Protein–RNA interactions for Protein: Q8TBC3

SHKBP1, SH3KBP1-binding protein 1, humanhuman

Predictions only

Length 707 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1Q8TBC3 MYSM1-208ENST00000622766 6020 ntTSL 1 (best) BASIC2.32□□□□□ -2.04
SHKBP1Q8TBC3 RNU4-32P-201ENST00000363404 141 ntBASIC2.31□□□□□ -2.04
SHKBP1Q8TBC3 AL023284.1-201ENST00000403956 276 ntBASIC2.31□□□□□ -2.04
SHKBP1Q8TBC3 SUMO1P4-201ENST00000429430 302 ntBASIC2.31□□□□□ -2.04
SHKBP1Q8TBC3 snoU13.23-201ENST00000458863 104 ntBASIC2.31□□□□□ -2.04
SHKBP1Q8TBC3 RNU6-917P-201ENST00000516294 104 ntBASIC2.31□□□□□ -2.04
SHKBP1Q8TBC3 MIR8066-201ENST00000617280 78 ntBASIC2.31□□□□□ -2.04
SHKBP1Q8TBC3 SAMD9L-201ENST00000318238 7134 ntAPPRIS P1 TSL 1 (best) BASIC2.31□□□□□ -2.04
SHKBP1Q8TBC3 KNL1-204ENST00000527044 5404 ntTSL 5 BASIC2.31□□□□□ -2.04
SHKBP1Q8TBC3 EYS-211ENST00000503581 10589 ntAPPRIS P3 TSL 5 BASIC2.3□□□□□ -2.04
SHKBP1Q8TBC3 RNU6-590P-201ENST00000365039 107 ntBASIC2.3□□□□□ -2.04
SHKBP1Q8TBC3 RNA5SP465-201ENST00000391195 109 ntBASIC2.3□□□□□ -2.04
SHKBP1Q8TBC3 AC019129.1-201ENST00000403786 261 ntBASIC2.3□□□□□ -2.04
SHKBP1Q8TBC3 AL591806.2-201ENST00000433122 173 ntBASIC2.3□□□□□ -2.04
SHKBP1Q8TBC3 RNU7-26P-201ENST00000458980 63 ntBASIC2.3□□□□□ -2.04
SHKBP1Q8TBC3 RPS29P11-201ENST00000496507 171 ntBASIC2.3□□□□□ -2.04
SHKBP1Q8TBC3 RNA5SP481-201ENST00000516814 122 ntBASIC2.3□□□□□ -2.04
SHKBP1Q8TBC3 AC141846.1-201ENST00000568348 142 ntBASIC2.3□□□□□ -2.04
SHKBP1Q8TBC3 AP000553.5-201ENST00000641933 54 ntBASIC2.3□□□□□ -2.04
SHKBP1Q8TBC3 AC008781.2-201ENST00000502205 2480 ntTSL 1 (best) BASIC2.3□□□□□ -2.04
SHKBP1Q8TBC3 MIPOL1-203ENST00000537471 5954 ntAPPRIS P1 TSL 5 BASIC2.29□□□□□ -2.04
SHKBP1Q8TBC3 SLITRK6-201ENST00000400286 4318 ntAPPRIS P1 TSL 1 (best) BASIC2.29□□□□□ -2.04
SHKBP1Q8TBC3 RNY1P2-201ENST00000364820 117 ntBASIC2.29□□□□□ -2.04
SHKBP1Q8TBC3 RNU4-83P-201ENST00000410863 133 ntBASIC2.29□□□□□ -2.04
SHKBP1Q8TBC3 RNU7-85P-201ENST00000458851 63 ntBASIC2.29□□□□□ -2.04
SHKBP1Q8TBC3 RNU6-557P-201ENST00000516842 110 ntBASIC2.29□□□□□ -2.04
SHKBP1Q8TBC3 AC133485.1-201ENST00000567176 124 ntBASIC2.29□□□□□ -2.04
SHKBP1Q8TBC3 SNORD38B-201ENST00000384690 67 ntBASIC2.28□□□□□ -2.04
SHKBP1Q8TBC3 MIR518A2-201ENST00000384966 87 ntBASIC2.28□□□□□ -2.04
SHKBP1Q8TBC3 MIR520C-201ENST00000385005 87 ntBASIC2.28□□□□□ -2.04
SHKBP1Q8TBC3 RNA5SP338-201ENST00000410495 85 ntBASIC2.28□□□□□ -2.04
SHKBP1Q8TBC3 SNRPGP12-201ENST00000449481 213 ntBASIC2.28□□□□□ -2.04
