Protein–RNA interactions for Protein: Q02446

SP4, Transcription factor Sp4, humanhuman

Predictions only

Length 784 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SP4Q02446 TRAJ1-201ENST00000390536 62 ntAPPRIS P1 BASIC-0.36□□□□□ -2.47
SP4Q02446 AC244250.2-201ENST00000418731 148 ntBASIC-0.36□□□□□ -2.47
SP4Q02446 RNU7-79P-201ENST00000516082 62 ntBASIC-0.36□□□□□ -2.47
SP4Q02446 SCARNA24.2-201ENST00000516968 130 ntBASIC-0.36□□□□□ -2.47
SP4Q02446 IGHVIII-67-2-201ENST00000519849 88 ntBASIC-0.36□□□□□ -2.47
SP4Q02446 AC011825.2-201ENST00000583138 553 ntTSL 4 BASIC-0.36□□□□□ -2.47
SP4Q02446 SNORA70.25-201ENST00000612741 95 ntBASIC-0.36□□□□□ -2.47
SP4Q02446 AL442067.1-201ENST00000613261 223 ntBASIC-0.36□□□□□ -2.47
SP4Q02446 MIR4788-201ENST00000639104 80 ntBASIC-0.36□□□□□ -2.47
SP4Q02446 Y_RNA.26-201ENST00000362539 101 ntBASIC-0.37□□□□□ -2.47
SP4Q02446 Y_RNA.28-201ENST00000362554 111 ntBASIC-0.37□□□□□ -2.47
SP4Q02446 Y_RNA.84-201ENST00000363011 104 ntBASIC-0.37□□□□□ -2.47
SP4Q02446 Y_RNA.210-201ENST00000364161 110 ntBASIC-0.37□□□□□ -2.47
SP4Q02446 RNA5SP205-201ENST00000364653 136 ntBASIC-0.37□□□□□ -2.47
SP4Q02446 RNU4-70P-201ENST00000384579 139 ntBASIC-0.37□□□□□ -2.47
SP4Q02446 RNU4-63P-201ENST00000411313 118 ntBASIC-0.37□□□□□ -2.47
SP4Q02446 AC108059.2-201ENST00000434626 151 ntBASIC-0.37□□□□□ -2.47
SP4Q02446 AC244505.6-201ENST00000452829 130 ntBASIC-0.37□□□□□ -2.47
SP4Q02446 AP001328.1-201ENST00000528550 176 ntBASIC-0.37□□□□□ -2.47
SP4Q02446 Y_RNA.757-201ENST00000578934 114 ntBASIC-0.37□□□□□ -2.47
SP4Q02446 MIR3666-201ENST00000607845 111 ntBASIC-0.37□□□□□ -2.47
SP4Q02446 U6.109-201ENST00000636749 87 ntBASIC-0.37□□□□□ -2.47
SP4Q02446 Y_RNA.64-201ENST00000362845 102 ntBASIC-0.38□□□□□ -2.47
SP4Q02446 RNU4-84P-201ENST00000364200 139 ntBASIC-0.38□□□□□ -2.47
SP4Q02446 RNU6-702P-201ENST00000364982 107 ntBASIC-0.38□□□□□ -2.47
SP4Q02446 RNU6-728P-201ENST00000365375 104 ntBASIC-0.38□□□□□ -2.47
SP4Q02446 RNU6-811P-201ENST00000384069 107 ntBASIC-0.38□□□□□ -2.47
SP4Q02446 Y_RNA.431-201ENST00000384086 102 ntBASIC-0.38□□□□□ -2.47
SP4Q02446 MT-TD-201ENST00000387419 68 ntBASIC-0.38□□□□□ -2.47
SP4Q02446 SNORD2.1-201ENST00000458762 69 ntBASIC-0.38□□□□□ -2.47
SP4Q02446 RNU6-1258P-201ENST00000516911 111 ntBASIC-0.38□□□□□ -2.47
SP4Q02446 RNU7-35P-201ENST00000517174 62 ntBASIC-0.38□□□□□ -2.47
