Protein–RNA interactions for Protein: Q9NZU5

LMCD1, LIM and cysteine-rich domains protein 1, humanhuman

Predictions only

Length 365 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMCD1Q9NZU5 RNU6-411P-201ENST00000384451 107 ntBASIC2.37□□□□□ -2.03
LMCD1Q9NZU5 Y_RNA.532-201ENST00000384590 113 ntBASIC2.37□□□□□ -2.03
LMCD1Q9NZU5 RNU6-950P-201ENST00000384651 107 ntBASIC2.37□□□□□ -2.03
LMCD1Q9NZU5 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC2.37□□□□□ -2.03
LMCD1Q9NZU5 RNU4-37P-201ENST00000410214 84 ntBASIC2.37□□□□□ -2.03
LMCD1Q9NZU5 MALAT1-207ENST00000613376 132 ntTSL 3 BASIC2.37□□□□□ -2.03
LMCD1Q9NZU5 MIR6132-201ENST00000622083 109 ntBASIC2.37□□□□□ -2.03
LMCD1Q9NZU5 AC011124.2-201ENST00000518739 3222 ntTSL 1 (best) BASIC2.36□□□□□ -2.03
LMCD1Q9NZU5 Y_RNA.205-201ENST00000364128 113 ntBASIC2.36□□□□□ -2.03
LMCD1Q9NZU5 SNORA67.3-201ENST00000384366 140 ntBASIC2.36□□□□□ -2.03
LMCD1Q9NZU5 HMGN1P33-201ENST00000432945 451 ntBASIC2.36□□□□□ -2.03
LMCD1Q9NZU5 RPS29P28-201ENST00000446439 141 ntBASIC2.36□□□□□ -2.03
LMCD1Q9NZU5 SNORD123-201ENST00000459473 70 ntBASIC2.36□□□□□ -2.03
LMCD1Q9NZU5 COX7A2-206ENST00000472311 325 ntTSL 2 BASIC2.36□□□□□ -2.03
LMCD1Q9NZU5 RPS27P21-201ENST00000486977 252 ntBASIC2.36□□□□□ -2.03
LMCD1Q9NZU5 SCARNA16.3-201ENST00000516595 184 ntBASIC2.36□□□□□ -2.03
LMCD1Q9NZU5 RNU6-557P-201ENST00000516842 110 ntBASIC2.36□□□□□ -2.03
LMCD1Q9NZU5 DNAJC19P9-201ENST00000555084 351 ntBASIC2.36□□□□□ -2.03
LMCD1Q9NZU5 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC2.36□□□□□ -2.03
LMCD1Q9NZU5 SCN7A-201ENST00000409855 7183 ntAPPRIS P1 TSL 1 (best) BASIC2.35□□□□□ -2.03
LMCD1Q9NZU5 RNA5SP261-201ENST00000410536 106 ntBASIC2.35□□□□□ -2.03
LMCD1Q9NZU5 RNA5SP182-201ENST00000516064 82 ntBASIC2.35□□□□□ -2.03
LMCD1Q9NZU5 MIR4781-201ENST00000585250 76 ntBASIC2.35□□□□□ -2.03
LMCD1Q9NZU5 AL020996.3-201ENST00000606617 222 ntBASIC2.35□□□□□ -2.03
LMCD1Q9NZU5 OR5M1-202ENST00000641076 4302 ntAPPRIS P1 BASIC2.34□□□□□ -2.03
LMCD1Q9NZU5 GABRA2-209ENST00000510861 3411 ntAPPRIS P1 TSL 5 BASIC2.34□□□□□ -2.03
LMCD1Q9NZU5 RNA5SP133-201ENST00000363368 119 ntBASIC2.34□□□□□ -2.03
LMCD1Q9NZU5 MIR181B2-201ENST00000385004 89 ntBASIC2.34□□□□□ -2.03
LMCD1Q9NZU5 RNU6-871P-201ENST00000516122 100 ntBASIC2.34□□□□□ -2.03
LMCD1Q9NZU5 RNA5SP437-201ENST00000517249 129 ntBASIC2.34□□□□□ -2.03
LMCD1Q9NZU5 FAM106DP-201ENST00000586416 501 ntBASIC2.34□□□□□ -2.03
