Protein–RNA interactions for Protein: Q9Y239

NOD1, Nucleotide-binding oligomerization domain-containing protein 1, humanhuman

Predictions only

Length 953 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NOD1Q9Y239 5S_rRNA.2-201ENST00000391293 112 ntBASIC2.45□□□□□ -2.02
NOD1Q9Y239 RNU6-402P-201ENST00000410678 103 ntBASIC2.45□□□□□ -2.02
NOD1Q9Y239 SPINT5P-201ENST00000448174 155 ntBASIC2.45□□□□□ -2.02
NOD1Q9Y239 RNU6-947P-201ENST00000516264 106 ntBASIC2.45□□□□□ -2.02
NOD1Q9Y239 RNU6-250P-201ENST00000516958 103 ntBASIC2.45□□□□□ -2.02
NOD1Q9Y239 AP000942.3-201ENST00000603702 160 ntBASIC2.45□□□□□ -2.02
NOD1Q9Y239 WWP1P1-201ENST00000466609 2769 ntBASIC2.45□□□□□ -2.02
NOD1Q9Y239 OXR1-209ENST00000517566 4501 ntTSL 1 (best) BASIC2.44□□□□□ -2.02
NOD1Q9Y239 Y_RNA.567-201ENST00000384736 106 ntBASIC2.44□□□□□ -2.02
NOD1Q9Y239 MIR1302-7-201ENST00000408841 72 ntBASIC2.44□□□□□ -2.02
NOD1Q9Y239 snoU13.2-201ENST00000459201 104 ntBASIC2.44□□□□□ -2.02
NOD1Q9Y239 AC022137.1-201ENST00000483735 151 ntBASIC2.44□□□□□ -2.02
NOD1Q9Y239 AC133485.1-201ENST00000567176 124 ntBASIC2.44□□□□□ -2.02
NOD1Q9Y239 AP001362.1-201ENST00000625165 124 ntBASIC2.44□□□□□ -2.02
NOD1Q9Y239 RNA5SP138-201ENST00000365098 114 ntBASIC2.43□□□□□ -2.02
NOD1Q9Y239 RNU6-396P-201ENST00000365369 105 ntBASIC2.43□□□□□ -2.02
NOD1Q9Y239 MIR17-201ENST00000385012 84 ntBASIC2.43□□□□□ -2.02
NOD1Q9Y239 TTTY16-201ENST00000437686 192 ntTSL 1 (best) BASIC2.43□□□□□ -2.02
NOD1Q9Y239 MIR4299-201ENST00000577899 72 ntBASIC2.43□□□□□ -2.02
NOD1Q9Y239 CERS6-AS1-202ENST00000594898 499 ntTSL 5 BASIC2.43□□□□□ -2.02
NOD1Q9Y239 SCN7A-206ENST00000619410 7186 ntAPPRIS P1 TSL 5 BASIC2.43□□□□□ -2.02
NOD1Q9Y239 SCN7A-207ENST00000621965 7186 ntAPPRIS P1 TSL 5 BASIC2.43□□□□□ -2.02
NOD1Q9Y239 Y_RNA.73-201ENST00000362910 113 ntBASIC2.42□□□□□ -2.02
NOD1Q9Y239 RNU6-949P-201ENST00000384040 107 ntBASIC2.42□□□□□ -2.02
NOD1Q9Y239 RNU6-675P-201ENST00000384236 104 ntBASIC2.42□□□□□ -2.02
NOD1Q9Y239 MIR588-201ENST00000384900 83 ntBASIC2.42□□□□□ -2.02
NOD1Q9Y239 COX7A2-206ENST00000472311 325 ntTSL 2 BASIC2.42□□□□□ -2.02
NOD1Q9Y239 MTND5P40-201ENST00000559945 246 ntBASIC2.42□□□□□ -2.02
NOD1Q9Y239 MIR8063-201ENST00000621930 81 ntBASIC2.42□□□□□ -2.02
NOD1Q9Y239 CGGBP1-202ENST00000398392 5298 ntAPPRIS P1 BASIC2.42□□□□□ -2.02
NOD1Q9Y239 ZBBX-205ENST00000455345 3185 ntAPPRIS ALT2 TSL 1 (best) BASIC2.41□□□□□ -2.02
