Protein–RNA interactions for Protein: P54259

ATN1, Atrophin-1, humanhuman

Predicted RBP Predictions only

Length 1,190 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATN1P54259 OR51L1-203ENST00000641819 7300 ntAPPRIS P1 BASIC3.38□□□□□ -1.87
ATN1P54259 SLC30A6-202ENST00000357055 4758 ntTSL 2 BASIC3.38□□□□□ -1.87
ATN1P54259 RNU6-403P-201ENST00000363163 104 ntBASIC3.38□□□□□ -1.87
ATN1P54259 RNU6-112P-201ENST00000363599 104 ntBASIC3.38□□□□□ -1.87
ATN1P54259 MIR1302-7-201ENST00000408841 72 ntBASIC3.38□□□□□ -1.87
ATN1P54259 MIR4506-201ENST00000584693 77 ntBASIC3.38□□□□□ -1.87
ATN1P54259 MAPK10-266ENST00000641066 6555 ntBASIC3.38□□□□□ -1.87
ATN1P54259 MACC1-202ENST00000400331 9159 ntAPPRIS P1 TSL 2 BASIC3.38□□□□□ -1.87
ATN1P54259 KNL1-202ENST00000399668 7607 ntAPPRIS ALT2 TSL 1 (best) BASIC3.37□□□□□ -1.87
ATN1P54259 RNU6ATAC3P-201ENST00000387974 126 ntBASIC3.37□□□□□ -1.87
ATN1P54259 SUMO2P12-201ENST00000405924 140 ntBASIC3.37□□□□□ -1.87
ATN1P54259 AC104332.2-201ENST00000429959 156 ntBASIC3.37□□□□□ -1.87
ATN1P54259 RNU6-1265P-201ENST00000516342 103 ntBASIC3.37□□□□□ -1.87
ATN1P54259 SNORA31.15-201ENST00000516771 132 ntBASIC3.37□□□□□ -1.87
ATN1P54259 Y_RNA.697-201ENST00000516776 113 ntBASIC3.37□□□□□ -1.87
ATN1P54259 AC015688.6-201ENST00000577737 104 ntBASIC3.37□□□□□ -1.87
ATN1P54259 GMFB-208ENST00000554908 6721 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
ATN1P54259 NEB-220ENST00000618972 26307 ntAPPRIS ALT2 TSL 5 BASIC3.37□□□□□ -1.87
ATN1P54259 RNU6-1123P-201ENST00000362347 106 ntBASIC3.36□□□□□ -1.87
ATN1P54259 RNU1-36P-201ENST00000365130 165 ntBASIC3.36□□□□□ -1.87
ATN1P54259 RNU1-138P-201ENST00000384093 164 ntBASIC3.36□□□□□ -1.87
ATN1P54259 RNU6-520P-201ENST00000384717 104 ntBASIC3.36□□□□□ -1.87
ATN1P54259 SNORA48.1-201ENST00000390879 135 ntBASIC3.36□□□□□ -1.87
ATN1P54259 RPL23AP42-201ENST00000471152 471 ntBASIC3.36□□□□□ -1.87
ATN1P54259 SNORD111.1-201ENST00000516421 86 ntBASIC3.36□□□□□ -1.87
ATN1P54259 AC022202.1-201ENST00000613515 211 ntBASIC3.36□□□□□ -1.87
ATN1P54259 uc_338.6-201ENST00000613544 171 ntBASIC3.36□□□□□ -1.87
ATN1P54259 MIR6509-201ENST00000614603 85 ntBASIC3.36□□□□□ -1.87
ATN1P54259 OR51A4-202ENST00000641898 4393 ntAPPRIS P1 BASIC3.36□□□□□ -1.87
ATN1P54259 AC073325.2-201ENST00000339545 159 ntBASIC3.35□□□□□ -1.87
ATN1P54259 RNU4ATAC16P-201ENST00000408512 126 ntBASIC3.35□□□□□ -1.87
ATN1P54259 MIR2115-201ENST00000516657 100 ntBASIC3.35□□□□□ -1.87
ATN1P54259 NEBL-202ENST00000377122 9216 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
