Protein–RNA interactions for Protein: P13612

ITGA4, Integrin alpha-4, humanhuman

Predictions only

Length 1,032 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA4P13612 AC245517.4-201ENST00000448601 281 ntBASIC1.77□□□□□ -2.13
ITGA4P13612 RNU6-795P-201ENST00000516323 103 ntBASIC1.77□□□□□ -2.13
ITGA4P13612 RN7SKP88-201ENST00000516847 250 ntBASIC1.77□□□□□ -2.13
ITGA4P13612 AC024382.1-201ENST00000520224 292 ntTSL 3 BASIC1.77□□□□□ -2.13
ITGA4P13612 7SK.8-201ENST00000612110 250 ntBASIC1.77□□□□□ -2.13
ITGA4P13612 7SK.11-201ENST00000615477 250 ntBASIC1.77□□□□□ -2.13
ITGA4P13612 7SK.13-201ENST00000622040 250 ntBASIC1.77□□□□□ -2.13
ITGA4P13612 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC1.77□□□□□ -2.13
ITGA4P13612 TFEC-204ENST00000457268 6309 ntTSL 3 BASIC1.76□□□□□ -2.13
ITGA4P13612 RNU6-1165P-201ENST00000410119 107 ntBASIC1.76□□□□□ -2.13
ITGA4P13612 BTF3P4-201ENST00000418852 495 ntBASIC1.76□□□□□ -2.13
ITGA4P13612 AC048334.1-201ENST00000477975 159 ntBASIC1.76□□□□□ -2.13
ITGA4P13612 Y_RNA.659-201ENST00000515994 113 ntBASIC1.76□□□□□ -2.13
ITGA4P13612 SNORD53B-201ENST00000577887 78 ntBASIC1.76□□□□□ -2.13
ITGA4P13612 uc_338.6-201ENST00000613544 171 ntBASIC1.76□□□□□ -2.13
ITGA4P13612 MIR376B-201ENST00000614515 100 ntBASIC1.76□□□□□ -2.13
ITGA4P13612 AC012531.4-201ENST00000616509 177 ntBASIC1.76□□□□□ -2.13
ITGA4P13612 AC091304.10-201ENST00000641554 121 ntBASIC1.76□□□□□ -2.13
ITGA4P13612 MIR377-201ENST00000362145 69 ntBASIC1.75□□□□□ -2.13
ITGA4P13612 RNU6-170P-201ENST00000362832 104 ntBASIC1.75□□□□□ -2.13
ITGA4P13612 Y_RNA.247-201ENST00000364500 92 ntBASIC1.75□□□□□ -2.13
ITGA4P13612 MIR488-201ENST00000365739 83 ntBASIC1.75□□□□□ -2.13
ITGA4P13612 Y_RNA.466-201ENST00000384294 113 ntBASIC1.75□□□□□ -2.13
ITGA4P13612 RNU6ATAC3P-201ENST00000387974 126 ntBASIC1.75□□□□□ -2.13
ITGA4P13612 MIR934-201ENST00000401241 83 ntBASIC1.75□□□□□ -2.13
ITGA4P13612 RNU6ATAC41P-201ENST00000408600 126 ntBASIC1.75□□□□□ -2.13
ITGA4P13612 RNU7-48P-201ENST00000458875 63 ntBASIC1.75□□□□□ -2.13
ITGA4P13612 MIR2052-201ENST00000636055 55 ntBASIC1.75□□□□□ -2.13
ITGA4P13612 MIR30D-201ENST00000362283 70 ntBASIC1.74□□□□□ -2.13
ITGA4P13612 SNORD45B-201ENST00000364617 72 ntBASIC1.74□□□□□ -2.13
ITGA4P13612 RNU6-1131P-201ENST00000364955 107 ntBASIC1.74□□□□□ -2.13
ITGA4P13612 RNU6-447P-201ENST00000410293 104 ntBASIC1.74□□□□□ -2.13
