Protein–RNA interactions for Protein: Q9P232

CNTN3, Contactin-3, humanhuman

Predictions only

Length 1,028 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTN3Q9P232 AP000553.5-201ENST00000641933 54 ntBASIC2.26□□□□□ -2.05
CNTN3Q9P232 OXR1-209ENST00000517566 4501 ntTSL 1 (best) BASIC2.25□□□□□ -2.05
CNTN3Q9P232 WWP1P1-201ENST00000466609 2769 ntBASIC2.25□□□□□ -2.05
CNTN3Q9P232 RNU6-439P-201ENST00000384188 106 ntBASIC2.25□□□□□ -2.05
CNTN3Q9P232 MIR30A-201ENST00000385092 71 ntBASIC2.25□□□□□ -2.05
CNTN3Q9P232 MIR548G-201ENST00000408442 89 ntBASIC2.25□□□□□ -2.05
CNTN3Q9P232 RNU6-250P-201ENST00000516958 103 ntBASIC2.25□□□□□ -2.05
CNTN3Q9P232 PRELID3BP2-201ENST00000605362 201 ntBASIC2.25□□□□□ -2.05
CNTN3Q9P232 RNU6-86P-201ENST00000606534 107 ntBASIC2.25□□□□□ -2.05
CNTN3Q9P232 SAMD9L-201ENST00000318238 7134 ntAPPRIS P1 TSL 1 (best) BASIC2.24□□□□□ -2.05
CNTN3Q9P232 RNU6-396P-201ENST00000365369 105 ntBASIC2.24□□□□□ -2.05
CNTN3Q9P232 RNU6-573P-201ENST00000383938 106 ntBASIC2.24□□□□□ -2.05
CNTN3Q9P232 snoU13.2-201ENST00000459201 104 ntBASIC2.24□□□□□ -2.05
CNTN3Q9P232 RPL23AP42-201ENST00000471152 471 ntBASIC2.24□□□□□ -2.05
CNTN3Q9P232 MIR3198-2-201ENST00000577868 80 ntBASIC2.24□□□□□ -2.05
CNTN3Q9P232 MIR3192-201ENST00000584920 77 ntBASIC2.24□□□□□ -2.05
CNTN3Q9P232 AL662814.1-201ENST00000617364 121 ntBASIC2.24□□□□□ -2.05
CNTN3Q9P232 AC105081.1-201ENST00000617727 106 ntBASIC2.24□□□□□ -2.05
CNTN3Q9P232 AP001362.1-201ENST00000625165 124 ntBASIC2.24□□□□□ -2.05
CNTN3Q9P232 Y_RNA.219-201ENST00000364232 113 ntBASIC2.23□□□□□ -2.05
CNTN3Q9P232 RNU6-675P-201ENST00000384236 104 ntBASIC2.23□□□□□ -2.05
CNTN3Q9P232 Y_RNA.567-201ENST00000384736 106 ntBASIC2.23□□□□□ -2.05
CNTN3Q9P232 MIR676-201ENST00000390702 67 ntBASIC2.23□□□□□ -2.05
CNTN3Q9P232 AC035139.1-201ENST00000423256 273 ntTSL 3 BASIC2.23□□□□□ -2.05
CNTN3Q9P232 AC244023.1-201ENST00000426884 112 ntBASIC2.23□□□□□ -2.05
CNTN3Q9P232 COX7A2-206ENST00000472311 325 ntTSL 2 BASIC2.23□□□□□ -2.05
CNTN3Q9P232 Y_RNA.685-201ENST00000516532 108 ntBASIC2.23□□□□□ -2.05
CNTN3Q9P232 AC133485.1-201ENST00000567176 124 ntBASIC2.23□□□□□ -2.05
CNTN3Q9P232 AC242498.1-201ENST00000604134 111 ntBASIC2.23□□□□□ -2.05
CNTN3Q9P232 FAM13A-AS1_1.1-201ENST00000612555 119 ntBASIC2.23□□□□□ -2.05
CNTN3Q9P232 RNU6-949P-201ENST00000384040 107 ntBASIC2.22□□□□□ -2.05
CNTN3Q9P232 RNA5SP489-201ENST00000410986 109 ntBASIC2.22□□□□□ -2.05