SHKBP1Q8TBC3 VTRNA2-2P-201ENST00000516091 103 ntBASIC2.28□□□□□ -2.04
SHKBP1Q8TBC3 RNA5SP200-201ENST00000516360 103 ntBASIC2.28□□□□□ -2.04
SHKBP1Q8TBC3 SNORD38B-202ENST00000625943 69 ntBASIC2.28□□□□□ -2.04
SHKBP1Q8TBC3 MIR219B-201ENST00000637023 88 ntBASIC2.28□□□□□ -2.04
SHKBP1Q8TBC3 RGPD1-204ENST00000559485 5247 ntAPPRIS P2 TSL 1 (best) BASIC2.28□□□□□ -2.04
SHKBP1Q8TBC3 FGF7-206ENST00000614567 3936 ntAPPRIS P1 TSL 1 (best) BASIC2.28□□□□□ -2.04
SHKBP1Q8TBC3 TRAJ50-201ENST00000390487 60 ntAPPRIS P1 BASIC2.27□□□□□ -2.05
SHKBP1Q8TBC3 RNA5SP501-201ENST00000410990 112 ntBASIC2.27□□□□□ -2.05
SHKBP1Q8TBC3 AC015712.3-201ENST00000559380 164 ntBASIC2.27□□□□□ -2.05
SHKBP1Q8TBC3 DEFB122-202ENST00000569013 197 ntBASIC2.27□□□□□ -2.05
SHKBP1Q8TBC3 AC090897.1-201ENST00000580909 226 ntBASIC2.27□□□□□ -2.05
SHKBP1Q8TBC3 AP000753.3-201ENST00000604083 169 ntBASIC2.27□□□□□ -2.05
SHKBP1Q8TBC3 AL512598.1-201ENST00000610158 273 ntBASIC2.27□□□□□ -2.05
SHKBP1Q8TBC3 AL662814.1-201ENST00000617364 121 ntBASIC2.27□□□□□ -2.05
SHKBP1Q8TBC3 LINC01790-201ENST00000447194 2852 ntTSL 2 BASIC2.26□□□□□ -2.05
SHKBP1Q8TBC3 MIRLET7A1-201ENST00000362295 80 ntBASIC2.26□□□□□ -2.05
SHKBP1Q8TBC3 SNORA38-201ENST00000363946 132 ntBASIC2.26□□□□□ -2.05
SHKBP1Q8TBC3 RNA5SP237-201ENST00000410414 113 ntBASIC2.26□□□□□ -2.05
SHKBP1Q8TBC3 SCARNA18B-201ENST00000458806 135 ntBASIC2.26□□□□□ -2.05
SHKBP1Q8TBC3 snoU13.11-201ENST00000459219 104 ntBASIC2.26□□□□□ -2.05
SHKBP1Q8TBC3 AC104435.1-201ENST00000483483 166 ntBASIC2.26□□□□□ -2.05
SHKBP1Q8TBC3 RNU6ATAC9P-201ENST00000516210 116 ntBASIC2.26□□□□□ -2.05
SHKBP1Q8TBC3 MIR3134-201ENST00000579433 74 ntBASIC2.26□□□□□ -2.05
SHKBP1Q8TBC3 MIR6132-201ENST00000622083 109 ntBASIC2.26□□□□□ -2.05
SHKBP1Q8TBC3 MIR4251-201ENST00000635819 61 ntBASIC2.26□□□□□ -2.05
SHKBP1Q8TBC3 SENP7-206ENST00000394094 4703 ntAPPRIS ALT2 TSL 1 (best) BASIC2.26□□□□□ -2.05
SHKBP1Q8TBC3 OXR1-209ENST00000517566 4501 ntTSL 1 (best) BASIC2.25□□□□□ -2.05
SHKBP1Q8TBC3 SNORA63.2-201ENST00000362603 126 ntBASIC2.25□□□□□ -2.05
SHKBP1Q8TBC3 RNU6-949P-201ENST00000384040 107 ntBASIC2.25□□□□□ -2.05
SHKBP1Q8TBC3 Y_RNA.508-201ENST00000384502 114 ntBASIC2.25□□□□□ -2.05
SHKBP1Q8TBC3 MIR144-201ENST00000384886 86 ntBASIC2.25□□□□□ -2.05
SHKBP1Q8TBC3 AC108210.2-201ENST00000503681 201 ntBASIC2.25□□□□□ -2.05
SHKBP1Q8TBC3 RNA5SP82-201ENST00000516707 92 ntBASIC2.25□□□□□ -2.05
SHKBP1Q8TBC3 RNU6-686P-201ENST00000364839 107 ntBASIC2.24□□□□□ -2.05
SHKBP1Q8TBC3 HMGN2P39-201ENST00000398005 273 ntBASIC2.24□□□□□ -2.05
