Protein–RNA interactions for Protein: P53384

NUBP1, Cytosolic Fe-S cluster assembly factor NUBP1, humanhuman

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUBP1P53384 RNU6-719P-201ENST00000516671 104 ntBASIC3.22□□□□□ -1.89
NUBP1P53384 5S_rRNA.15-201ENST00000611169 127 ntBASIC3.22□□□□□ -1.89
NUBP1P53384 DLEU2_3.2-201ENST00000612883 73 ntBASIC3.22□□□□□ -1.89
NUBP1P53384 MIR7153-201ENST00000637758 57 ntBASIC3.22□□□□□ -1.89
NUBP1P53384 TAB2-205ENST00000538427 4240 ntAPPRIS P1 TSL 5 BASIC3.22□□□□□ -1.89
NUBP1P53384 TTN-204ENST00000360870 18218 ntTSL 5 BASIC3.22□□□□□ -1.89
NUBP1P53384 AC025164.2-202ENST00000499685 5699 ntTSL 3 BASIC3.22□□□□□ -1.89
NUBP1P53384 ADGRV1-201ENST00000405460 19557 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
NUBP1P53384 CEP85L-202ENST00000368488 7118 ntTSL 5 BASIC3.21□□□□□ -1.9
NUBP1P53384 Y_RNA.13-201ENST00000362403 112 ntBASIC3.21□□□□□ -1.9
NUBP1P53384 AC022018.1-201ENST00000430685 241 ntBASIC3.21□□□□□ -1.9
NUBP1P53384 RNA5SP380-201ENST00000517190 98 ntBASIC3.21□□□□□ -1.9
NUBP1P53384 PHF3-202ENST00000393387 6947 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
NUBP1P53384 PIK3C2G-206ENST00000538779 4963 ntTSL 5 BASIC3.21□□□□□ -1.9
NUBP1P53384 AL359851.1-201ENST00000569460 4997 ntBASIC3.2□□□□□ -1.9
NUBP1P53384 NEB-204ENST00000409198 20637 ntAPPRIS P3 TSL 5 BASIC3.2□□□□□ -1.9
NUBP1P53384 RNU6-654P-201ENST00000364373 107 ntBASIC3.2□□□□□ -1.9
NUBP1P53384 RNU6-669P-201ENST00000365575 107 ntBASIC3.2□□□□□ -1.9
NUBP1P53384 MIR599-201ENST00000385069 95 ntBASIC3.2□□□□□ -1.9
NUBP1P53384 RNU6-604P-201ENST00000390917 100 ntBASIC3.2□□□□□ -1.9
NUBP1P53384 AC110620.1-201ENST00000416042 228 ntBASIC3.2□□□□□ -1.9
NUBP1P53384 snoU13.26-201ENST00000459452 105 ntBASIC3.2□□□□□ -1.9
NUBP1P53384 AC107016.2-201ENST00000547968 190 ntBASIC3.2□□□□□ -1.9
NUBP1P53384 MIR2682-201ENST00000580305 110 ntBASIC3.2□□□□□ -1.9
NUBP1P53384 AP005264.4-201ENST00000592203 422 ntTSL 5 BASIC3.2□□□□□ -1.9
NUBP1P53384 ZNF658B-202ENST00000615961 3375 ntBASIC3.2□□□□□ -1.9
NUBP1P53384 LTN1-207ENST00000614971 7756 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
NUBP1P53384 SNORD116-24-201ENST00000384549 92 ntBASIC3.19□□□□□ -1.9
NUBP1P53384 SNORD15B-201ENST00000384714 146 ntBASIC3.19□□□□□ -1.9
NUBP1P53384 RNA5SP212-201ENST00000391223 107 ntBASIC3.19□□□□□ -1.9
NUBP1P53384 U3.27-201ENST00000391237 200 ntBASIC3.19□□□□□ -1.9
NUBP1P53384 RNA5SP95-201ENST00000410319 137 ntBASIC3.19□□□□□ -1.9
NUBP1P53384 RNA5SP293-201ENST00000410527 113 ntBASIC3.19□□□□□ -1.9
NUBP1P53384 TFEC-202ENST00000320239 6605 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
NUBP1P53384 MKLN1-201ENST00000352689 11156 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
NUBP1P53384 SKIL-204ENST00000458537 7182 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
NUBP1P53384 SYT14-201ENST00000367015 5094 ntAPPRIS ALT2 TSL 1 (best) BASIC3.18□□□□□ -1.9
NUBP1P53384 RNU6-1177P-201ENST00000391058 104 ntBASIC3.18□□□□□ -1.9
NUBP1P53384 snoU13.25-201ENST00000458945 104 ntBASIC3.18□□□□□ -1.9
NUBP1P53384 MIR4773-1-201ENST00000637203 78 ntBASIC3.18□□□□□ -1.9
NUBP1P53384 SLC5A3-201ENST00000381151 11576 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
NUBP1P53384 SLC4A7-201ENST00000295736 7757 ntAPPRIS P3 TSL 1 (best) BASIC3.17□□□□□ -1.9
NUBP1P53384 USP15-203ENST00000353364 14950 ntAPPRIS P3 TSL 1 (best) BASIC3.17□□□□□ -1.9
NUBP1P53384 VPS13C-203ENST00000395896 14579 ntAPPRIS ALT2 TSL 1 (best) BASIC3.17□□□□□ -1.9
NUBP1P53384 MIR2113-201ENST00000459007 91 ntBASIC3.17□□□□□ -1.9
NUBP1P53384 uc_338.1-201ENST00000612113 180 ntBASIC3.17□□□□□ -1.9
NUBP1P53384 PKHD1L1-201ENST00000378402 13076 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
NUBP1P53384 PHF6-201ENST00000332070 4759 ntAPPRIS P2 TSL 1 (best) BASIC3.16□□□□□ -1.9
NUBP1P53384 RNA5SP385-201ENST00000515947 110 ntBASIC3.16□□□□□ -1.9
NUBP1P53384 AC015688.6-201ENST00000577737 104 ntBASIC3.16□□□□□ -1.9