CNTN3Q9P232 HMGN2P38-201ENST00000423806 265 ntBASIC2.22□□□□□ -2.05
CNTN3Q9P232 RPL39P39-201ENST00000455840 151 ntBASIC2.22□□□□□ -2.05
CNTN3Q9P232 AC103810.7-201ENST00000607821 91 ntBASIC2.22□□□□□ -2.05
CNTN3Q9P232 AL096861.1-201ENST00000610899 123 ntBASIC2.22□□□□□ -2.05
CNTN3Q9P232 MIR1245B-201ENST00000636115 69 ntBASIC2.22□□□□□ -2.05
CNTN3Q9P232 PTPRQ-209ENST00000616559 8165 ntTSL 5 BASIC2.22□□□□□ -2.05
CNTN3Q9P232 AC008163.1-205ENST00000413944 4649 ntTSL 1 (best) BASIC2.21□□□□□ -2.06
CNTN3Q9P232 MIER3-204ENST00000381226 5210 ntAPPRIS ALT1 TSL 1 (best) BASIC2.21□□□□□ -2.06
CNTN3Q9P232 RNA5SP338-201ENST00000410495 85 ntBASIC2.21□□□□□ -2.06
CNTN3Q9P232 RNU6-592P-201ENST00000411333 103 ntBASIC2.21□□□□□ -2.06
CNTN3Q9P232 SPINT5P-201ENST00000448174 155 ntBASIC2.21□□□□□ -2.06
CNTN3Q9P232 SAGE1-201ENST00000324447 2952 ntAPPRIS P2 TSL 5 BASIC2.21□□□□□ -2.06
CNTN3Q9P232 LIFR-201ENST00000263409 10089 ntAPPRIS P1 TSL 1 (best) BASIC2.21□□□□□ -2.06
CNTN3Q9P232 RNA5SP37-201ENST00000365420 130 ntBASIC2.2□□□□□ -2.06
CNTN3Q9P232 RNU6-242P-201ENST00000384359 107 ntBASIC2.2□□□□□ -2.06
CNTN3Q9P232 MT-TN-201ENST00000387400 73 ntBASIC2.2□□□□□ -2.06
CNTN3Q9P232 AC027119.1-201ENST00000440877 241 ntBASIC2.2□□□□□ -2.06
CNTN3Q9P232 snoU13.9-201ENST00000458927 103 ntBASIC2.2□□□□□ -2.06
CNTN3Q9P232 AC090255.1-201ENST00000495779 349 ntBASIC2.2□□□□□ -2.06
CNTN3Q9P232 AL133373.1-201ENST00000497098 94 ntBASIC2.2□□□□□ -2.06
CNTN3Q9P232 RNU11-2P-201ENST00000516898 142 ntBASIC2.2□□□□□ -2.06
CNTN3Q9P232 MTND5P40-201ENST00000559945 246 ntBASIC2.2□□□□□ -2.06
CNTN3Q9P232 MIR4264-201ENST00000583520 66 ntBASIC2.2□□□□□ -2.06
CNTN3Q9P232 AP000942.3-201ENST00000603702 160 ntBASIC2.2□□□□□ -2.06
CNTN3Q9P232 AP000753.3-201ENST00000604083 169 ntBASIC2.2□□□□□ -2.06
CNTN3Q9P232 AC103810.8-201ENST00000607347 118 ntBASIC2.2□□□□□ -2.06
CNTN3Q9P232 ZBBX-205ENST00000455345 3185 ntAPPRIS ALT2 TSL 1 (best) BASIC2.19□□□□□ -2.06
CNTN3Q9P232 SNORD33-201ENST00000362761 85 ntBASIC2.19□□□□□ -2.06
CNTN3Q9P232 RNU6-1244P-201ENST00000363614 108 ntBASIC2.19□□□□□ -2.06
CNTN3Q9P232 Y_RNA.173-201ENST00000363776 113 ntBASIC2.19□□□□□ -2.06
CNTN3Q9P232 RNY1P2-201ENST00000364820 117 ntBASIC2.19□□□□□ -2.06
CNTN3Q9P232 RNA5SP138-201ENST00000365098 114 ntBASIC2.19□□□□□ -2.06
CNTN3Q9P232 MIR588-201ENST00000384900 83 ntBASIC2.19□□□□□ -2.06
CNTN3Q9P232 MIR1302-7-201ENST00000408841 72 ntBASIC2.19□□□□□ -2.06
CNTN3Q9P232 RNU6-402P-201ENST00000410678 103 ntBASIC2.19□□□□□ -2.06
