Protein–RNA interactions for Protein: Q9NQI0

DDX4, Probable ATP-dependent RNA helicase DDX4, humanhuman

Known RBP Predictions only

Length 724 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX4Q9NQI0 AC138907.4-201ENST00000570107 226 ntBASIC0.94□□□□□ -2.26
DDX4Q9NQI0 MIR6740-201ENST00000618268 113 ntBASIC0.94□□□□□ -2.26
DDX4Q9NQI0 AP001340.1-201ENST00000624405 217 ntBASIC0.94□□□□□ -2.26
DDX4Q9NQI0 SNORD114-26-201ENST00000363543 72 ntBASIC0.93□□□□□ -2.26
DDX4Q9NQI0 RNU6-915P-201ENST00000364943 103 ntBASIC0.93□□□□□ -2.26
DDX4Q9NQI0 SNORD12C-201ENST00000386307 89 ntBASIC0.93□□□□□ -2.26
DDX4Q9NQI0 MIR1827-201ENST00000408549 66 ntBASIC0.93□□□□□ -2.26
DDX4Q9NQI0 RNA5SP237-201ENST00000410414 113 ntBASIC0.93□□□□□ -2.26
DDX4Q9NQI0 RNU6-351P-201ENST00000516097 100 ntBASIC0.93□□□□□ -2.26
DDX4Q9NQI0 AP001328.1-201ENST00000528550 176 ntBASIC0.93□□□□□ -2.26
DDX4Q9NQI0 AC025627.3-201ENST00000582078 182 ntBASIC0.93□□□□□ -2.26
DDX4Q9NQI0 MIR1-1-201ENST00000362147 71 ntBASIC0.92□□□□□ -2.26
DDX4Q9NQI0 RNY1P11-201ENST00000363759 113 ntBASIC0.92□□□□□ -2.26
DDX4Q9NQI0 RNU6-934P-201ENST00000365154 107 ntBASIC0.92□□□□□ -2.26
DDX4Q9NQI0 Y_RNA.343-201ENST00000365354 112 ntBASIC0.92□□□□□ -2.26
DDX4Q9NQI0 RNU6-342P-201ENST00000384521 104 ntBASIC0.92□□□□□ -2.26
DDX4Q9NQI0 MIR569-201ENST00000385228 96 ntBASIC0.92□□□□□ -2.26
DDX4Q9NQI0 Y_RNA.686-201ENST00000516548 134 ntBASIC0.92□□□□□ -2.26
DDX4Q9NQI0 Y_RNA.757-201ENST00000578934 114 ntBASIC0.92□□□□□ -2.26
DDX4Q9NQI0 MIR4305-201ENST00000583252 102 ntBASIC0.92□□□□□ -2.26
DDX4Q9NQI0 HOTAIRM1_4.1-201ENST00000617934 102 ntBASIC0.92□□□□□ -2.26
DDX4Q9NQI0 LEKR1-212ENST00000640869 237 ntTSL 5 BASIC0.92□□□□□ -2.26
DDX4Q9NQI0 SNORD114-2-201ENST00000363953 78 ntBASIC0.91□□□□□ -2.26
DDX4Q9NQI0 Y_RNA.420-201ENST00000384043 110 ntBASIC0.91□□□□□ -2.26
DDX4Q9NQI0 RNU6-460P-201ENST00000391158 108 ntBASIC0.91□□□□□ -2.26
DDX4Q9NQI0 RNU7-113P-201ENST00000459273 62 ntBASIC0.91□□□□□ -2.26
DDX4Q9NQI0 Y_RNA.651-201ENST00000459380 103 ntBASIC0.91□□□□□ -2.26
DDX4Q9NQI0 AC113410.1-201ENST00000505029 247 ntBASIC0.91□□□□□ -2.26
DDX4Q9NQI0 RNU6-240P-201ENST00000516098 97 ntBASIC0.91□□□□□ -2.26
DDX4Q9NQI0 RNA5SP255-201ENST00000516370 107 ntBASIC0.91□□□□□ -2.26
DDX4Q9NQI0 AC021443.1-201ENST00000604478 211 ntBASIC0.91□□□□□ -2.26
DDX4Q9NQI0 AL662814.1-201ENST00000617364 121 ntBASIC0.91□□□□□ -2.26
