Protein–RNA interactions for Protein: Q96FT9

IFT43, Intraflagellar transport protein 43 homolog, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFT43Q96FT9 Y_RNA.609-201ENST00000410669 89 ntBASIC2.39□□□□□ -2.03
IFT43Q96FT9 FAM13A-AS1_1.1-201ENST00000612555 119 ntBASIC2.39□□□□□ -2.03
IFT43Q96FT9 AC012676.2-201ENST00000619258 186 ntBASIC2.39□□□□□ -2.03
IFT43Q96FT9 MIR548BB-201ENST00000626714 66 ntBASIC2.39□□□□□ -2.03
IFT43Q96FT9 AC006160.2-201ENST00000637708 154 ntBASIC2.39□□□□□ -2.03
IFT43Q96FT9 NEDD1-204ENST00000457368 3162 ntTSL 2 BASIC2.39□□□□□ -2.03
IFT43Q96FT9 RNU6-1125P-201ENST00000363601 107 ntBASIC2.38□□□□□ -2.03
IFT43Q96FT9 Y_RNA.244-201ENST00000364484 109 ntBASIC2.38□□□□□ -2.03
IFT43Q96FT9 RNU6-480P-201ENST00000384332 107 ntBASIC2.38□□□□□ -2.03
IFT43Q96FT9 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC2.38□□□□□ -2.03
IFT43Q96FT9 RNU6ATAC37P-201ENST00000408328 131 ntBASIC2.38□□□□□ -2.03
IFT43Q96FT9 RNU6-922P-201ENST00000516753 99 ntBASIC2.38□□□□□ -2.03
IFT43Q96FT9 AC141846.1-201ENST00000568348 142 ntBASIC2.38□□□□□ -2.03
IFT43Q96FT9 MIR1273D-201ENST00000577266 86 ntBASIC2.38□□□□□ -2.03
IFT43Q96FT9 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC2.38□□□□□ -2.03
IFT43Q96FT9 Y_RNA.191-201ENST00000363972 113 ntBASIC2.37□□□□□ -2.03
IFT43Q96FT9 Y_RNA.607-201ENST00000410597 98 ntBASIC2.37□□□□□ -2.03
IFT43Q96FT9 AL365434.1-201ENST00000412362 380 ntTSL 3 BASIC2.37□□□□□ -2.03
IFT43Q96FT9 AC244636.1-201ENST00000421152 228 ntBASIC2.37□□□□□ -2.03
IFT43Q96FT9 HMGN2P38-201ENST00000423806 265 ntBASIC2.37□□□□□ -2.03
IFT43Q96FT9 AL161932.1-201ENST00000437408 146 ntBASIC2.37□□□□□ -2.03
IFT43Q96FT9 AC133485.1-201ENST00000567176 124 ntBASIC2.37□□□□□ -2.03
IFT43Q96FT9 MIR4648-201ENST00000580107 72 ntBASIC2.37□□□□□ -2.03
IFT43Q96FT9 AL357312.1-201ENST00000603879 298 ntBASIC2.37□□□□□ -2.03
IFT43Q96FT9 AC046143.2-201ENST00000609789 160 ntBASIC2.37□□□□□ -2.03
IFT43Q96FT9 SNORA16B-201ENST00000364674 135 ntBASIC2.36□□□□□ -2.03
IFT43Q96FT9 RN7SKP223-201ENST00000410582 62 ntBASIC2.36□□□□□ -2.03
IFT43Q96FT9 AC090255.1-201ENST00000495779 349 ntBASIC2.36□□□□□ -2.03
IFT43Q96FT9 AC015688.6-201ENST00000577737 104 ntBASIC2.36□□□□□ -2.03
IFT43Q96FT9 SNORA77B-201ENST00000578179 125 ntBASIC2.36□□□□□ -2.03
IFT43Q96FT9 MIR3192-201ENST00000584920 77 ntBASIC2.36□□□□□ -2.03
IFT43Q96FT9 PRELID3BP2-201ENST00000605362 201 ntBASIC2.36□□□□□ -2.03