CNTN3Q9P232 AC022137.1-201ENST00000483735 151 ntBASIC2.19□□□□□ -2.06
CNTN3Q9P232 RPS29P11-201ENST00000496507 171 ntBASIC2.19□□□□□ -2.06
CNTN3Q9P232 RNA5SP445-201ENST00000515889 115 ntBASIC2.19□□□□□ -2.06
CNTN3Q9P232 MIR2115-201ENST00000516657 100 ntBASIC2.19□□□□□ -2.06
CNTN3Q9P232 Y_RNA.783-201ENST00000613546 102 ntBASIC2.19□□□□□ -2.06
CNTN3Q9P232 MIR6715A-201ENST00000615929 79 ntBASIC2.19□□□□□ -2.06
CNTN3Q9P232 AL359851.1-201ENST00000569460 4997 ntBASIC2.19□□□□□ -2.06
CNTN3Q9P232 RNU6-1125P-201ENST00000363601 107 ntBASIC2.18□□□□□ -2.06
CNTN3Q9P232 RNU6-480P-201ENST00000384332 107 ntBASIC2.18□□□□□ -2.06
CNTN3Q9P232 MIR563-201ENST00000385080 79 ntBASIC2.18□□□□□ -2.06
CNTN3Q9P232 RNU6-1275P-201ENST00000391087 107 ntBASIC2.18□□□□□ -2.06
CNTN3Q9P232 RNU6ATAC38P-201ENST00000408119 126 ntBASIC2.18□□□□□ -2.06
CNTN3Q9P232 MIR1289-2-201ENST00000408360 111 ntBASIC2.18□□□□□ -2.06
CNTN3Q9P232 RNU6-717P-201ENST00000459076 104 ntBASIC2.18□□□□□ -2.06
CNTN3Q9P232 MIR4668-201ENST00000582284 70 ntBASIC2.18□□□□□ -2.06
CNTN3Q9P232 AC012676.2-201ENST00000619258 186 ntBASIC2.18□□□□□ -2.06
CNTN3Q9P232 CEP162-201ENST00000257766 5063 ntTSL 1 (best) BASIC2.18□□□□□ -2.06
CNTN3Q9P232 SI-201ENST00000264382 6011 ntAPPRIS P1 TSL 1 (best) BASIC2.18□□□□□ -2.06
CNTN3Q9P232 SNORD78.1-201ENST00000390866 65 ntBASIC2.17□□□□□ -2.06
CNTN3Q9P232 RN7SL274P-201ENST00000492268 272 ntBASIC2.17□□□□□ -2.06
CNTN3Q9P232 AC104984.5-201ENST00000586878 94 ntBASIC2.17□□□□□ -2.06
CNTN3Q9P232 CERS6-AS1-202ENST00000594898 499 ntTSL 5 BASIC2.17□□□□□ -2.06
CNTN3Q9P232 SEPT14P17-201ENST00000617978 177 ntBASIC2.17□□□□□ -2.06
CNTN3Q9P232 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC2.17□□□□□ -2.06
CNTN3Q9P232 KPNA5-202ENST00000368564 11311 ntAPPRIS P1 TSL 1 (best) BASIC2.17□□□□□ -2.06
CNTN3Q9P232 LRRCC1-202ENST00000414626 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC2.17□□□□□ -2.06
CNTN3Q9P232 HSBP1P2-201ENST00000299671 229 ntBASIC2.16□□□□□ -2.06
CNTN3Q9P232 MIR504-201ENST00000385065 83 ntBASIC2.16□□□□□ -2.06
CNTN3Q9P232 RNU6ATAC42P-201ENST00000408637 95 ntBASIC2.16□□□□□ -2.06
CNTN3Q9P232 Y_RNA.620-201ENST00000411009 88 ntBASIC2.16□□□□□ -2.06
CNTN3Q9P232 RNU1-98P-201ENST00000458992 160 ntBASIC2.16□□□□□ -2.06
CNTN3Q9P232 AC008834.1-201ENST00000511612 175 ntBASIC2.16□□□□□ -2.06
CNTN3Q9P232 RNU6-947P-201ENST00000516264 106 ntBASIC2.16□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 177.8 ms