Protein–RNA interactions for Protein: Q96JQ5

MS4A4A, Membrane-spanning 4-domains subfamily A member 4A, humanhuman

Predictions only

Length 239 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MS4A4AQ96JQ5 VTRNA2-2P-201ENST00000516091 103 ntBASIC3.22□□□□□ -1.89
MS4A4AQ96JQ5 RNU6-531P-201ENST00000516694 104 ntBASIC3.22□□□□□ -1.89
MS4A4AQ96JQ5 MIR4769-201ENST00000584126 77 ntBASIC3.22□□□□□ -1.89
MS4A4AQ96JQ5 VPS35-212ENST00000640313 141 ntTSL 5 BASIC3.22□□□□□ -1.89
MS4A4AQ96JQ5 RNU6-203P-201ENST00000384038 104 ntBASIC3.21□□□□□ -1.9
MS4A4AQ96JQ5 MIR194-1-201ENST00000384892 85 ntBASIC3.21□□□□□ -1.9
MS4A4AQ96JQ5 MIR504-201ENST00000385065 83 ntBASIC3.21□□□□□ -1.9
MS4A4AQ96JQ5 RNU6-205P-201ENST00000390858 107 ntBASIC3.21□□□□□ -1.9
MS4A4AQ96JQ5 UBBP3-201ENST00000445497 241 ntBASIC3.21□□□□□ -1.9
MS4A4AQ96JQ5 snoU13.15-201ENST00000459407 104 ntBASIC3.21□□□□□ -1.9
MS4A4AQ96JQ5 RPL30P7-201ENST00000479312 323 ntBASIC3.21□□□□□ -1.9
MS4A4AQ96JQ5 AC024382.1-201ENST00000520224 292 ntTSL 3 BASIC3.21□□□□□ -1.9
MS4A4AQ96JQ5 MIR548H5-201ENST00000580314 60 ntBASIC3.21□□□□□ -1.9
MS4A4AQ96JQ5 AP000942.3-201ENST00000603702 160 ntBASIC3.21□□□□□ -1.9
MS4A4AQ96JQ5 AC005520.4-201ENST00000604337 90 ntBASIC3.21□□□□□ -1.9
MS4A4AQ96JQ5 HELZ-201ENST00000358691 13810 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
MS4A4AQ96JQ5 MIR101-2-201ENST00000362195 79 ntBASIC3.2□□□□□ -1.9
MS4A4AQ96JQ5 Y_RNA.207-201ENST00000364142 106 ntBASIC3.2□□□□□ -1.9
MS4A4AQ96JQ5 RNA5SP259-201ENST00000365541 109 ntBASIC3.2□□□□□ -1.9
MS4A4AQ96JQ5 RNU6-291P-201ENST00000384720 107 ntBASIC3.2□□□□□ -1.9
MS4A4AQ96JQ5 MIR519A1-201ENST00000385257 85 ntBASIC3.2□□□□□ -1.9
MS4A4AQ96JQ5 THOC2-201ENST00000245838 5609 ntAPPRIS P1 TSL 5 BASIC3.19□□□□□ -1.9
MS4A4AQ96JQ5 ZNF658B-202ENST00000615961 3375 ntBASIC3.19□□□□□ -1.9
MS4A4AQ96JQ5 Y_RNA.371-201ENST00000365591 113 ntBASIC3.19□□□□□ -1.9
MS4A4AQ96JQ5 RN7SL633P-201ENST00000488974 297 ntBASIC3.19□□□□□ -1.9
MS4A4AQ96JQ5 MIR4491-201ENST00000581087 68 ntBASIC3.19□□□□□ -1.9
MS4A4AQ96JQ5 MIR4524B-201ENST00000581569 115 ntBASIC3.19□□□□□ -1.9
MS4A4AQ96JQ5 MIR3675-201ENST00000583661 73 ntBASIC3.19□□□□□ -1.9
MS4A4AQ96JQ5 MIR8053-201ENST00000613344 75 ntBASIC3.19□□□□□ -1.9
MS4A4AQ96JQ5 ERBIN-204ENST00000380943 6410 ntAPPRIS P3 TSL 1 (best) BASIC3.19□□□□□ -1.9
MS4A4AQ96JQ5 DOPEY1-203ENST00000369739 7743 ntAPPRIS ALT1 TSL 1 (best) BASIC3.19□□□□□ -1.9
MS4A4AQ96JQ5 VNN1-201ENST00000367928 3106 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