ITGA4P13612 RNU6-1118P-201ENST00000410382 104 ntBASIC1.74□□□□□ -2.13
ITGA4P13612 RNU6-1076P-201ENST00000410397 104 ntBASIC1.74□□□□□ -2.13
ITGA4P13612 RNU6-355P-201ENST00000410427 104 ntBASIC1.74□□□□□ -2.13
ITGA4P13612 RNU6-791P-201ENST00000410467 104 ntBASIC1.74□□□□□ -2.13
ITGA4P13612 RNU6-705P-201ENST00000410601 104 ntBASIC1.74□□□□□ -2.13
ITGA4P13612 RNU6-1100P-201ENST00000410691 104 ntBASIC1.74□□□□□ -2.13
ITGA4P13612 RNU6-860P-201ENST00000410860 104 ntBASIC1.74□□□□□ -2.13
ITGA4P13612 RNU6-1217P-201ENST00000411276 104 ntBASIC1.74□□□□□ -2.13
ITGA4P13612 RNU6-785P-201ENST00000411324 104 ntBASIC1.74□□□□□ -2.13
ITGA4P13612 RPS29P28-201ENST00000446439 141 ntBASIC1.74□□□□□ -2.13
ITGA4P13612 RNU6-1006P-201ENST00000516998 103 ntBASIC1.74□□□□□ -2.13
ITGA4P13612 MIR4498-201ENST00000577599 66 ntBASIC1.74□□□□□ -2.13
ITGA4P13612 SNORA4-201ENST00000584302 138 ntBASIC1.74□□□□□ -2.13
ITGA4P13612 MIR548Z-201ENST00000584743 97 ntBASIC1.74□□□□□ -2.13
ITGA4P13612 AC096720.1-201ENST00000604441 183 ntBASIC1.74□□□□□ -2.13
ITGA4P13612 U6.90-201ENST00000614007 104 ntBASIC1.74□□□□□ -2.13
ITGA4P13612 U6.70-201ENST00000620287 104 ntBASIC1.74□□□□□ -2.13
ITGA4P13612 NFIA-AS1-206ENST00000630199 220 ntTSL 5 BASIC1.74□□□□□ -2.13
ITGA4P13612 AC068733.3-201ENST00000632757 269 ntTSL 3 BASIC1.74□□□□□ -2.13
ITGA4P13612 SKIL-204ENST00000458537 7182 ntAPPRIS P1 TSL 1 (best) BASIC1.74□□□□□ -2.13
ITGA4P13612 RNU6-1054P-201ENST00000411293 104 ntBASIC1.73□□□□□ -2.13
ITGA4P13612 AC004941.2-201ENST00000427009 228 ntBASIC1.73□□□□□ -2.13
ITGA4P13612 SNORA31.2-201ENST00000516019 134 ntBASIC1.73□□□□□ -2.13
ITGA4P13612 RNU6-902P-201ENST00000517212 91 ntBASIC1.73□□□□□ -2.13
ITGA4P13612 AC133485.1-201ENST00000567176 124 ntBASIC1.73□□□□□ -2.13
ITGA4P13612 Y_RNA.98-201ENST00000363109 102 ntBASIC1.72□□□□□ -2.13
ITGA4P13612 RNU1-42P-201ENST00000364033 160 ntBASIC1.72□□□□□ -2.13
ITGA4P13612 Y_RNA.369-201ENST00000365568 117 ntBASIC1.72□□□□□ -2.13
ITGA4P13612 RNU7-61P-201ENST00000515897 61 ntBASIC1.72□□□□□ -2.13
ITGA4P13612 AC006254.2-201ENST00000603259 279 ntBASIC1.72□□□□□ -2.13
ITGA4P13612 snoU13.31-201ENST00000607291 104 ntBASIC1.72□□□□□ -2.13
ITGA4P13612 SEPT14P17-201ENST00000617978 177 ntBASIC1.72□□□□□ -2.13
ITGA4P13612 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC1.72□□□□□ -2.13
ITGA4P13612 Y_RNA.95-201ENST00000363079 95 ntBASIC1.71□□□□□ -2.14
