Protein–RNA interactions for Protein: O43196

MSH5, MutS protein homolog 5, humanhuman

Predictions only

Length 834 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5O43196 CSNK1G3-202ENST00000360683 4047 ntAPPRIS ALT2 TSL 1 (best) BASIC4.68□□□□□ -1.66
MSH5O43196 RNU4-35P-201ENST00000362588 141 ntBASIC4.67□□□□□ -1.66
MSH5O43196 SNORD41-201ENST00000386967 70 ntBASIC4.67□□□□□ -1.66
MSH5O43196 AL645939.4-201ENST00000604495 135 ntBASIC4.67□□□□□ -1.66
MSH5O43196 MIR7112-201ENST00000616126 65 ntBASIC4.67□□□□□ -1.66
MSH5O43196 POU2F1-204ENST00000367866 13905 ntAPPRIS P3 TSL 1 (best) BASIC4.67□□□□□ -1.66
MSH5O43196 MIR579-201ENST00000385221 98 ntBASIC4.66□□□□□ -1.66
MSH5O43196 MIR1289-1-201ENST00000408836 144 ntBASIC4.66□□□□□ -1.66
MSH5O43196 COTL1P1-201ENST00000422309 375 ntBASIC4.66□□□□□ -1.66
MSH5O43196 MIR2276-201ENST00000516886 89 ntBASIC4.66□□□□□ -1.66
MSH5O43196 AL359821.1-201ENST00000605519 182 ntBASIC4.66□□□□□ -1.66
MSH5O43196 AC012531.5-201ENST00000611375 151 ntBASIC4.66□□□□□ -1.66
MSH5O43196 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC4.65□□□□□ -1.67
MSH5O43196 SNORD111B-201ENST00000408587 80 ntBASIC4.65□□□□□ -1.67
MSH5O43196 AP001486.2-201ENST00000561652 5113 ntBASIC4.65□□□□□ -1.67
MSH5O43196 SYCP2-202ENST00000371001 5479 ntAPPRIS P2 TSL 1 (best) BASIC4.65□□□□□ -1.67
MSH5O43196 CGGBP1-202ENST00000398392 5298 ntAPPRIS P1 BASIC4.65□□□□□ -1.67
MSH5O43196 SMARCAD1-201ENST00000354268 4912 ntAPPRIS P3 TSL 1 (best) BASIC4.64□□□□□ -1.67
MSH5O43196 IDE-201ENST00000265986 5877 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
MSH5O43196 SNORD83.1-201ENST00000411362 77 ntBASIC4.64□□□□□ -1.67
MSH5O43196 ADGRL2-211ENST00000370730 6173 ntTSL 5 BASIC4.64□□□□□ -1.67
MSH5O43196 AC025164.2-202ENST00000499685 5699 ntTSL 3 BASIC4.64□□□□□ -1.67
MSH5O43196 NR3C1-202ENST00000343796 7286 ntAPPRIS P3 TSL 5 BASIC4.63□□□□□ -1.67
MSH5O43196 RNA5SP403-201ENST00000363598 108 ntBASIC4.63□□□□□ -1.67
MSH5O43196 RNA5SP139-201ENST00000364340 117 ntBASIC4.63□□□□□ -1.67
MSH5O43196 RNA5SP344-201ENST00000411081 104 ntBASIC4.63□□□□□ -1.67
MSH5O43196 HMGN2P38-201ENST00000423806 265 ntBASIC4.63□□□□□ -1.67
MSH5O43196 snoU13.25-201ENST00000458945 104 ntBASIC4.63□□□□□ -1.67
MSH5O43196 RN7SL633P-201ENST00000488974 297 ntBASIC4.63□□□□□ -1.67
MSH5O43196 FOXP2-227ENST00000638397 240 ntTSL 5 BASIC4.63□□□□□ -1.67
MSH5O43196 DICER1-203ENST00000526495 10331 ntAPPRIS P1 TSL 5 BASIC4.63□□□□□ -1.67
MSH5O43196 CCDC168-201ENST00000322527 21466 ntAPPRIS P1 TSL 3 BASIC4.63□□□□□ -1.67