NOD1Q9Y239 KIF20B-202ENST00000371728 6419 ntAPPRIS ALT2 TSL 1 (best) BASIC2.41□□□□□ -2.02
NOD1Q9Y239 TAB2-205ENST00000538427 4240 ntAPPRIS P1 TSL 5 BASIC2.41□□□□□ -2.02
NOD1Q9Y239 RNU6-1244P-201ENST00000363614 108 ntBASIC2.41□□□□□ -2.02
NOD1Q9Y239 Y_RNA.219-201ENST00000364232 113 ntBASIC2.41□□□□□ -2.02
NOD1Q9Y239 DEFA7P-201ENST00000382676 285 ntBASIC2.41□□□□□ -2.02
NOD1Q9Y239 RPL39P39-201ENST00000455840 151 ntBASIC2.41□□□□□ -2.02
NOD1Q9Y239 RNA5SP200-201ENST00000516360 103 ntBASIC2.41□□□□□ -2.02
NOD1Q9Y239 MIR3670-2-201ENST00000582974 65 ntBASIC2.41□□□□□ -2.02
NOD1Q9Y239 MIR3670-1-201ENST00000584160 65 ntBASIC2.41□□□□□ -2.02
NOD1Q9Y239 MIR3670-3-201ENST00000584855 65 ntBASIC2.41□□□□□ -2.02
NOD1Q9Y239 MIR3670-4-201ENST00000612260 65 ntBASIC2.41□□□□□ -2.02
NOD1Q9Y239 AC012676.2-201ENST00000619258 186 ntBASIC2.41□□□□□ -2.02
NOD1Q9Y239 PTPRQ-209ENST00000616559 8165 ntTSL 5 BASIC2.4□□□□□ -2.02
NOD1Q9Y239 RNU6-1275P-201ENST00000391087 107 ntBASIC2.4□□□□□ -2.03
NOD1Q9Y239 RNU6ATAC42P-201ENST00000408637 95 ntBASIC2.4□□□□□ -2.03
NOD1Q9Y239 snoU13.25-201ENST00000458945 104 ntBASIC2.4□□□□□ -2.03
NOD1Q9Y239 RNU1-98P-201ENST00000458992 160 ntBASIC2.4□□□□□ -2.03
NOD1Q9Y239 RNA5SP458-201ENST00000516188 119 ntBASIC2.4□□□□□ -2.03
NOD1Q9Y239 RNU6-267P-201ENST00000516714 103 ntBASIC2.4□□□□□ -2.03
NOD1Q9Y239 MIR4668-201ENST00000582284 70 ntBASIC2.4□□□□□ -2.03
NOD1Q9Y239 MIR6895-201ENST00000613497 78 ntBASIC2.4□□□□□ -2.03
NOD1Q9Y239 AP000753.3-201ENST00000604083 169 ntBASIC2.39□□□□□ -2.03
NOD1Q9Y239 PCDH11Y-203ENST00000362095 4220 ntAPPRIS ALT2 TSL 1 (best) BASIC2.39□□□□□ -2.03
NOD1Q9Y239 RNU6-219P-201ENST00000364728 107 ntBASIC2.38□□□□□ -2.03
NOD1Q9Y239 RNU6-242P-201ENST00000384359 107 ntBASIC2.38□□□□□ -2.03
NOD1Q9Y239 RNY1P4-201ENST00000384595 115 ntBASIC2.38□□□□□ -2.03
NOD1Q9Y239 SNORD78.1-201ENST00000390866 65 ntBASIC2.38□□□□□ -2.03
NOD1Q9Y239 RNU6-295P-201ENST00000516901 104 ntBASIC2.38□□□□□ -2.03
NOD1Q9Y239 MIR4264-201ENST00000583520 66 ntBASIC2.38□□□□□ -2.03
NOD1Q9Y239 MIR6740-201ENST00000618268 113 ntBASIC2.38□□□□□ -2.03
NOD1Q9Y239 TTK-202ENST00000369798 3010 ntAPPRIS P3 TSL 1 (best) BASIC2.37□□□□□ -2.03
NOD1Q9Y239 Y_RNA.173-201ENST00000363776 113 ntBASIC2.37□□□□□ -2.03
NOD1Q9Y239 RNU6-497P-201ENST00000365316 104 ntBASIC2.37□□□□□ -2.03
NOD1Q9Y239 MIR144-201ENST00000384886 86 ntBASIC2.37□□□□□ -2.03
NOD1Q9Y239 MIR563-201ENST00000385080 79 ntBASIC2.37□□□□□ -2.03