ATN1P54259 RGPD3-202ENST00000409886 5594 ntAPPRIS P2 TSL 1 (best) BASIC3.35□□□□□ -1.87
ATN1P54259 MKLN1-201ENST00000352689 11156 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
ATN1P54259 SLITRK6-201ENST00000400286 4318 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
ATN1P54259 LUZP2-208ENST00000620308 4981 ntTSL 5 BASIC3.34□□□□□ -1.87
ATN1P54259 MIR196B-201ENST00000384852 84 ntBASIC3.34□□□□□ -1.87
ATN1P54259 MIR599-201ENST00000385069 95 ntBASIC3.34□□□□□ -1.87
ATN1P54259 MIR887-201ENST00000401258 79 ntBASIC3.34□□□□□ -1.87
ATN1P54259 RN7SL442P-201ENST00000473804 320 ntBASIC3.34□□□□□ -1.87
ATN1P54259 RNA5SP385-201ENST00000515947 110 ntBASIC3.34□□□□□ -1.87
ATN1P54259 C5orf51-201ENST00000381647 5241 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.88
ATN1P54259 ANKAR-209ENST00000520309 4410 ntAPPRIS P1 TSL 5 BASIC3.34□□□□□ -1.88
ATN1P54259 ROS1-202ENST00000368508 7435 ntAPPRIS P2 TSL 1 (best) BASIC3.33□□□□□ -1.88
ATN1P54259 FGF14-201ENST00000376131 12882 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
ATN1P54259 SNORA75.1-201ENST00000391130 148 ntBASIC3.33□□□□□ -1.88
ATN1P54259 AC087499.2-201ENST00000432861 149 ntBASIC3.33□□□□□ -1.88
ATN1P54259 MIR2276-201ENST00000516886 89 ntBASIC3.33□□□□□ -1.88
ATN1P54259 SNORA31.26-201ENST00000517250 137 ntBASIC3.33□□□□□ -1.88
ATN1P54259 MIR548AD-201ENST00000584780 82 ntBASIC3.33□□□□□ -1.88
ATN1P54259 MALAT1-207ENST00000613376 132 ntTSL 3 BASIC3.33□□□□□ -1.88
ATN1P54259 Evf-2_5p.1-201ENST00000614213 142 ntBASIC3.33□□□□□ -1.88
ATN1P54259 NBPF20-201ENST00000369373 18760 ntAPPRIS ALT2 TSL 5 BASIC3.32□□□□□ -1.88
ATN1P54259 MIR18B-201ENST00000454574 71 ntBASIC3.32□□□□□ -1.88
ATN1P54259 AC079600.2-201ENST00000550076 130 ntBASIC3.32□□□□□ -1.88
ATN1P54259 AC093010.3-201ENST00000570269 15214 ntBASIC3.32□□□□□ -1.88
ATN1P54259 PTBP2-211ENST00000609116 12014 ntAPPRIS ALT1 TSL 1 (best) BASIC3.31□□□□□ -1.88
ATN1P54259 KTN1-206ENST00000413890 4473 ntAPPRIS ALT2 TSL 5 BASIC3.31□□□□□ -1.88
ATN1P54259 KCNIP4-IT1-201ENST00000627566 9848 ntBASIC3.31□□□□□ -1.88
ATN1P54259 ERBIN-202ENST00000380935 6692 ntTSL 5 BASIC3.31□□□□□ -1.88
ATN1P54259 RNU6-495P-201ENST00000362995 107 ntBASIC3.31□□□□□ -1.88
ATN1P54259 RNA5SP465-201ENST00000391195 109 ntBASIC3.31□□□□□ -1.88
ATN1P54259 AL359511.1-201ENST00000402970 211 ntBASIC3.31□□□□□ -1.88
ATN1P54259 MIR1283-2-201ENST00000408621 87 ntBASIC3.31□□□□□ -1.88
ATN1P54259 RN7SKP123-201ENST00000410732 291 ntBASIC3.31□□□□□ -1.88
