Protein–RNA interactions for Protein: Q96LD4

TRIM47, Tripartite motif-containing protein 47, humanhuman

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47Q96LD4 MAP4K3-205ENST00000437545 3924 ntTSL 5 BASIC2.96□□□□□ -1.94
TRIM47Q96LD4 ZNF470-202ENST00000391709 6601 ntAPPRIS P1 TSL 5 BASIC2.96□□□□□ -1.94
TRIM47Q96LD4 RNU6-571P-201ENST00000384128 107 ntBASIC2.95□□□□□ -1.94
TRIM47Q96LD4 RNU2-7P-201ENST00000410794 178 ntBASIC2.95□□□□□ -1.94
TRIM47Q96LD4 BX276092.1-201ENST00000427368 251 ntBASIC2.95□□□□□ -1.94
TRIM47Q96LD4 AL162400.2-201ENST00000427547 157 ntTSL 3 BASIC2.95□□□□□ -1.94
TRIM47Q96LD4 snoU13.17-201ENST00000458802 104 ntBASIC2.95□□□□□ -1.94
TRIM47Q96LD4 AC141846.1-201ENST00000568348 142 ntBASIC2.95□□□□□ -1.94
TRIM47Q96LD4 AL627230.6-201ENST00000611129 280 ntBASIC2.95□□□□□ -1.94
TRIM47Q96LD4 NEBL-202ENST00000377122 9216 ntTSL 1 (best) BASIC2.95□□□□□ -1.94
TRIM47Q96LD4 LIG4-203ENST00000442234 3982 ntAPPRIS P1 TSL 1 (best) BASIC2.95□□□□□ -1.94
TRIM47Q96LD4 MAP3K2-203ENST00000409947 10992 ntAPPRIS P1 TSL 1 (best) BASIC2.95□□□□□ -1.94
TRIM47Q96LD4 AGL-204ENST00000370161 6923 ntTSL 5 BASIC2.94□□□□□ -1.94
TRIM47Q96LD4 SNORD36A-201ENST00000362874 73 ntBASIC2.94□□□□□ -1.94
TRIM47Q96LD4 RNU6-291P-201ENST00000384720 107 ntBASIC2.94□□□□□ -1.94
TRIM47Q96LD4 RNA5SP210-201ENST00000391034 120 ntBASIC2.94□□□□□ -1.94
TRIM47Q96LD4 AC078980.1-201ENST00000485384 262 ntTSL 2 BASIC2.94□□□□□ -1.94
TRIM47Q96LD4 MIR3169-201ENST00000578032 83 ntBASIC2.94□□□□□ -1.94
TRIM47Q96LD4 TSGA10-205ENST00000410001 3036 ntAPPRIS P2 TSL 1 (best) BASIC2.93□□□□□ -1.94
TRIM47Q96LD4 TAB2-201ENST00000367456 4553 ntAPPRIS P1 TSL 5 BASIC2.93□□□□□ -1.94
TRIM47Q96LD4 PRKD3-201ENST00000234179 5900 ntAPPRIS P1 TSL 1 (best) BASIC2.93□□□□□ -1.94
TRIM47Q96LD4 RNA5SP99-201ENST00000364020 114 ntBASIC2.93□□□□□ -1.94
TRIM47Q96LD4 RNU6-1019P-201ENST00000364424 107 ntBASIC2.93□□□□□ -1.94
TRIM47Q96LD4 MIR526A1-201ENST00000384897 85 ntBASIC2.93□□□□□ -1.94
TRIM47Q96LD4 RNA5SP237-201ENST00000410414 113 ntBASIC2.93□□□□□ -1.94
TRIM47Q96LD4 HMGN2P3-201ENST00000433603 273 ntBASIC2.93□□□□□ -1.94
TRIM47Q96LD4 HMGN2P5-201ENST00000436882 273 ntBASIC2.93□□□□□ -1.94
TRIM47Q96LD4 VTRNA2-2P-201ENST00000516091 103 ntBASIC2.93□□□□□ -1.94
TRIM47Q96LD4 RNU6-881P-201ENST00000516813 102 ntBASIC2.93□□□□□ -1.94
TRIM47Q96LD4 AC138749.4-201ENST00000563970 127 ntBASIC2.93□□□□□ -1.94
TRIM47Q96LD4 AC022513.1-201ENST00000624512 117 ntBASIC2.93□□□□□ -1.94
TRIM47Q96LD4 ZBBX-205ENST00000455345 3185 ntAPPRIS ALT2 TSL 1 (best) BASIC2.92□□□□□ -1.94
