Protein–RNA interactions for Protein: Q6PJG9

LRFN4, Leucine-rich repeat and fibronectin type-III domain-containing protein 4, humanhuman

Predictions only

Length 635 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN4Q6PJG9 RNU6-675P-201ENST00000384236 104 ntBASIC1.88□□□□□ -2.11
LRFN4Q6PJG9 RNU6-480P-201ENST00000384332 107 ntBASIC1.88□□□□□ -2.11
LRFN4Q6PJG9 RNU6ATAC3P-201ENST00000387974 126 ntBASIC1.88□□□□□ -2.11
LRFN4Q6PJG9 SNORA3.2-201ENST00000408221 125 ntBASIC1.88□□□□□ -2.11
LRFN4Q6PJG9 AL512310.8-201ENST00000550183 120 ntBASIC1.88□□□□□ -2.11
LRFN4Q6PJG9 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC1.88□□□□□ -2.11
LRFN4Q6PJG9 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC1.87□□□□□ -2.11
LRFN4Q6PJG9 ATP13A3-201ENST00000256031 7322 ntAPPRIS P1 TSL 5 BASIC1.87□□□□□ -2.11
LRFN4Q6PJG9 RNU6-654P-201ENST00000364373 107 ntBASIC1.87□□□□□ -2.11
LRFN4Q6PJG9 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC1.87□□□□□ -2.11
LRFN4Q6PJG9 AC245517.4-201ENST00000448601 281 ntBASIC1.87□□□□□ -2.11
LRFN4Q6PJG9 RNU1-98P-201ENST00000458992 160 ntBASIC1.87□□□□□ -2.11
LRFN4Q6PJG9 RNU1-41P-201ENST00000516161 162 ntBASIC1.87□□□□□ -2.11
LRFN4Q6PJG9 RNU1-48P-201ENST00000516400 162 ntBASIC1.87□□□□□ -2.11
LRFN4Q6PJG9 RNU6-165P-201ENST00000517170 99 ntBASIC1.87□□□□□ -2.11
LRFN4Q6PJG9 AC090897.1-201ENST00000580909 226 ntBASIC1.87□□□□□ -2.11
LRFN4Q6PJG9 AC012493.3-201ENST00000604494 112 ntBASIC1.87□□□□□ -2.11
LRFN4Q6PJG9 U6.109-201ENST00000636749 87 ntBASIC1.87□□□□□ -2.11
LRFN4Q6PJG9 HFM1-201ENST00000370425 4931 ntAPPRIS P1 TSL 1 (best) BASIC1.87□□□□□ -2.11
LRFN4Q6PJG9 KIAA1551-201ENST00000312561 6230 ntAPPRIS P1 TSL 1 (best) BASIC1.87□□□□□ -2.11
LRFN4Q6PJG9 TRAJ1-201ENST00000390536 62 ntAPPRIS P1 BASIC1.86□□□□□ -2.11
LRFN4Q6PJG9 RNU6-1275P-201ENST00000391087 107 ntBASIC1.86□□□□□ -2.11
LRFN4Q6PJG9 RNU1-78P-201ENST00000391248 165 ntBASIC1.86□□□□□ -2.11
LRFN4Q6PJG9 RNU6-592P-201ENST00000411333 103 ntBASIC1.86□□□□□ -2.11
LRFN4Q6PJG9 MIR18B-201ENST00000454574 71 ntBASIC1.86□□□□□ -2.11
LRFN4Q6PJG9 AC025033.1-201ENST00000463883 194 ntBASIC1.86□□□□□ -2.11
LRFN4Q6PJG9 AC008834.1-201ENST00000511612 175 ntBASIC1.86□□□□□ -2.11
LRFN4Q6PJG9 AC007991.3-201ENST00000517623 502 ntTSL 4 BASIC1.86□□□□□ -2.11
LRFN4Q6PJG9 MIR4422-201ENST00000581938 83 ntBASIC1.86□□□□□ -2.11
LRFN4Q6PJG9 MIR6873-201ENST00000622788 63 ntBASIC1.86□□□□□ -2.11
LRFN4Q6PJG9 SNORA2B-201ENST00000384583 137 ntBASIC1.85□□□□□ -2.11