ITGA4P13612 RNU6-60P-201ENST00000364792 103 ntBASIC1.71□□□□□ -2.14
ITGA4P13612 Y_RNA.330-201ENST00000365230 109 ntBASIC1.71□□□□□ -2.14
ITGA4P13612 AC096949.1-201ENST00000412047 152 ntBASIC1.71□□□□□ -2.14
ITGA4P13612 AP1B1P2-201ENST00000416196 106 ntBASIC1.71□□□□□ -2.14
ITGA4P13612 MIR4777-201ENST00000583710 86 ntBASIC1.71□□□□□ -2.14
ITGA4P13612 AL645939.4-201ENST00000604495 135 ntBASIC1.71□□□□□ -2.14
ITGA4P13612 BX248123.2-201ENST00000606318 124 ntBASIC1.71□□□□□ -2.14
ITGA4P13612 AL512598.1-201ENST00000610158 273 ntBASIC1.71□□□□□ -2.14
ITGA4P13612 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC1.71□□□□□ -2.14
ITGA4P13612 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC1.7□□□□□ -2.14
ITGA4P13612 Y_RNA.168-201ENST00000363740 102 ntBASIC1.7□□□□□ -2.14
ITGA4P13612 SNORD38.1-201ENST00000363863 68 ntBASIC1.7□□□□□ -2.14
ITGA4P13612 RNU6-580P-201ENST00000365159 107 ntBASIC1.7□□□□□ -2.14
ITGA4P13612 Y_RNA.342-201ENST00000365352 113 ntBASIC1.7□□□□□ -2.14
ITGA4P13612 RNU6-49P-201ENST00000384256 107 ntBASIC1.7□□□□□ -2.14
ITGA4P13612 SNORA2B-201ENST00000384583 137 ntBASIC1.7□□□□□ -2.14
ITGA4P13612 MT-TF-201ENST00000387314 71 ntBASIC1.7□□□□□ -2.14
ITGA4P13612 U8.15-201ENST00000390947 134 ntBASIC1.7□□□□□ -2.14
ITGA4P13612 SNORA67.6-201ENST00000391093 99 ntBASIC1.7□□□□□ -2.14
ITGA4P13612 SNORA75.2-201ENST00000391138 150 ntBASIC1.7□□□□□ -2.14
ITGA4P13612 RNU6-644P-201ENST00000391155 98 ntBASIC1.7□□□□□ -2.14
ITGA4P13612 SNORA75.3-201ENST00000391231 150 ntBASIC1.7□□□□□ -2.14
ITGA4P13612 MRPL35P3-201ENST00000421557 364 ntBASIC1.7□□□□□ -2.14
ITGA4P13612 RNU6-1053P-201ENST00000515930 101 ntBASIC1.7□□□□□ -2.14
ITGA4P13612 MALAT1.1-201ENST00000618249 95 ntBASIC1.7□□□□□ -2.14
ITGA4P13612 AP001362.1-201ENST00000625165 124 ntBASIC1.7□□□□□ -2.14
ITGA4P13612 Y_RNA.363-201ENST00000365529 113 ntBASIC1.69□□□□□ -2.14
ITGA4P13612 Y_RNA.467-201ENST00000384297 102 ntBASIC1.69□□□□□ -2.14
ITGA4P13612 MIR517C-201ENST00000385103 95 ntBASIC1.69□□□□□ -2.14
ITGA4P13612 RNY1P7-201ENST00000384743 110 ntBASIC1.68□□□□□ -2.14
ITGA4P13612 AC109327.2-201ENST00000448339 378 ntBASIC1.68□□□□□ -2.14
ITGA4P13612 RNU7-95P-201ENST00000459222 64 ntBASIC1.68□□□□□ -2.14
ITGA4P13612 MIR4679-1-201ENST00000637619 75 ntBASIC1.68□□□□□ -2.14
ITGA4P13612 KIAA1107-201ENST00000370378 4622 ntTSL 5 BASIC1.68□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 169.9 ms