IFT43Q96FT9 AL662814.1-201ENST00000617364 121 ntBASIC2.36□□□□□ -2.03
IFT43Q96FT9 TTK-202ENST00000369798 3010 ntAPPRIS P3 TSL 1 (best) BASIC2.36□□□□□ -2.03
IFT43Q96FT9 THOC2-216ENST00000491737 4452 ntTSL 5 BASIC2.35□□□□□ -2.03
IFT43Q96FT9 snoU13.15-201ENST00000459407 104 ntBASIC2.35□□□□□ -2.03
IFT43Q96FT9 snoU13.26-201ENST00000459452 105 ntBASIC2.35□□□□□ -2.03
IFT43Q96FT9 RNA5SP445-201ENST00000515889 115 ntBASIC2.35□□□□□ -2.03
IFT43Q96FT9 RNU6-857P-201ENST00000515893 110 ntBASIC2.35□□□□□ -2.03
IFT43Q96FT9 RNU6-24P-201ENST00000384440 107 ntBASIC2.34□□□□□ -2.03
IFT43Q96FT9 MIR181B2-201ENST00000385004 89 ntBASIC2.34□□□□□ -2.03
IFT43Q96FT9 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC2.34□□□□□ -2.03
IFT43Q96FT9 AC244023.1-201ENST00000426884 112 ntBASIC2.34□□□□□ -2.03
IFT43Q96FT9 AC027119.1-201ENST00000440877 241 ntBASIC2.34□□□□□ -2.03
IFT43Q96FT9 RPS29P11-201ENST00000496507 171 ntBASIC2.34□□□□□ -2.03
IFT43Q96FT9 AL513043.2-201ENST00000573941 143 ntBASIC2.34□□□□□ -2.03
IFT43Q96FT9 MIR5007-201ENST00000583098 95 ntBASIC2.34□□□□□ -2.03
IFT43Q96FT9 AC242498.1-201ENST00000604134 111 ntBASIC2.34□□□□□ -2.03
IFT43Q96FT9 MIR6840-201ENST00000611937 71 ntBASIC2.34□□□□□ -2.03
IFT43Q96FT9 ZDBF2-202ENST00000611847 9890 ntTSL 5 BASIC2.33□□□□□ -2.04
IFT43Q96FT9 HSBP1P2-201ENST00000299671 229 ntBASIC2.33□□□□□ -2.04
IFT43Q96FT9 RNY1P2-201ENST00000364820 117 ntBASIC2.33□□□□□ -2.04
IFT43Q96FT9 RNU6-949P-201ENST00000384040 107 ntBASIC2.33□□□□□ -2.04
IFT43Q96FT9 RNA5SP338-201ENST00000410495 85 ntBASIC2.33□□□□□ -2.04
IFT43Q96FT9 AL096861.1-201ENST00000610899 123 ntBASIC2.33□□□□□ -2.04
IFT43Q96FT9 GHRLOS.1-201ENST00000610995 70 ntBASIC2.33□□□□□ -2.04
IFT43Q96FT9 RNU6-613P-201ENST00000410412 108 ntBASIC2.32□□□□□ -2.04
IFT43Q96FT9 AC035139.1-201ENST00000423256 273 ntTSL 3 BASIC2.32□□□□□ -2.04
IFT43Q96FT9 HSPE1P24-201ENST00000450782 238 ntBASIC2.32□□□□□ -2.04
IFT43Q96FT9 snoU13.2-201ENST00000459201 104 ntBASIC2.32□□□□□ -2.04
IFT43Q96FT9 AC104435.1-201ENST00000483483 166 ntBASIC2.32□□□□□ -2.04
IFT43Q96FT9 RNU6ATAC9P-201ENST00000516210 116 ntBASIC2.32□□□□□ -2.04
IFT43Q96FT9 MIR4713-201ENST00000582691 75 ntBASIC2.32□□□□□ -2.04
IFT43Q96FT9 MIR4448-201ENST00000584360 86 ntBASIC2.32□□□□□ -2.04
IFT43Q96FT9 AP000753.3-201ENST00000604083 169 ntBASIC2.32□□□□□ -2.04
IFT43Q96FT9 MIR8074-201ENST00000615081 81 ntBASIC2.32□□□□□ -2.04
IFT43Q96FT9 OXR1-209ENST00000517566 4501 ntTSL 1 (best) BASIC2.32□□□□□ -2.04