LRFN4Q6PJG9 SNORA64-201ENST00000384674 134 ntBASIC1.85□□□□□ -2.11
LRFN4Q6PJG9 MIR676-201ENST00000390702 67 ntBASIC1.85□□□□□ -2.11
LRFN4Q6PJG9 RNU6-402P-201ENST00000410678 103 ntBASIC1.85□□□□□ -2.11
LRFN4Q6PJG9 MIR1273D-201ENST00000577266 86 ntBASIC1.85□□□□□ -2.11
LRFN4Q6PJG9 MIR4668-201ENST00000582284 70 ntBASIC1.85□□□□□ -2.11
LRFN4Q6PJG9 SCN7A-206ENST00000619410 7186 ntAPPRIS P1 TSL 5 BASIC1.85□□□□□ -2.11
LRFN4Q6PJG9 SCN7A-207ENST00000621965 7186 ntAPPRIS P1 TSL 5 BASIC1.85□□□□□ -2.11
LRFN4Q6PJG9 AC008163.1-202ENST00000636004 2889 ntBASIC1.84□□□□□ -2.11
LRFN4Q6PJG9 U8.2-201ENST00000363156 134 ntBASIC1.84□□□□□ -2.11
LRFN4Q6PJG9 RNA5SP133-201ENST00000363368 119 ntBASIC1.84□□□□□ -2.11
LRFN4Q6PJG9 RNU6-573P-201ENST00000383938 106 ntBASIC1.84□□□□□ -2.11
LRFN4Q6PJG9 RN7SKP223-201ENST00000410582 62 ntBASIC1.84□□□□□ -2.11
LRFN4Q6PJG9 RNU6-1054P-201ENST00000411293 104 ntBASIC1.84□□□□□ -2.11
LRFN4Q6PJG9 SNRPGP12-201ENST00000449481 213 ntBASIC1.84□□□□□ -2.11
LRFN4Q6PJG9 ZNRD1-AS1_3.8-201ENST00000611686 104 ntBASIC1.84□□□□□ -2.11
LRFN4Q6PJG9 uc_338.6-201ENST00000613544 171 ntBASIC1.84□□□□□ -2.11
LRFN4Q6PJG9 AL161722.3-201ENST00000605789 2983 ntBASIC1.83□□□□□ -2.12
LRFN4Q6PJG9 Y_RNA.119-201ENST00000363301 96 ntBASIC1.83□□□□□ -2.12
LRFN4Q6PJG9 RNU6-219P-201ENST00000364728 107 ntBASIC1.83□□□□□ -2.12
LRFN4Q6PJG9 RNA5SP160-201ENST00000364866 120 ntBASIC1.83□□□□□ -2.12
LRFN4Q6PJG9 MIR181B2-201ENST00000385004 89 ntBASIC1.83□□□□□ -2.12
LRFN4Q6PJG9 RNA5SP95-201ENST00000410319 137 ntBASIC1.83□□□□□ -2.12
LRFN4Q6PJG9 MIR4500-201ENST00000579472 76 ntBASIC1.83□□□□□ -2.12
LRFN4Q6PJG9 MIR219B-201ENST00000637023 88 ntBASIC1.83□□□□□ -2.12
LRFN4Q6PJG9 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC1.82□□□□□ -2.12
LRFN4Q6PJG9 RNU6-571P-201ENST00000384128 107 ntBASIC1.82□□□□□ -2.12
LRFN4Q6PJG9 RNU6ATAC37P-201ENST00000408328 131 ntBASIC1.82□□□□□ -2.12
LRFN4Q6PJG9 RNA5SP489-201ENST00000410986 109 ntBASIC1.82□□□□□ -2.12
LRFN4Q6PJG9 Y_RNA.620-201ENST00000411009 88 ntBASIC1.82□□□□□ -2.12
LRFN4Q6PJG9 RPS27P16-201ENST00000425758 201 ntBASIC1.82□□□□□ -2.12
LRFN4Q6PJG9 AC022137.1-201ENST00000483735 151 ntBASIC1.82□□□□□ -2.12
LRFN4Q6PJG9 RN7SKP88-201ENST00000516847 250 ntBASIC1.82□□□□□ -2.12
LRFN4Q6PJG9 AP003327.1-201ENST00000529684 127 ntBASIC1.82□□□□□ -2.12
LRFN4Q6PJG9 AL513043.2-201ENST00000573941 143 ntBASIC1.82□□□□□ -2.12
LRFN4Q6PJG9 7SK.8-201ENST00000612110 250 ntBASIC1.82□□□□□ -2.12