NOD1Q9Y239 Y_RNA.620-201ENST00000411009 88 ntBASIC2.37□□□□□ -2.03
NOD1Q9Y239 ATP6V0E1P3-201ENST00000420036 246 ntBASIC2.37□□□□□ -2.03
NOD1Q9Y239 HMGN2P23-201ENST00000456759 269 ntBASIC2.37□□□□□ -2.03
NOD1Q9Y239 RN7SL274P-201ENST00000492268 272 ntBASIC2.37□□□□□ -2.03
NOD1Q9Y239 MIR2115-201ENST00000516657 100 ntBASIC2.37□□□□□ -2.03
NOD1Q9Y239 OR2L2-202ENST00000641771 4300 ntAPPRIS P1 BASIC2.36□□□□□ -2.03
NOD1Q9Y239 RNY1P2-201ENST00000364820 117 ntBASIC2.36□□□□□ -2.03
NOD1Q9Y239 RNU6-205P-201ENST00000390858 107 ntBASIC2.36□□□□□ -2.03
NOD1Q9Y239 RNU6ATAC38P-201ENST00000408119 126 ntBASIC2.36□□□□□ -2.03
NOD1Q9Y239 snoU13.9-201ENST00000458927 103 ntBASIC2.36□□□□□ -2.03
NOD1Q9Y239 RPS29P11-201ENST00000496507 171 ntBASIC2.36□□□□□ -2.03
NOD1Q9Y239 AL133373.1-201ENST00000497098 94 ntBASIC2.36□□□□□ -2.03
NOD1Q9Y239 AC103810.8-201ENST00000607347 118 ntBASIC2.36□□□□□ -2.03
NOD1Q9Y239 TDRD15-202ENST00000622654 5805 ntAPPRIS P1 BASIC2.36□□□□□ -2.03
NOD1Q9Y239 RNU6-1276P-201ENST00000365372 104 ntBASIC2.35□□□□□ -2.03
NOD1Q9Y239 AC005908.1-201ENST00000468701 347 ntBASIC2.35□□□□□ -2.03
NOD1Q9Y239 RNU6ATAC9P-201ENST00000516210 116 ntBASIC2.35□□□□□ -2.03
NOD1Q9Y239 Y_RNA.685-201ENST00000516532 108 ntBASIC2.35□□□□□ -2.03
NOD1Q9Y239 SNORA4-201ENST00000584302 138 ntBASIC2.35□□□□□ -2.03
NOD1Q9Y239 ZDBF2-202ENST00000611847 9890 ntTSL 5 BASIC2.35□□□□□ -2.03
NOD1Q9Y239 PYGO1-201ENST00000302000 8488 ntTSL 1 (best) BASIC2.34□□□□□ -2.03
NOD1Q9Y239 AL596028.1-201ENST00000326971 197 ntBASIC2.34□□□□□ -2.03
NOD1Q9Y239 MT-TN-201ENST00000387400 73 ntBASIC2.34□□□□□ -2.03
NOD1Q9Y239 Y_RNA.609-201ENST00000410669 89 ntBASIC2.34□□□□□ -2.03
NOD1Q9Y239 AL603825.1-201ENST00000438481 80 ntBASIC2.34□□□□□ -2.03
NOD1Q9Y239 RNU7-62P-201ENST00000458856 62 ntBASIC2.34□□□□□ -2.03
NOD1Q9Y239 SNRPGP19-201ENST00000603826 189 ntBASIC2.34□□□□□ -2.03
NOD1Q9Y239 AL627230.6-201ENST00000611129 280 ntBASIC2.34□□□□□ -2.03
NOD1Q9Y239 MIR6516-201ENST00000630554 81 ntBASIC2.34□□□□□ -2.03
NOD1Q9Y239 HSBP1P2-201ENST00000299671 229 ntBASIC2.33□□□□□ -2.04
NOD1Q9Y239 MIR30D-201ENST00000362283 70 ntBASIC2.33□□□□□ -2.04
NOD1Q9Y239 RNU6-1125P-201ENST00000363601 107 ntBASIC2.33□□□□□ -2.04
NOD1Q9Y239 Y_RNA.168-201ENST00000363740 102 ntBASIC2.33□□□□□ -2.04
NOD1Q9Y239 RNU6-480P-201ENST00000384332 107 ntBASIC2.33□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 228.6 ms