SP4Q02446 AC020913.3-201ENST00000594678 125 ntTSL 3 BASIC-0.38□□□□□ -2.47
SP4Q02446 MIR6507-201ENST00000613630 70 ntBASIC-0.38□□□□□ -2.47
SP4Q02446 CLRN1-AS1.1-201ENST00000615643 79 ntBASIC-0.38□□□□□ -2.47
SP4Q02446 Y_RNA.44-201ENST00000362676 108 ntBASIC-0.39□□□□□ -2.47
SP4Q02446 Y_RNA.56-201ENST00000362798 112 ntBASIC-0.39□□□□□ -2.47
SP4Q02446 Y_RNA.270-201ENST00000364693 104 ntBASIC-0.39□□□□□ -2.47
SP4Q02446 SNORD49B-201ENST00000365172 72 ntBASIC-0.39□□□□□ -2.47
SP4Q02446 MIR224-201ENST00000384889 81 ntBASIC-0.39□□□□□ -2.47
SP4Q02446 AC113618.1-201ENST00000416747 285 ntBASIC-0.39□□□□□ -2.47
SP4Q02446 RNU6-561P-201ENST00000516222 102 ntBASIC-0.39□□□□□ -2.47
SP4Q02446 RNU6-570P-201ENST00000517051 105 ntBASIC-0.39□□□□□ -2.47
SP4Q02446 RNU6-988P-201ENST00000519081 107 ntBASIC-0.39□□□□□ -2.47
SP4Q02446 SNORA22B-201ENST00000383876 138 ntBASIC-0.4□□□□□ -2.47
SP4Q02446 Y_RNA.416-201ENST00000384014 113 ntBASIC-0.4□□□□□ -2.47
SP4Q02446 RNU6-1162P-201ENST00000384443 104 ntBASIC-0.4□□□□□ -2.47
SP4Q02446 TRAJ57-201ENST00000390482 63 ntAPPRIS P1 BASIC-0.4□□□□□ -2.47
SP4Q02446 RNU6-381P-201ENST00000391259 108 ntBASIC-0.4□□□□□ -2.47
SP4Q02446 RNU4-43P-201ENST00000410628 137 ntBASIC-0.4□□□□□ -2.47
SP4Q02446 Y_RNA.610-201ENST00000410681 103 ntBASIC-0.4□□□□□ -2.47
SP4Q02446 MTND5P22-201ENST00000458380 195 ntBASIC-0.4□□□□□ -2.47
SP4Q02446 AC082651.2-201ENST00000496833 166 ntBASIC-0.4□□□□□ -2.47
SP4Q02446 SCARNA15-202ENST00000516881 127 ntBASIC-0.4□□□□□ -2.47
SP4Q02446 RNU7-161P-201ENST00000517289 62 ntBASIC-0.4□□□□□ -2.47
SP4Q02446 RNU2-60P-201ENST00000517290 128 ntBASIC-0.4□□□□□ -2.47
SP4Q02446 MIR378D2-201ENST00000580636 98 ntBASIC-0.4□□□□□ -2.47
SP4Q02446 TTC28-AS1_2.1-201ENST00000611117 157 ntBASIC-0.4□□□□□ -2.47
SP4Q02446 Y_RNA.82-201ENST00000363000 102 ntBASIC-0.41□□□□□ -2.48
SP4Q02446 Y_RNA.92-201ENST00000363043 102 ntBASIC-0.41□□□□□ -2.48
SP4Q02446 Y_RNA.171-201ENST00000363760 102 ntBASIC-0.41□□□□□ -2.48
SP4Q02446 Y_RNA.235-201ENST00000364412 102 ntBASIC-0.41□□□□□ -2.48
SP4Q02446 Y_RNA.306-201ENST00000365015 102 ntBASIC-0.41□□□□□ -2.48
SP4Q02446 Y_RNA.312-201ENST00000365089 102 ntBASIC-0.41□□□□□ -2.48
SP4Q02446 Y_RNA.322-201ENST00000365151 102 ntBASIC-0.41□□□□□ -2.48
SP4Q02446 Y_RNA.419-201ENST00000384041 102 ntBASIC-0.41□□□□□ -2.48
SP4Q02446 Y_RNA.455-201ENST00000384230 98 ntBASIC-0.41□□□□□ -2.48