MSH5O43196 STEAP4-202ENST00000380079 9988 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
MSH5O43196 SYNE1-207ENST00000367255 27748 ntAPPRIS P4 TSL 1 (best) BASIC4.62□□□□□ -1.67
MSH5O43196 MIR148B-201ENST00000362252 99 ntBASIC4.62□□□□□ -1.67
MSH5O43196 RNA5SP374-201ENST00000362939 125 ntBASIC4.62□□□□□ -1.67
MSH5O43196 RNA5SP424-201ENST00000390988 115 ntBASIC4.62□□□□□ -1.67
MSH5O43196 Y_RNA.633-201ENST00000459107 95 ntBASIC4.62□□□□□ -1.67
MSH5O43196 RNU6-922P-201ENST00000516753 99 ntBASIC4.62□□□□□ -1.67
MSH5O43196 RNU6-711P-201ENST00000517255 106 ntBASIC4.62□□□□□ -1.67
MSH5O43196 MAP3K7-202ENST00000369325 4633 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
MSH5O43196 FNDC3A-202ENST00000398316 5714 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
MSH5O43196 RNA5SP42-201ENST00000364278 115 ntBASIC4.61□□□□□ -1.67
MSH5O43196 MIR1185-1-201ENST00000408598 86 ntBASIC4.61□□□□□ -1.67
MSH5O43196 MIR4325-201ENST00000583049 90 ntBASIC4.61□□□□□ -1.67
MSH5O43196 AP000553.6-201ENST00000641242 118 ntBASIC4.61□□□□□ -1.67
MSH5O43196 SKIL-204ENST00000458537 7182 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
MSH5O43196 RNU6ATAC6P-201ENST00000408132 126 ntBASIC4.6□□□□□ -1.67
MSH5O43196 MIR1283-2-201ENST00000408621 87 ntBASIC4.6□□□□□ -1.67
MSH5O43196 HMGN2P3-201ENST00000433603 273 ntBASIC4.6□□□□□ -1.67
MSH5O43196 HMGN2P5-201ENST00000436882 273 ntBASIC4.6□□□□□ -1.67
MSH5O43196 MBNL1-206ENST00000357472 5256 ntTSL 5 BASIC4.6□□□□□ -1.67
MSH5O43196 MBNL1-223ENST00000498502 5258 ntTSL 5 BASIC4.6□□□□□ -1.67
MSH5O43196 NCAM2-201ENST00000284894 4699 ntAPPRIS ALT2 TSL 5 BASIC4.59□□□□□ -1.67
MSH5O43196 PPP1R9A-208ENST00000456331 10090 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
MSH5O43196 Y_RNA.69-201ENST00000362885 109 ntBASIC4.59□□□□□ -1.67
MSH5O43196 SNORD115-24-201ENST00000363528 82 ntBASIC4.59□□□□□ -1.67
MSH5O43196 RNU6-203P-201ENST00000384038 104 ntBASIC4.59□□□□□ -1.67
MSH5O43196 MIR125B2-201ENST00000385128 89 ntBASIC4.59□□□□□ -1.67
MSH5O43196 AC105272.1-201ENST00000438604 198 ntBASIC4.59□□□□□ -1.67
MSH5O43196 MIR5680-201ENST00000577577 84 ntBASIC4.59□□□□□ -1.67
MSH5O43196 C5orf42-205ENST00000508244 11062 ntAPPRIS P2 TSL 5 BASIC4.59□□□□□ -1.67
MSH5O43196 RTN4-208ENST00000404909 4102 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
MSH5O43196 ADAT2-203ENST00000606514 6651 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
MSH5O43196 SNORD114-4-201ENST00000363962 75 ntBASIC4.58□□□□□ -1.68
MSH5O43196 RNU7-161P-201ENST00000517289 62 ntBASIC4.58□□□□□ -1.68