TRIM47Q96LD4 MACC1-202ENST00000400331 9159 ntAPPRIS P1 TSL 2 BASIC2.92□□□□□ -1.94
TRIM47Q96LD4 RNU6-23P-201ENST00000363283 107 ntBASIC2.92□□□□□ -1.94
TRIM47Q96LD4 SNORA25B-201ENST00000365507 128 ntBASIC2.92□□□□□ -1.94
TRIM47Q96LD4 Y_RNA.371-201ENST00000365591 113 ntBASIC2.92□□□□□ -1.94
TRIM47Q96LD4 AC092427.1-202ENST00000430569 476 ntBASIC2.92□□□□□ -1.94
TRIM47Q96LD4 AC023141.11-201ENST00000508864 202 ntBASIC2.92□□□□□ -1.94
TRIM47Q96LD4 OXR1-215ENST00000531443 3599 ntTSL 5 BASIC2.91□□□□□ -1.94
TRIM47Q96LD4 RNU6-340P-201ENST00000364005 107 ntBASIC2.91□□□□□ -1.94
TRIM47Q96LD4 MIR516A2-201ENST00000384888 90 ntBASIC2.91□□□□□ -1.94
TRIM47Q96LD4 MIR516A1-201ENST00000385033 90 ntBASIC2.91□□□□□ -1.94
TRIM47Q96LD4 RNU6-243P-201ENST00000391140 107 ntBASIC2.91□□□□□ -1.94
TRIM47Q96LD4 RNU6-466P-201ENST00000391224 103 ntBASIC2.91□□□□□ -1.94
TRIM47Q96LD4 RNU6-1254P-201ENST00000391266 104 ntBASIC2.91□□□□□ -1.94
TRIM47Q96LD4 SLC8A1-AS1-230ENST00000627538 212 ntTSL 5 BASIC2.91□□□□□ -1.94
TRIM47Q96LD4 KCNIP4-IT1-201ENST00000627566 9848 ntBASIC2.9□□□□□ -1.94
TRIM47Q96LD4 WWP1P1-201ENST00000466609 2769 ntBASIC2.9□□□□□ -1.94
TRIM47Q96LD4 RNU6-461P-201ENST00000364195 107 ntBASIC2.9□□□□□ -1.95
TRIM47Q96LD4 Y_RNA.236-201ENST00000364427 111 ntBASIC2.9□□□□□ -1.95
TRIM47Q96LD4 MIR518E-201ENST00000385252 88 ntBASIC2.9□□□□□ -1.95
TRIM47Q96LD4 AC074131.1-201ENST00000514662 253 ntTSL 2 BASIC2.9□□□□□ -1.95
TRIM47Q96LD4 AC022784.2-201ENST00000521298 328 ntTSL 2 BASIC2.9□□□□□ -1.95
TRIM47Q96LD4 MIR1273D-201ENST00000577266 86 ntBASIC2.9□□□□□ -1.95
TRIM47Q96LD4 MIR3675-201ENST00000583661 73 ntBASIC2.9□□□□□ -1.95
TRIM47Q96LD4 CERS6-AS1-202ENST00000594898 499 ntTSL 5 BASIC2.9□□□□□ -1.95
TRIM47Q96LD4 HMHB1-202ENST00000638299 126 ntAPPRIS P2 TSL 1 (best) BASIC2.9□□□□□ -1.95
TRIM47Q96LD4 ERBIN-202ENST00000380935 6692 ntTSL 5 BASIC2.9□□□□□ -1.95
TRIM47Q96LD4 DENND4A-202ENST00000443035 8665 ntTSL 1 (best) BASIC2.89□□□□□ -1.95
TRIM47Q96LD4 RNU6-829P-201ENST00000363700 112 ntBASIC2.89□□□□□ -1.95
TRIM47Q96LD4 SNORD116-24-201ENST00000384549 92 ntBASIC2.89□□□□□ -1.95
TRIM47Q96LD4 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC2.89□□□□□ -1.95
TRIM47Q96LD4 RNA5SP247-201ENST00000411181 105 ntBASIC2.89□□□□□ -1.95
TRIM47Q96LD4 AC008781.2-201ENST00000502205 2480 ntTSL 1 (best) BASIC2.89□□□□□ -1.95
TRIM47Q96LD4 AL662814.1-201ENST00000617364 121 ntBASIC2.89□□□□□ -1.95
TRIM47Q96LD4 U6.109-201ENST00000636749 87 ntBASIC2.89□□□□□ -1.95