NUBP1P53384 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
NUBP1P53384 AL021368.2-201ENST00000606125 5352 ntBASIC3.15□□□□□ -1.9
NUBP1P53384 RPS27-201ENST00000368567 350 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
NUBP1P53384 MIR887-201ENST00000401258 79 ntBASIC3.15□□□□□ -1.91
NUBP1P53384 RNU7-193P-201ENST00000516723 65 ntBASIC3.15□□□□□ -1.91
NUBP1P53384 ZNFX1-AS1_2.1-201ENST00000610973 93 ntBASIC3.15□□□□□ -1.91
NUBP1P53384 JMJD1C-210ENST00000542921 8149 ntAPPRIS ALT2 TSL 1 (best) BASIC3.15□□□□□ -1.91
NUBP1P53384 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
NUBP1P53384 MAPK10-266ENST00000641066 6555 ntBASIC3.15□□□□□ -1.91
NUBP1P53384 KIAA1109-203ENST00000388738 15574 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
NUBP1P53384 OXR1-209ENST00000517566 4501 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
NUBP1P53384 AC108938.1-201ENST00000451204 136 ntBASIC3.14□□□□□ -1.91
NUBP1P53384 ZNF804B-202ENST00000611114 3968 ntTSL 5 BASIC3.13□□□□□ -1.91
NUBP1P53384 CCSER2-201ENST00000224756 7664 ntAPPRIS P1 TSL 5 BASIC3.13□□□□□ -1.91
NUBP1P53384 ZMYM2-203ENST00000382874 10139 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
NUBP1P53384 SNORA3A-201ENST00000364113 130 ntBASIC3.13□□□□□ -1.91
NUBP1P53384 RNU6ATAC6P-201ENST00000408132 126 ntBASIC3.13□□□□□ -1.91
NUBP1P53384 Y_RNA.676-201ENST00000516393 96 ntBASIC3.13□□□□□ -1.91
NUBP1P53384 IST1-227ENST00000626438 126 ntTSL 5 BASIC3.13□□□□□ -1.91
NUBP1P53384 CREBRF-201ENST00000296953 7778 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
NUBP1P53384 AKAP9-202ENST00000358100 10309 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
NUBP1P53384 HECTD2-202ENST00000371667 4354 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
NUBP1P53384 MIR22-201ENST00000362190 85 ntBASIC3.12□□□□□ -1.91
NUBP1P53384 AC244098.3-201ENST00000424803 96 ntBASIC3.12□□□□□ -1.91
NUBP1P53384 AL513328.1-201ENST00000446460 224 ntBASIC3.12□□□□□ -1.91
NUBP1P53384 AL357793.1-201ENST00000448412 401 ntTSL 5 BASIC3.12□□□□□ -1.91
NUBP1P53384 snoU13.15-201ENST00000459407 104 ntBASIC3.12□□□□□ -1.91
NUBP1P53384 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC3.12□□□□□ -1.91
NUBP1P53384 ANGPTL3-201ENST00000371129 2805 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
NUBP1P53384 DPP10-205ENST00000410059 6278 ntAPPRIS ALT2 TSL 1 (best) BASIC3.11□□□□□ -1.91
NUBP1P53384 HDX-201ENST00000297977 6200 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
NUBP1P53384 U8.2-201ENST00000363156 134 ntBASIC3.11□□□□□ -1.91
NUBP1P53384 SNORA40.6-201ENST00000391153 128 ntBASIC3.11□□□□□ -1.91
NUBP1P53384 RNU6-1265P-201ENST00000516342 103 ntBASIC3.11□□□□□ -1.91
NUBP1P53384 OR2J3-203ENST00000641960 3342 ntAPPRIS P1 BASIC3.11□□□□□ -1.91
NUBP1P53384 UBE2W-203ENST00000517608 8426 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
NUBP1P53384 ATP11C-201ENST00000327569 6115 ntAPPRIS P3 TSL 1 (best) BASIC3.1□□□□□ -1.91
NUBP1P53384 WRN-201ENST00000298139 5215 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
NUBP1P53384 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC3.1□□□□□ -1.91
NUBP1P53384 U8.9-201ENST00000365667 134 ntBASIC3.1□□□□□ -1.91
NUBP1P53384 RNU6-439P-201ENST00000384188 106 ntBASIC3.1□□□□□ -1.91
NUBP1P53384 RNA5SP229-201ENST00000410809 99 ntBASIC3.1□□□□□ -1.91
NUBP1P53384 AC079150.2-201ENST00000443733 78 ntBASIC3.1□□□□□ -1.91
NUBP1P53384 snoU13.23-201ENST00000458863 104 ntBASIC3.1□□□□□ -1.91
NUBP1P53384 RNA5SP24-201ENST00000516478 95 ntBASIC3.1□□□□□ -1.91
NUBP1P53384 MIR4506-201ENST00000584693 77 ntBASIC3.1□□□□□ -1.91
NUBP1P53384 Evf-2_5p.1-201ENST00000614213 142 ntBASIC3.1□□□□□ -1.91
NUBP1P53384 TAB3-205ENST00000378933 6671 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
NUBP1P53384 RNU1-52P-201ENST00000384190 164 ntBASIC3.09□□□□□ -1.91
NUBP1P53384 MIR633-201ENST00000384821 98 ntBASIC3.09□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 129.2 ms