LRFN4Q6PJG9 7SK.11-201ENST00000615477 250 ntBASIC1.82□□□□□ -2.12
LRFN4Q6PJG9 7SK.13-201ENST00000622040 250 ntBASIC1.82□□□□□ -2.12
LRFN4Q6PJG9 MIR1245B-201ENST00000636115 69 ntBASIC1.82□□□□□ -2.12
LRFN4Q6PJG9 Y_RNA.219-201ENST00000364232 113 ntBASIC1.81□□□□□ -2.12
LRFN4Q6PJG9 RNU6-53P-201ENST00000365367 106 ntBASIC1.81□□□□□ -2.12
LRFN4Q6PJG9 RNU6-242P-201ENST00000384359 107 ntBASIC1.81□□□□□ -2.12
LRFN4Q6PJG9 AC035139.1-201ENST00000423256 273 ntTSL 3 BASIC1.81□□□□□ -2.12
LRFN4Q6PJG9 GHRL-208ENST00000439975 326 ntTSL 1 (best) BASIC1.81□□□□□ -2.12
LRFN4Q6PJG9 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC1.8□□□□□ -2.12
LRFN4Q6PJG9 RNY1P4-201ENST00000384595 115 ntBASIC1.8□□□□□ -2.12
LRFN4Q6PJG9 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC1.8□□□□□ -2.12
LRFN4Q6PJG9 MIR934-201ENST00000401241 83 ntBASIC1.8□□□□□ -2.12
LRFN4Q6PJG9 SUMO2P12-201ENST00000405924 140 ntBASIC1.8□□□□□ -2.12
LRFN4Q6PJG9 Y_RNA.609-201ENST00000410669 89 ntBASIC1.8□□□□□ -2.12
LRFN4Q6PJG9 MIR4648-201ENST00000580107 72 ntBASIC1.8□□□□□ -2.12
LRFN4Q6PJG9 AC034238.1-213ENST00000611148 150 ntTSL 5 BASIC1.8□□□□□ -2.12
LRFN4Q6PJG9 Y_RNA.783-201ENST00000613546 102 ntBASIC1.8□□□□□ -2.12
LRFN4Q6PJG9 MIR8066-201ENST00000617280 78 ntBASIC1.8□□□□□ -2.12
LRFN4Q6PJG9 ZNF654-201ENST00000309495 4957 ntAPPRIS P2 TSL 1 (best) BASIC1.8□□□□□ -2.12
LRFN4Q6PJG9 Y_RNA.57-201ENST00000362806 113 ntBASIC1.79□□□□□ -2.12
LRFN4Q6PJG9 SNORD93-201ENST00000408813 74 ntBASIC1.79□□□□□ -2.12
LRFN4Q6PJG9 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC1.79□□□□□ -2.12
LRFN4Q6PJG9 AL161932.1-201ENST00000437408 146 ntBASIC1.79□□□□□ -2.12
LRFN4Q6PJG9 AC048334.1-201ENST00000477975 159 ntBASIC1.79□□□□□ -2.12
LRFN4Q6PJG9 RNU6-850P-201ENST00000516934 103 ntBASIC1.79□□□□□ -2.12
LRFN4Q6PJG9 MIR5089-201ENST00000580047 84 ntBASIC1.79□□□□□ -2.12
LRFN4Q6PJG9 AC025521.1-201ENST00000621624 286 ntBASIC1.79□□□□□ -2.12
LRFN4Q6PJG9 XIRP2-201ENST00000295237 5246 ntTSL 2 BASIC1.79□□□□□ -2.12
LRFN4Q6PJG9 Y_RNA.73-201ENST00000362910 113 ntBASIC1.78□□□□□ -2.12
LRFN4Q6PJG9 RNU4-58P-201ENST00000363192 141 ntBASIC1.78□□□□□ -2.12
LRFN4Q6PJG9 RNU1-36P-201ENST00000365130 165 ntBASIC1.78□□□□□ -2.12
LRFN4Q6PJG9 MIR1261-201ENST00000408659 82 ntBASIC1.78□□□□□ -2.12
LRFN4Q6PJG9 RNU6-267P-201ENST00000516714 103 ntBASIC1.78□□□□□ -2.12
LRFN4Q6PJG9 RNU6-902P-201ENST00000517212 91 ntBASIC1.78□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 178.2 ms