DDX4Q9NQI0 AC010332.2-201ENST00000613083 1904 ntBASIC0.9□□□□□ -2.27
DDX4Q9NQI0 RNU6-309P-201ENST00000364573 106 ntBASIC0.9□□□□□ -2.27
DDX4Q9NQI0 RNU6-1187P-201ENST00000364771 110 ntBASIC0.9□□□□□ -2.27
DDX4Q9NQI0 MIR100-201ENST00000385259 80 ntBASIC0.9□□□□□ -2.27
DDX4Q9NQI0 RNU6ATAC6P-201ENST00000408132 126 ntBASIC0.9□□□□□ -2.27
DDX4Q9NQI0 RPS26P5-201ENST00000418544 335 ntBASIC0.9□□□□□ -2.27
DDX4Q9NQI0 AC092071.1-201ENST00000597260 549 ntTSL 5 BASIC0.9□□□□□ -2.27
DDX4Q9NQI0 U7.2-201ENST00000607576 63 ntBASIC0.9□□□□□ -2.27
DDX4Q9NQI0 SNORD115-2-201ENST00000362842 82 ntBASIC0.89□□□□□ -2.27
DDX4Q9NQI0 SNORD115-20-201ENST00000365099 82 ntBASIC0.89□□□□□ -2.27
DDX4Q9NQI0 RPL39P25-201ENST00000449384 154 ntBASIC0.89□□□□□ -2.27
DDX4Q9NQI0 PSMC1P5-201ENST00000512850 177 ntBASIC0.89□□□□□ -2.27
DDX4Q9NQI0 RNU6-255P-201ENST00000516957 105 ntBASIC0.89□□□□□ -2.27
DDX4Q9NQI0 IGHVII-40-1-201ENST00000517316 58 ntBASIC0.89□□□□□ -2.27
DDX4Q9NQI0 AC108866.1-201ENST00000503073 2339 ntTSL 5 BASIC0.88□□□□□ -2.27
DDX4Q9NQI0 MIR30D-201ENST00000362283 70 ntBASIC0.88□□□□□ -2.27
DDX4Q9NQI0 RNU1-36P-201ENST00000365130 165 ntBASIC0.88□□□□□ -2.27
DDX4Q9NQI0 SNORA18-201ENST00000384416 132 ntBASIC0.88□□□□□ -2.27
DDX4Q9NQI0 MT-TR-201ENST00000387439 65 ntBASIC0.88□□□□□ -2.27
DDX4Q9NQI0 SNORD89-201ENST00000390981 114 ntBASIC0.88□□□□□ -2.27
DDX4Q9NQI0 MIR1257-201ENST00000408490 117 ntBASIC0.88□□□□□ -2.27
DDX4Q9NQI0 RNU6-1086P-201ENST00000410930 100 ntBASIC0.88□□□□□ -2.27
DDX4Q9NQI0 SNORD83.1-201ENST00000411362 77 ntBASIC0.88□□□□□ -2.27
DDX4Q9NQI0 RNU7-164P-201ENST00000459221 62 ntBASIC0.88□□□□□ -2.27
DDX4Q9NQI0 MIR4771-2-201ENST00000577758 74 ntBASIC0.88□□□□□ -2.27
DDX4Q9NQI0 MIR3121-201ENST00000579680 77 ntBASIC0.88□□□□□ -2.27
DDX4Q9NQI0 MIR4771-1-201ENST00000582617 74 ntBASIC0.88□□□□□ -2.27
DDX4Q9NQI0 MIR6835-201ENST00000621552 64 ntBASIC0.88□□□□□ -2.27
DDX4Q9NQI0 RNU6-647P-201ENST00000364243 107 ntBASIC0.87□□□□□ -2.27
DDX4Q9NQI0 Y_RNA.299-201ENST00000364973 94 ntBASIC0.87□□□□□ -2.27
DDX4Q9NQI0 RNU6-1062P-201ENST00000383908 107 ntBASIC0.87□□□□□ -2.27
DDX4Q9NQI0 Y_RNA.506-201ENST00000384494 102 ntBASIC0.87□□□□□ -2.27
DDX4Q9NQI0 Y_RNA.531-201ENST00000384589 121 ntBASIC0.87□□□□□ -2.27
DDX4Q9NQI0 MIR508-201ENST00000384857 115 ntBASIC0.87□□□□□ -2.27
DDX4Q9NQI0 snoU13.21-201ENST00000459368 105 ntBASIC0.87□□□□□ -2.27