SP4Q02446 AL500527.2-201ENST00000454105 95 ntBASIC-0.41□□□□□ -2.48
SP4Q02446 Y_RNA.650-201ENST00000459002 102 ntBASIC-0.41□□□□□ -2.48
SP4Q02446 RNU7-104P-201ENST00000459398 79 ntBASIC-0.41□□□□□ -2.48
SP4Q02446 Y_RNA.777-201ENST00000516982 102 ntBASIC-0.41□□□□□ -2.48
SP4Q02446 AC138749.4-201ENST00000563970 127 ntBASIC-0.41□□□□□ -2.48
SP4Q02446 MIR4677-201ENST00000584153 80 ntBASIC-0.41□□□□□ -2.48
SP4Q02446 Y_RNA.771-201ENST00000598668 102 ntBASIC-0.41□□□□□ -2.48
SP4Q02446 Y_RNA.789-201ENST00000622480 102 ntBASIC-0.41□□□□□ -2.48
SP4Q02446 AC073869.9-201ENST00000641610 120 ntBASIC-0.41□□□□□ -2.48
SP4Q02446 SYCP2-202ENST00000371001 5479 ntAPPRIS P2 TSL 1 (best) BASIC-0.42□□□□□ -2.48
SP4Q02446 SNORA25.7-201ENST00000364375 127 ntBASIC-0.42□□□□□ -2.48
SP4Q02446 TRAJ28-201ENST00000390509 66 ntAPPRIS P1 BASIC-0.42□□□□□ -2.48
SP4Q02446 SNORA75.1-201ENST00000391130 148 ntBASIC-0.42□□□□□ -2.48
SP4Q02446 Y_RNA.648-201ENST00000459455 110 ntBASIC-0.42□□□□□ -2.48
SP4Q02446 AC074198.2-201ENST00000508153 258 ntBASIC-0.42□□□□□ -2.48
SP4Q02446 RNU6-1265P-201ENST00000516342 103 ntBASIC-0.42□□□□□ -2.48
SP4Q02446 SNORD116-25-201ENST00000516517 92 ntBASIC-0.42□□□□□ -2.48
SP4Q02446 RNU6-1149P-201ENST00000516810 97 ntBASIC-0.42□□□□□ -2.48
SP4Q02446 SCARNA11.2-201ENST00000517183 154 ntBASIC-0.42□□□□□ -2.48
SP4Q02446 AC113195.1-201ENST00000579952 141 ntBASIC-0.42□□□□□ -2.48
SP4Q02446 MIR548S-201ENST00000581352 82 ntBASIC-0.42□□□□□ -2.48
SP4Q02446 AC098479.1-201ENST00000609225 154 ntBASIC-0.42□□□□□ -2.48
SP4Q02446 Y_RNA.804-201ENST00000615262 101 ntBASIC-0.42□□□□□ -2.48
SP4Q02446 MIR6514-201ENST00000622549 70 ntBASIC-0.42□□□□□ -2.48
SP4Q02446 MIR196A1-201ENST00000388006 70 ntBASIC-0.43□□□□□ -2.48
SP4Q02446 SNORA3B-201ENST00000391305 131 ntBASIC-0.43□□□□□ -2.48
SP4Q02446 CR383656.4-201ENST00000546909 122 ntBASIC-0.43□□□□□ -2.48
SP4Q02446 MIR148A-201ENST00000362215 68 ntBASIC-0.44□□□□□ -2.48
SP4Q02446 Y_RNA.158-201ENST00000363651 101 ntBASIC-0.44□□□□□ -2.48
SP4Q02446 RNU6-978P-201ENST00000364371 103 ntBASIC-0.44□□□□□ -2.48
SP4Q02446 RNU4-17P-201ENST00000365598 141 ntBASIC-0.44□□□□□ -2.48
SP4Q02446 RNY1P6-201ENST00000384193 109 ntBASIC-0.44□□□□□ -2.48
SP4Q02446 RNU6-474P-201ENST00000384243 107 ntBASIC-0.44□□□□□ -2.48
Retrieved 100 of 98,524 protein–RNA pairs in 251.9 ms