MS4A4AQ96JQ5 MIR377-201ENST00000362145 69 ntBASIC3.18□□□□□ -1.9
MS4A4AQ96JQ5 SNORA25.4-201ENST00000363666 124 ntBASIC3.18□□□□□ -1.9
MS4A4AQ96JQ5 MIR513A1-201ENST00000385138 129 ntBASIC3.18□□□□□ -1.9
MS4A4AQ96JQ5 SNORD90-201ENST00000391145 111 ntBASIC3.18□□□□□ -1.9
MS4A4AQ96JQ5 AL159169.1-201ENST00000421119 127 ntBASIC3.18□□□□□ -1.9
MS4A4AQ96JQ5 snoU13.17-201ENST00000458802 104 ntBASIC3.18□□□□□ -1.9
MS4A4AQ96JQ5 AC078980.1-201ENST00000485384 262 ntTSL 2 BASIC3.18□□□□□ -1.9
MS4A4AQ96JQ5 RN7SL274P-201ENST00000492268 272 ntBASIC3.18□□□□□ -1.9
MS4A4AQ96JQ5 SNORA9.3-201ENST00000516383 129 ntBASIC3.18□□□□□ -1.9
MS4A4AQ96JQ5 POSTN-209ENST00000541179 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC3.17□□□□□ -1.9
MS4A4AQ96JQ5 CC2D2B-210ENST00000636965 3247 ntTSL 5 BASIC3.17□□□□□ -1.9
MS4A4AQ96JQ5 RNU6ATAC3P-201ENST00000387974 126 ntBASIC3.17□□□□□ -1.9
MS4A4AQ96JQ5 RNU6-630P-201ENST00000391258 106 ntBASIC3.17□□□□□ -1.9
MS4A4AQ96JQ5 SNORD93-201ENST00000408813 74 ntBASIC3.17□□□□□ -1.9
MS4A4AQ96JQ5 MIR1302-7-201ENST00000408841 72 ntBASIC3.17□□□□□ -1.9
MS4A4AQ96JQ5 RNU7-170P-201ENST00000459303 61 ntBASIC3.17□□□□□ -1.9
MS4A4AQ96JQ5 RN7SL330P-201ENST00000469709 307 ntBASIC3.17□□□□□ -1.9
MS4A4AQ96JQ5 RNU11-2P-201ENST00000516898 142 ntBASIC3.17□□□□□ -1.9
MS4A4AQ96JQ5 AC009487.2-201ENST00000420969 6821 ntBASIC3.17□□□□□ -1.9
MS4A4AQ96JQ5 CCDC168-201ENST00000322527 21466 ntAPPRIS P1 TSL 3 BASIC3.17□□□□□ -1.9
MS4A4AQ96JQ5 U8.2-201ENST00000363156 134 ntBASIC3.16□□□□□ -1.9
MS4A4AQ96JQ5 RNU6-499P-201ENST00000365615 107 ntBASIC3.16□□□□□ -1.9
MS4A4AQ96JQ5 MIR18B-201ENST00000454574 71 ntBASIC3.16□□□□□ -1.9
MS4A4AQ96JQ5 MIR3192-201ENST00000584920 77 ntBASIC3.16□□□□□ -1.9
MS4A4AQ96JQ5 TRDV1-202ENST00000621643 102 ntBASIC3.16□□□□□ -1.9
MS4A4AQ96JQ5 ZBTB37-201ENST00000367701 19128 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
MS4A4AQ96JQ5 SNORD56.5-201ENST00000364281 72 ntBASIC3.15□□□□□ -1.91
MS4A4AQ96JQ5 Y_RNA.536-201ENST00000384621 113 ntBASIC3.15□□□□□ -1.91
MS4A4AQ96JQ5 SNORD41-201ENST00000386967 70 ntBASIC3.15□□□□□ -1.91
MS4A4AQ96JQ5 SNORD100-201ENST00000408573 76 ntBASIC3.15□□□□□ -1.91
MS4A4AQ96JQ5 Y_RNA.606-201ENST00000410579 103 ntBASIC3.15□□□□□ -1.91
MS4A4AQ96JQ5 SNORA25.16-201ENST00000516741 121 ntBASIC3.15□□□□□ -1.91
MS4A4AQ96JQ5 AC099850.3-201ENST00000577678 321 ntTSL 3 BASIC3.15□□□□□ -1.91
MS4A4AQ96JQ5 NEDD4-208ENST00000508342 7235 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
MS4A4AQ96JQ5 RNU6-330P-201ENST00000363015 107 ntBASIC3.14□□□□□ -1.91