IFT43Q96FT9 WWP1P1-201ENST00000466609 2769 ntBASIC2.32□□□□□ -2.04
IFT43Q96FT9 RNU6-652P-201ENST00000365488 107 ntBASIC2.31□□□□□ -2.04
IFT43Q96FT9 SNORA2B-201ENST00000384583 137 ntBASIC2.31□□□□□ -2.04
IFT43Q96FT9 MIR504-201ENST00000385065 83 ntBASIC2.31□□□□□ -2.04
IFT43Q96FT9 RNU6-250P-201ENST00000516958 103 ntBASIC2.31□□□□□ -2.04
IFT43Q96FT9 AL078612.1-201ENST00000533009 150 ntTSL 5 BASIC2.31□□□□□ -2.04
IFT43Q96FT9 MIR4287-201ENST00000579398 78 ntBASIC2.31□□□□□ -2.04
IFT43Q96FT9 AP000942.3-201ENST00000603702 160 ntBASIC2.31□□□□□ -2.04
IFT43Q96FT9 MIR6766-201ENST00000622641 72 ntBASIC2.31□□□□□ -2.04
IFT43Q96FT9 ATP13A3-201ENST00000256031 7322 ntAPPRIS P1 TSL 5 BASIC2.3□□□□□ -2.04
IFT43Q96FT9 TAB2-205ENST00000538427 4240 ntAPPRIS P1 TSL 5 BASIC2.3□□□□□ -2.04
IFT43Q96FT9 MIRLET7G-201ENST00000362280 84 ntBASIC2.3□□□□□ -2.04
IFT43Q96FT9 RNU6-396P-201ENST00000365369 105 ntBASIC2.3□□□□□ -2.04
IFT43Q96FT9 MIR1302-7-201ENST00000408841 72 ntBASIC2.3□□□□□ -2.04
IFT43Q96FT9 AL162400.2-201ENST00000427547 157 ntTSL 3 BASIC2.3□□□□□ -2.04
IFT43Q96FT9 GHRL-208ENST00000439975 326 ntTSL 1 (best) BASIC2.3□□□□□ -2.04
IFT43Q96FT9 AC019288.1-201ENST00000557918 224 ntBASIC2.3□□□□□ -2.04
IFT43Q96FT9 KPNA5-202ENST00000368564 11311 ntAPPRIS P1 TSL 1 (best) BASIC2.3□□□□□ -2.04
IFT43Q96FT9 PTPRQ-209ENST00000616559 8165 ntTSL 5 BASIC2.29□□□□□ -2.04
IFT43Q96FT9 Y_RNA.168-201ENST00000363740 102 ntBASIC2.29□□□□□ -2.04
IFT43Q96FT9 Y_RNA.221-201ENST00000364248 96 ntBASIC2.29□□□□□ -2.04
IFT43Q96FT9 MIR588-201ENST00000384900 83 ntBASIC2.29□□□□□ -2.04
IFT43Q96FT9 MIR519C-201ENST00000385053 87 ntBASIC2.29□□□□□ -2.04
IFT43Q96FT9 RNU6-1296P-201ENST00000383879 107 ntBASIC2.28□□□□□ -2.04
IFT43Q96FT9 RNU6ATAC42P-201ENST00000408637 95 ntBASIC2.28□□□□□ -2.04
IFT43Q96FT9 RNU6-947P-201ENST00000516264 106 ntBASIC2.28□□□□□ -2.04
IFT43Q96FT9 CERS6-AS1-202ENST00000594898 499 ntTSL 5 BASIC2.28□□□□□ -2.04
IFT43Q96FT9 CYP19A1-220ENST00000613097 123 ntTSL 5 BASIC2.28□□□□□ -2.04
IFT43Q96FT9 MIR8066-201ENST00000617280 78 ntBASIC2.28□□□□□ -2.04
IFT43Q96FT9 HS1BP3-208ENST00000631166 78 ntTSL 5 BASIC2.28□□□□□ -2.04
IFT43Q96FT9 OR2L2-202ENST00000641771 4300 ntAPPRIS P1 BASIC2.28□□□□□ -2.04
IFT43Q96FT9 KIF20B-202ENST00000371728 6419 ntAPPRIS ALT2 TSL 1 (best) BASIC2.28□□□□□ -2.05
IFT43Q96FT9 PCDH11Y-203ENST00000362095 4220 ntAPPRIS ALT2 TSL 1 (best) BASIC2.27□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 258.6 ms