LMCD1Q9NZU5 MIR6766-201ENST00000622641 72 ntBASIC2.34□□□□□ -2.03
LMCD1Q9NZU5 CLLU1-201ENST00000378485 3897 ntAPPRIS P1 TSL 1 (best) BASIC2.34□□□□□ -2.03
LMCD1Q9NZU5 XIRP2-201ENST00000295237 5246 ntTSL 2 BASIC2.34□□□□□ -2.04
LMCD1Q9NZU5 ZDBF2-202ENST00000611847 9890 ntTSL 5 BASIC2.33□□□□□ -2.04
LMCD1Q9NZU5 SNORA24-201ENST00000384096 131 ntBASIC2.33□□□□□ -2.04
LMCD1Q9NZU5 RNU6-342P-201ENST00000384521 104 ntBASIC2.33□□□□□ -2.04
LMCD1Q9NZU5 MIR526A1-201ENST00000384897 85 ntBASIC2.33□□□□□ -2.04
LMCD1Q9NZU5 AC019129.1-201ENST00000403786 261 ntBASIC2.33□□□□□ -2.04
LMCD1Q9NZU5 AL023284.1-201ENST00000403956 276 ntBASIC2.33□□□□□ -2.04
LMCD1Q9NZU5 MIR1236-201ENST00000408340 102 ntBASIC2.33□□□□□ -2.04
LMCD1Q9NZU5 RNU6-634P-201ENST00000459134 106 ntBASIC2.33□□□□□ -2.04
LMCD1Q9NZU5 RNU6-687P-201ENST00000516443 89 ntBASIC2.33□□□□□ -2.04
LMCD1Q9NZU5 RNU6-90P-201ENST00000606352 106 ntBASIC2.33□□□□□ -2.04
LMCD1Q9NZU5 AC021506.2-201ENST00000612354 169 ntBASIC2.33□□□□□ -2.04
LMCD1Q9NZU5 MIR6845-201ENST00000613182 61 ntBASIC2.33□□□□□ -2.04
LMCD1Q9NZU5 AC008163.1-202ENST00000636004 2889 ntBASIC2.33□□□□□ -2.04
LMCD1Q9NZU5 SNORA2B-201ENST00000384583 137 ntBASIC2.32□□□□□ -2.04
LMCD1Q9NZU5 MIR520A-201ENST00000384862 85 ntBASIC2.32□□□□□ -2.04
LMCD1Q9NZU5 SNORA48.3-201ENST00000391081 134 ntBASIC2.32□□□□□ -2.04
LMCD1Q9NZU5 MIR1283-2-201ENST00000408621 87 ntBASIC2.32□□□□□ -2.04
LMCD1Q9NZU5 RNU6-519P-201ENST00000410590 108 ntBASIC2.32□□□□□ -2.04
LMCD1Q9NZU5 RNU7-73P-201ENST00000458743 63 ntBASIC2.32□□□□□ -2.04
LMCD1Q9NZU5 RNU7-35P-201ENST00000517174 62 ntBASIC2.32□□□□□ -2.04
LMCD1Q9NZU5 SNORD3E-202ENST00000627253 216 ntBASIC2.32□□□□□ -2.04
LMCD1Q9NZU5 SNORA63.2-201ENST00000362603 126 ntBASIC2.31□□□□□ -2.04
LMCD1Q9NZU5 RNU6-686P-201ENST00000364839 107 ntBASIC2.31□□□□□ -2.04
LMCD1Q9NZU5 Y_RNA.448-201ENST00000384185 108 ntBASIC2.31□□□□□ -2.04
LMCD1Q9NZU5 MIR583-201ENST00000384846 75 ntBASIC2.31□□□□□ -2.04
LMCD1Q9NZU5 RNA5SP465-201ENST00000391195 109 ntBASIC2.31□□□□□ -2.04
LMCD1Q9NZU5 MTND4LP19-201ENST00000403051 166 ntBASIC2.31□□□□□ -2.04
LMCD1Q9NZU5 AC245047.7-201ENST00000440265 293 ntBASIC2.31□□□□□ -2.04
LMCD1Q9NZU5 SNORD4B-201ENST00000459083 72 ntBASIC2.31□□□□□ -2.04
LMCD1Q9NZU5 AL035078.1-202ENST00000531627 413 ntTSL 2 BASIC2.31□□□□□ -2.04
LMCD1Q9NZU5 MIR4709-201ENST00000577272 72 ntBASIC2.31□□□□□ -2.04
LMCD1Q9NZU5 PNRC2-204ENST00000579103 171 ntTSL 2 BASIC2.31□□□□□ -2.04
LMCD1Q9NZU5 snoU13.31-201ENST00000607291 104 ntBASIC2.31□□□□□ -2.04