ATN1P54259 SNORD109B-201ENST00000458961 67 ntBASIC3.31□□□□□ -1.88
ATN1P54259 SNORD109A-201ENST00000459128 67 ntBASIC3.31□□□□□ -1.88
ATN1P54259 AC008413.1-201ENST00000511864 177 ntBASIC3.31□□□□□ -1.88
ATN1P54259 AC138907.6-201ENST00000568401 126 ntBASIC3.31□□□□□ -1.88
ATN1P54259 AC138869.1-201ENST00000568623 124 ntBASIC3.31□□□□□ -1.88
ATN1P54259 IGKV1OR2-6-201ENST00000603485 277 ntBASIC3.31□□□□□ -1.88
ATN1P54259 AC108206.1-201ENST00000570186 4159 ntBASIC3.31□□□□□ -1.88
ATN1P54259 FAM46D-201ENST00000308293 3011 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
ATN1P54259 ZMYM1-201ENST00000359858 4175 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
ATN1P54259 MIR377-201ENST00000362145 69 ntBASIC3.3□□□□□ -1.88
ATN1P54259 HMGN2P3-201ENST00000433603 273 ntBASIC3.3□□□□□ -1.88
ATN1P54259 HMGN2P5-201ENST00000436882 273 ntBASIC3.3□□□□□ -1.88
ATN1P54259 AP004217.1-201ENST00000480579 346 ntBASIC3.3□□□□□ -1.88
ATN1P54259 NBPF20-202ENST00000392971 18450 ntAPPRIS P2 TSL 5 BASIC3.3□□□□□ -1.88
ATN1P54259 RPS27-201ENST00000368567 350 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
ATN1P54259 SNORD21-201ENST00000383953 95 ntBASIC3.29□□□□□ -1.88
ATN1P54259 TRAJ31-201ENST00000390506 57 ntAPPRIS P1 BASIC3.29□□□□□ -1.88
ATN1P54259 AL355388.1-201ENST00000415726 401 ntTSL 2 BASIC3.29□□□□□ -1.88
ATN1P54259 RNU6-287P-201ENST00000516230 98 ntBASIC3.29□□□□□ -1.88
ATN1P54259 RNU6-902P-201ENST00000517212 91 ntBASIC3.29□□□□□ -1.88
ATN1P54259 MIR3126-201ENST00000577443 74 ntBASIC3.29□□□□□ -1.88
ATN1P54259 MIR3192-201ENST00000584920 77 ntBASIC3.29□□□□□ -1.88
ATN1P54259 ARHGAP28-204ENST00000419673 5492 ntAPPRIS P2 TSL 1 (best) BASIC3.29□□□□□ -1.88
ATN1P54259 AP006437.1-201ENST00000641440 3685 ntBASIC3.29□□□□□ -1.88
ATN1P54259 LEPR-202ENST00000349533 8227 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
ATN1P54259 RNA5SP383-201ENST00000362934 120 ntBASIC3.28□□□□□ -1.88
ATN1P54259 MIR203A-201ENST00000384836 110 ntBASIC3.28□□□□□ -1.88
ATN1P54259 RN7SL274P-201ENST00000492268 272 ntBASIC3.28□□□□□ -1.88
ATN1P54259 RNU6-1089P-201ENST00000516473 104 ntBASIC3.28□□□□□ -1.88
ATN1P54259 RNU6-980P-201ENST00000516925 103 ntBASIC3.28□□□□□ -1.88
ATN1P54259 DEFB122-202ENST00000569013 197 ntBASIC3.28□□□□□ -1.88
ATN1P54259 MIR6082-201ENST00000613604 109 ntBASIC3.28□□□□□ -1.88
ATN1P54259 SIRT1-203ENST00000406900 3295 ntTSL 2 BASIC3.28□□□□□ -1.88
ATN1P54259 CHD9-203ENST00000447540 11509 ntTSL 5 BASIC3.28□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 208.6 ms