DDX4Q9NQI0 RPL39P28-201ENST00000465655 155 ntBASIC0.87□□□□□ -2.27
DDX4Q9NQI0 RNU5E-3P-201ENST00000515913 68 ntBASIC0.87□□□□□ -2.27
DDX4Q9NQI0 uc_338.6-201ENST00000613544 171 ntBASIC0.87□□□□□ -2.27
DDX4Q9NQI0 AL137067.1-201ENST00000615933 120 ntBASIC0.87□□□□□ -2.27
DDX4Q9NQI0 Y_RNA.171-201ENST00000363760 102 ntBASIC0.86□□□□□ -2.27
DDX4Q9NQI0 AC012668.1-201ENST00000457625 228 ntTSL 3 BASIC0.86□□□□□ -2.27
DDX4Q9NQI0 RNU6-977P-201ENST00000516411 103 ntBASIC0.86□□□□□ -2.27
DDX4Q9NQI0 RNU6-426P-201ENST00000516464 97 ntBASIC0.86□□□□□ -2.27
DDX4Q9NQI0 RNA5SP33-201ENST00000516687 98 ntBASIC0.86□□□□□ -2.27
DDX4Q9NQI0 AC004812.1-201ENST00000540773 146 ntBASIC0.86□□□□□ -2.27
DDX4Q9NQI0 AC133485.1-201ENST00000567176 124 ntBASIC0.86□□□□□ -2.27
DDX4Q9NQI0 AC141846.1-201ENST00000568348 142 ntBASIC0.86□□□□□ -2.27
DDX4Q9NQI0 AC138907.6-201ENST00000568401 126 ntBASIC0.86□□□□□ -2.27
DDX4Q9NQI0 TUG1_4.1-201ENST00000619464 181 ntBASIC0.86□□□□□ -2.27
DDX4Q9NQI0 OMD-201ENST00000375550 2449 ntAPPRIS P1 TSL 1 (best) BASIC0.86□□□□□ -2.27
DDX4Q9NQI0 Y_RNA.298-201ENST00000364960 107 ntBASIC0.85□□□□□ -2.27
DDX4Q9NQI0 Y_RNA.366-201ENST00000365540 102 ntBASIC0.85□□□□□ -2.27
DDX4Q9NQI0 RNU6-1237P-201ENST00000384777 107 ntBASIC0.85□□□□□ -2.27
DDX4Q9NQI0 RNU7-185P-201ENST00000459215 60 ntBASIC0.85□□□□□ -2.27
DDX4Q9NQI0 RNU7-123P-201ENST00000515911 60 ntBASIC0.85□□□□□ -2.27
DDX4Q9NQI0 RNU2-35P-201ENST00000516446 142 ntBASIC0.85□□□□□ -2.27
DDX4Q9NQI0 RNU6-1258P-201ENST00000516911 111 ntBASIC0.85□□□□□ -2.27
DDX4Q9NQI0 MIR6779-201ENST00000617283 64 ntBASIC0.85□□□□□ -2.27
DDX4Q9NQI0 AC023934.1-201ENST00000574529 2389 ntBASIC0.85□□□□□ -2.27
DDX4Q9NQI0 RNU6-369P-201ENST00000362515 102 ntBASIC0.84□□□□□ -2.27
DDX4Q9NQI0 RNU6-949P-201ENST00000384040 107 ntBASIC0.84□□□□□ -2.27
DDX4Q9NQI0 Y_RNA.568-201ENST00000384742 113 ntBASIC0.84□□□□□ -2.27
DDX4Q9NQI0 SNORD105-201ENST00000386910 85 ntBASIC0.84□□□□□ -2.27
DDX4Q9NQI0 SNORA40-201ENST00000388090 126 ntBASIC0.84□□□□□ -2.27
DDX4Q9NQI0 MIR938-201ENST00000401216 83 ntBASIC0.84□□□□□ -2.27
DDX4Q9NQI0 AL606490.4-201ENST00000423117 127 ntBASIC0.84□□□□□ -2.27
DDX4Q9NQI0 Y_RNA.703-201ENST00000516846 111 ntBASIC0.84□□□□□ -2.27
DDX4Q9NQI0 RNU7-35P-201ENST00000517174 62 ntBASIC0.84□□□□□ -2.27
Retrieved 100 of 98,524 protein–RNA pairs in 103.6 ms