TRIM47Q96LD4 FAR1-204ENST00000532502 5820 ntTSL 2 BASIC2.89□□□□□ -1.95
TRIM47Q96LD4 PIK3CA-201ENST00000263967 9093 ntAPPRIS P1 TSL 2 BASIC2.89□□□□□ -1.95
TRIM47Q96LD4 CACNB4-228ENST00000636598 7808 ntTSL 5 BASIC2.88□□□□□ -1.95
TRIM47Q96LD4 ZMYM2-203ENST00000382874 10139 ntAPPRIS P1 TSL 1 (best) BASIC2.88□□□□□ -1.95
TRIM47Q96LD4 Y_RNA.42-201ENST00000362660 108 ntBASIC2.88□□□□□ -1.95
TRIM47Q96LD4 SNORD114-1-201ENST00000362705 72 ntBASIC2.88□□□□□ -1.95
TRIM47Q96LD4 RNU6-949P-201ENST00000384040 107 ntBASIC2.88□□□□□ -1.95
TRIM47Q96LD4 RNU6-950P-201ENST00000384651 107 ntBASIC2.88□□□□□ -1.95
TRIM47Q96LD4 TRAJ26-201ENST00000390511 60 ntAPPRIS P1 BASIC2.88□□□□□ -1.95
TRIM47Q96LD4 5S_rRNA.2-201ENST00000391293 112 ntBASIC2.88□□□□□ -1.95
TRIM47Q96LD4 GHRL-208ENST00000439975 326 ntTSL 1 (best) BASIC2.88□□□□□ -1.95
TRIM47Q96LD4 MIR3616-201ENST00000584070 92 ntBASIC2.88□□□□□ -1.95
TRIM47Q96LD4 AL353997.5-201ENST00000618886 171 ntBASIC2.88□□□□□ -1.95
TRIM47Q96LD4 TXLNGY-201ENST00000253320 7299 ntTSL 2 BASIC2.88□□□□□ -1.95
TRIM47Q96LD4 ANGPTL3-201ENST00000371129 2805 ntAPPRIS P1 TSL 1 (best) BASIC2.87□□□□□ -1.95
TRIM47Q96LD4 RNU6-1216P-201ENST00000362590 107 ntBASIC2.87□□□□□ -1.95
TRIM47Q96LD4 SNORD115-3-201ENST00000363100 82 ntBASIC2.87□□□□□ -1.95
TRIM47Q96LD4 Y_RNA.207-201ENST00000364142 106 ntBASIC2.87□□□□□ -1.95
TRIM47Q96LD4 SNORD115-22-201ENST00000364456 82 ntBASIC2.87□□□□□ -1.95
TRIM47Q96LD4 RNU6-1031P-201ENST00000384773 107 ntBASIC2.87□□□□□ -1.95
TRIM47Q96LD4 AL359511.1-201ENST00000402970 211 ntBASIC2.87□□□□□ -1.95
TRIM47Q96LD4 MIR2113-201ENST00000459007 91 ntBASIC2.87□□□□□ -1.95
TRIM47Q96LD4 RNA5SP458-201ENST00000516188 119 ntBASIC2.87□□□□□ -1.95
TRIM47Q96LD4 MIR4764-201ENST00000580680 88 ntBASIC2.87□□□□□ -1.95
TRIM47Q96LD4 MIR8053-201ENST00000613344 75 ntBASIC2.87□□□□□ -1.95
TRIM47Q96LD4 AC008133.2-201ENST00000624540 351 ntBASIC2.87□□□□□ -1.95
TRIM47Q96LD4 PCM1-222ENST00000524226 5955 ntTSL 1 (best) BASIC2.87□□□□□ -1.95
TRIM47Q96LD4 SNORD45.1-201ENST00000363181 77 ntBASIC2.86□□□□□ -1.95
TRIM47Q96LD4 RNU6-1051P-201ENST00000365471 102 ntBASIC2.86□□□□□ -1.95
TRIM47Q96LD4 SNORD38B-201ENST00000384690 67 ntBASIC2.86□□□□□ -1.95
TRIM47Q96LD4 AC019129.1-201ENST00000403786 261 ntBASIC2.86□□□□□ -1.95
TRIM47Q96LD4 SNORA74.3-201ENST00000517108 154 ntBASIC2.86□□□□□ -1.95
TRIM47Q96LD4 SNORD38B-202ENST00000625943 69 ntBASIC2.86□□□□□ -1.95
TRIM47Q96LD4 WARS-244ENST00000627608 123 ntTSL 5 BASIC2.86□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 147.3 ms