SHKBP1Q8TBC3 TTTY16-201ENST00000437686 192 ntTSL 1 (best) BASIC2.24□□□□□ -2.05
SHKBP1Q8TBC3 AC027119.1-201ENST00000440877 241 ntBASIC2.24□□□□□ -2.05
SHKBP1Q8TBC3 Y_RNA.648-201ENST00000459455 110 ntBASIC2.24□□□□□ -2.05
SHKBP1Q8TBC3 AC138749.4-201ENST00000563970 127 ntBASIC2.24□□□□□ -2.05
SHKBP1Q8TBC3 MIR4796-201ENST00000580742 81 ntBASIC2.24□□□□□ -2.05
SHKBP1Q8TBC3 MIR5694-201ENST00000581190 76 ntBASIC2.24□□□□□ -2.05
SHKBP1Q8TBC3 MIR3935-201ENST00000583472 104 ntBASIC2.24□□□□□ -2.05
SHKBP1Q8TBC3 WWP1P1-201ENST00000466609 2769 ntBASIC2.24□□□□□ -2.05
SHKBP1Q8TBC3 TRAJ42-201ENST00000390495 66 ntAPPRIS P1 BASIC2.23□□□□□ -2.05
SHKBP1Q8TBC3 RPS27P21-201ENST00000486977 252 ntBASIC2.23□□□□□ -2.05
SHKBP1Q8TBC3 RNA5SP445-201ENST00000515889 115 ntBASIC2.23□□□□□ -2.05
SHKBP1Q8TBC3 RNU7-41P-201ENST00000515917 61 ntBASIC2.23□□□□□ -2.05
SHKBP1Q8TBC3 RNU6-539P-201ENST00000516665 103 ntBASIC2.23□□□□□ -2.05
SHKBP1Q8TBC3 RNU6-850P-201ENST00000516934 103 ntBASIC2.23□□□□□ -2.05
SHKBP1Q8TBC3 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC2.23□□□□□ -2.05
SHKBP1Q8TBC3 CFH-202ENST00000367429 4127 ntAPPRIS P1 TSL 1 (best) BASIC2.23□□□□□ -2.05
SHKBP1Q8TBC3 AC130466.1-201ENST00000636354 4683 ntTSL 5 BASIC2.23□□□□□ -2.05
SHKBP1Q8TBC3 AP006437.1-201ENST00000641440 3685 ntBASIC2.22□□□□□ -2.05
SHKBP1Q8TBC3 SNORA40.18-201ENST00000391200 128 ntBASIC2.22□□□□□ -2.05
SHKBP1Q8TBC3 AC244023.1-201ENST00000426884 112 ntBASIC2.22□□□□□ -2.05
SHKBP1Q8TBC3 AC005908.1-201ENST00000468701 347 ntBASIC2.22□□□□□ -2.05
SHKBP1Q8TBC3 AC079804.2-201ENST00000490376 200 ntBASIC2.22□□□□□ -2.05
SHKBP1Q8TBC3 MIR4500-201ENST00000579472 76 ntBASIC2.22□□□□□ -2.05
SHKBP1Q8TBC3 AC242498.1-201ENST00000604134 111 ntBASIC2.22□□□□□ -2.05
SHKBP1Q8TBC3 NEDD4-205ENST00000506154 6751 ntTSL 1 (best) BASIC2.22□□□□□ -2.05
SHKBP1Q8TBC3 LRRCC1-202ENST00000414626 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC2.21□□□□□ -2.06
SHKBP1Q8TBC3 RNU6-571P-201ENST00000384128 107 ntBASIC2.21□□□□□ -2.06
SHKBP1Q8TBC3 AC009474.2-201ENST00000451383 136 ntBASIC2.21□□□□□ -2.06
SHKBP1Q8TBC3 AC025887.1-201ENST00000578349 264 ntTSL 3 BASIC2.21□□□□□ -2.06
SHKBP1Q8TBC3 CAPS2-203ENST00000393284 3430 ntAPPRIS P1 TSL 1 (best) BASIC2.21□□□□□ -2.06
SHKBP1Q8TBC3 RNU6-1123P-201ENST00000362347 106 ntBASIC2.2□□□□□ -2.06
SHKBP1Q8TBC3 RNU6-161P-201ENST00000363051 106 ntBASIC2.2□□□□□ -2.06
SHKBP1Q8TBC3 RNU6-411P-201ENST00000384451 107 ntBASIC2.2□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 219.2 ms