MSH5O43196 FZD3-201ENST00000240093 13736 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
MSH5O43196 PLCL1-203ENST00000437704 5979 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
MSH5O43196 USP33-201ENST00000357428 4155 ntTSL 5 BASIC4.57□□□□□ -1.68
MSH5O43196 AGL-206ENST00000370165 7106 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
MSH5O43196 RNA5SP383-201ENST00000362934 120 ntBASIC4.57□□□□□ -1.68
MSH5O43196 Y_RNA.206-201ENST00000364136 102 ntBASIC4.57□□□□□ -1.68
MSH5O43196 RNU6-805P-201ENST00000365643 106 ntBASIC4.57□□□□□ -1.68
MSH5O43196 SNORD17-201ENST00000390930 237 ntBASIC4.57□□□□□ -1.68
MSH5O43196 AL451105.1-201ENST00000450005 189 ntBASIC4.57□□□□□ -1.68
MSH5O43196 RNU7-104P-201ENST00000459398 79 ntBASIC4.57□□□□□ -1.68
MSH5O43196 RN7SL429P-201ENST00000479090 223 ntBASIC4.57□□□□□ -1.68
MSH5O43196 RN7SL489P-201ENST00000486185 223 ntBASIC4.57□□□□□ -1.68
MSH5O43196 RN7SL327P-201ENST00000488659 223 ntBASIC4.57□□□□□ -1.68
MSH5O43196 RNU6-518P-201ENST00000516056 96 ntBASIC4.57□□□□□ -1.68
MSH5O43196 RN7SL853P-201ENST00000617250 223 ntBASIC4.57□□□□□ -1.68
MSH5O43196 CACNB4-260ENST00000637762 3800 ntTSL 5 BASIC4.56□□□□□ -1.68
MSH5O43196 RNU6-485P-201ENST00000363475 107 ntBASIC4.56□□□□□ -1.68
MSH5O43196 MIR548H4-201ENST00000408689 111 ntBASIC4.56□□□□□ -1.68
MSH5O43196 RPS26P5-201ENST00000418544 335 ntBASIC4.56□□□□□ -1.68
MSH5O43196 RNA5SP341-201ENST00000516261 117 ntBASIC4.56□□□□□ -1.68
MSH5O43196 PPIP5K2-203ENST00000414217 5842 ntAPPRIS P3 TSL 1 (best) BASIC4.56□□□□□ -1.68
MSH5O43196 DCLRE1A-202ENST00000369305 4241 ntAPPRIS P1 TSL 5 BASIC4.56□□□□□ -1.68
MSH5O43196 PPIP5K2-201ENST00000321521 15407 ntAPPRIS P3 TSL 5 BASIC4.56□□□□□ -1.68
MSH5O43196 WNK3-205ENST00000620763 5400 ntTSL 5 BASIC4.55□□□□□ -1.68
MSH5O43196 ADGRG4-203ENST00000394143 9931 ntAPPRIS P2 TSL 1 (best) BASIC4.55□□□□□ -1.68
MSH5O43196 SNORD28-201ENST00000384706 75 ntBASIC4.55□□□□□ -1.68
MSH5O43196 MT-TY-201ENST00000387409 66 ntBASIC4.55□□□□□ -1.68
MSH5O43196 AL021921.1-201ENST00000442774 93 ntBASIC4.55□□□□□ -1.68
MSH5O43196 MIR7153-201ENST00000637758 57 ntBASIC4.55□□□□□ -1.68
MSH5O43196 SLC39A10-202ENST00000409086 5432 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
MSH5O43196 MIR329-2-201ENST00000385029 84 ntBASIC4.54□□□□□ -1.68
MSH5O43196 MIR4635-201ENST00000583759 79 ntBASIC4.54□□□□□ -1.68
MSH5O43196 MUC19-205ENST00000454784 24775 ntTSL 5 BASIC4.54□□□□□ -1.68
MSH5O43196 AC062016.1-201ENST00000355719 319 ntBASIC4.53□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 254.8 ms