□□□ -1.99
SH3RF1Q7Z6J0 MIR194-1-201ENST00000384892 85 ntBASIC2.62□□□□□ -1.99
SH3RF1Q7Z6J0 TRAJ1-201ENST00000390536 62 ntAPPRIS P1 BASIC2.62□□□□□ -1.99
SH3RF1Q7Z6J0 YWHAEP2-201ENST00000580066 112 ntBASIC2.62□□□□□ -1.99
SH3RF1Q7Z6J0 YWHAEP3-201ENST00000582767 121 ntBASIC2.62□□□□□ -1.99
SH3RF1Q7Z6J0 AC005520.4-201ENST00000604337 90 ntBASIC2.62□□□□□ -1.99
SH3RF1Q7Z6J0 EYS-211ENST00000503581 10589 ntAPPRIS P3 TSL 5 BASIC2.61□□□□□ -1.99
SH3RF1Q7Z6J0 Y_RNA.12-201ENST00000362393 112 ntBASIC2.61□□□□□ -1.99
SH3RF1Q7Z6J0 Y_RNA.119-201ENST00000363301 96 ntBASIC2.61□□□□□ -1.99
SH3RF1Q7Z6J0 MIR154-201ENST00000385243 84 ntBASIC2.61□□□□□ -1.99
SH3RF1Q7Z6J0 MIR548U-201ENST00000390728 81 ntBASIC2.61□□□□□ -1.99
SH3RF1Q7Z6J0 BX276092.1-201ENST00000427368 251 ntBASIC2.61□□□□□ -1.99
SH3RF1Q7Z6J0 AC093423.1-201ENST00000440817 142 ntBASIC2.61□□□□□ -1.99
SH3RF1Q7Z6J0 SNORA31.25-201ENST00000517242 134 ntBASIC2.61□□□□□ -1.99
SH3RF1Q7Z6J0 MIR5007-201ENST00000583098 95 ntBASIC2.61□□□□□ -1.99
SH3RF1Q7Z6J0 PRELID3BP2-201ENST00000605362 201 ntBASIC2.61□□□□□ -1.99
SH3RF1Q7Z6J0 MIR7111-201ENST00000619751 72 ntBASIC2.61□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 194.2 ms