LMCD1Q9NZU5 USP53-202ENST00000450251 6072 ntAPPRIS P1 TSL 5 BASIC2.31□□□□□ -2.04
LMCD1Q9NZU5 MIR518A2-201ENST00000384966 87 ntBASIC2.3□□□□□ -2.04
LMCD1Q9NZU5 RNU6-1321P-201ENST00000390905 107 ntBASIC2.3□□□□□ -2.04
LMCD1Q9NZU5 RNA5SP338-201ENST00000410495 85 ntBASIC2.3□□□□□ -2.04
LMCD1Q9NZU5 AC073127.1-201ENST00000447336 333 ntTSL 3 BASIC2.3□□□□□ -2.04
LMCD1Q9NZU5 SPINT5P-201ENST00000448174 155 ntBASIC2.3□□□□□ -2.04
LMCD1Q9NZU5 SNORD67.1-201ENST00000516618 108 ntBASIC2.3□□□□□ -2.04
LMCD1Q9NZU5 RNU6-448P-201ENST00000517052 107 ntBASIC2.3□□□□□ -2.04
LMCD1Q9NZU5 AC012676.2-201ENST00000619258 186 ntBASIC2.3□□□□□ -2.04
LMCD1Q9NZU5 PLD1-217ENST00000627725 174 ntTSL 5 BASIC2.3□□□□□ -2.04
LMCD1Q9NZU5 MIER3-204ENST00000381226 5210 ntAPPRIS ALT1 TSL 1 (best) BASIC2.3□□□□□ -2.04
LMCD1Q9NZU5 LRRCC1-202ENST00000414626 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC2.3□□□□□ -2.04
LMCD1Q9NZU5 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC2.29□□□□□ -2.04
LMCD1Q9NZU5 MIR337-201ENST00000362281 93 ntBASIC2.29□□□□□ -2.04
LMCD1Q9NZU5 MIR660-201ENST00000385235 97 ntBASIC2.29□□□□□ -2.04
LMCD1Q9NZU5 HMGN2P39-201ENST00000398005 273 ntBASIC2.29□□□□□ -2.04
LMCD1Q9NZU5 RNU6ATAC38P-201ENST00000408119 126 ntBASIC2.29□□□□□ -2.04
LMCD1Q9NZU5 RNA5SP270-201ENST00000411361 118 ntBASIC2.29□□□□□ -2.04
LMCD1Q9NZU5 AC108667.1-201ENST00000428618 249 ntBASIC2.29□□□□□ -2.04
LMCD1Q9NZU5 RNU6ATAC9P-201ENST00000516210 116 ntBASIC2.29□□□□□ -2.04
LMCD1Q9NZU5 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC2.29□□□□□ -2.04
LMCD1Q9NZU5 Y_RNA.168-201ENST00000363740 102 ntBASIC2.28□□□□□ -2.04
LMCD1Q9NZU5 RNU6-865P-201ENST00000364772 107 ntBASIC2.28□□□□□ -2.04
LMCD1Q9NZU5 RNU6-1067P-201ENST00000384752 107 ntBASIC2.28□□□□□ -2.04
LMCD1Q9NZU5 RNU2-59P-201ENST00000410482 191 ntBASIC2.28□□□□□ -2.04
LMCD1Q9NZU5 RNA5SP501-201ENST00000410990 112 ntBASIC2.28□□□□□ -2.04
LMCD1Q9NZU5 RPL23AP6-201ENST00000446637 472 ntBASIC2.28□□□□□ -2.04
LMCD1Q9NZU5 snoU13.11-201ENST00000459219 104 ntBASIC2.28□□□□□ -2.04
LMCD1Q9NZU5 SUB1P4-201ENST00000566062 339 ntBASIC2.28□□□□□ -2.04
LMCD1Q9NZU5 ZNRD1-AS1_1.6-201ENST00000610339 68 ntBASIC2.28□□□□□ -2.04
LMCD1Q9NZU5 RNU6-112P-201ENST00000363599 104 ntBASIC2.27□□□□□ -2.05
LMCD1Q9NZU5 RNU6-480P-201ENST00000384332 107 ntBASIC2.27□□□□□ -2.05
LMCD1Q9NZU5 Y_RNA.508-201ENST00000384502 114 ntBASIC2.27□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 231.3 ms