MS4A4AQ96JQ5 Y_RNA.809-201ENST00000516058 95 ntBASIC3.14□□□□□ -1.91
MS4A4AQ96JQ5 RNU6-922P-201ENST00000516753 99 ntBASIC3.14□□□□□ -1.91
MS4A4AQ96JQ5 MIR4529-201ENST00000578110 78 ntBASIC3.14□□□□□ -1.91
MS4A4AQ96JQ5 ZNFX1-AS1_2.1-201ENST00000610973 93 ntBASIC3.14□□□□□ -1.91
MS4A4AQ96JQ5 CENPE-201ENST00000265148 8612 ntAPPRIS P1 TSL 2 BASIC3.14□□□□□ -1.91
MS4A4AQ96JQ5 LUZP2-208ENST00000620308 4981 ntTSL 5 BASIC3.14□□□□□ -1.91
MS4A4AQ96JQ5 KIAA1109-203ENST00000388738 15574 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
MS4A4AQ96JQ5 SYNE1-212ENST00000423061 27436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.14□□□□□ -1.91
MS4A4AQ96JQ5 RNA5SP289-201ENST00000362332 137 ntBASIC3.13□□□□□ -1.91
MS4A4AQ96JQ5 RNU6-1260P-201ENST00000362944 107 ntBASIC3.13□□□□□ -1.91
MS4A4AQ96JQ5 SNORD56.3-201ENST00000363507 71 ntBASIC3.13□□□□□ -1.91
MS4A4AQ96JQ5 SNORD101-201ENST00000384027 73 ntBASIC3.13□□□□□ -1.91
MS4A4AQ96JQ5 MIR512-1-201ENST00000384913 84 ntBASIC3.13□□□□□ -1.91
MS4A4AQ96JQ5 MIR514B-201ENST00000516774 80 ntBASIC3.13□□□□□ -1.91
MS4A4AQ96JQ5 U4.3-201ENST00000621047 82 ntBASIC3.13□□□□□ -1.91
MS4A4AQ96JQ5 TAB2-201ENST00000367456 4553 ntAPPRIS P1 TSL 5 BASIC3.12□□□□□ -1.91
MS4A4AQ96JQ5 Y_RNA.443-201ENST00000384135 111 ntBASIC3.12□□□□□ -1.91
MS4A4AQ96JQ5 Y_RNA.588-201ENST00000391254 102 ntBASIC3.12□□□□□ -1.91
MS4A4AQ96JQ5 RNU6ATAC37P-201ENST00000408328 131 ntBASIC3.12□□□□□ -1.91
MS4A4AQ96JQ5 RNA5SP293-201ENST00000410527 113 ntBASIC3.12□□□□□ -1.91
MS4A4AQ96JQ5 RNU7-195P-201ENST00000458793 62 ntBASIC3.12□□□□□ -1.91
MS4A4AQ96JQ5 AC097510.1-201ENST00000510945 133 ntBASIC3.12□□□□□ -1.91
MS4A4AQ96JQ5 RNA5SP282-201ENST00000516355 108 ntBASIC3.12□□□□□ -1.91
MS4A4AQ96JQ5 SNORA64.4-201ENST00000516632 81 ntBASIC3.12□□□□□ -1.91
MS4A4AQ96JQ5 GHRLOS.1-201ENST00000610995 70 ntBASIC3.12□□□□□ -1.91
MS4A4AQ96JQ5 KNL1-202ENST00000399668 7607 ntAPPRIS ALT2 TSL 1 (best) BASIC3.11□□□□□ -1.91
MS4A4AQ96JQ5 FGF7-201ENST00000267843 5467 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
MS4A4AQ96JQ5 RNU6-664P-201ENST00000362381 107 ntBASIC3.11□□□□□ -1.91
MS4A4AQ96JQ5 RNU6-403P-201ENST00000363163 104 ntBASIC3.11□□□□□ -1.91
MS4A4AQ96JQ5 RNA5SP450-201ENST00000411206 102 ntBASIC3.11□□□□□ -1.91
MS4A4AQ96JQ5 LINC00393-201ENST00000443621 282 ntTSL 3 BASIC3.11□□□□□ -1.91
MS4A4AQ96JQ5 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
MS4A4AQ96JQ5 TFEC-201ENST00000265440 6628 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 153.6 ms