Protein–RNA interactions for Protein: Q8TB92

HMGCLL1, 3-hydroxymethyl-3-methylglutaryl-CoA lyase, cytoplasmic, humanhuman

Predictions only

Length 370 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLL1Q8TB92 OMD-201ENST00000375550 2449 ntAPPRIS P1 TSL 1 (best) BASIC0.86□□□□□ -2.27
HMGCLL1Q8TB92 MIR1-1-201ENST00000362147 71 ntBASIC0.85□□□□□ -2.27
HMGCLL1Q8TB92 SNORD114-27-201ENST00000363766 70 ntBASIC0.85□□□□□ -2.27
HMGCLL1Q8TB92 RNU6-1187P-201ENST00000364771 110 ntBASIC0.85□□□□□ -2.27
HMGCLL1Q8TB92 Y_RNA.420-201ENST00000384043 110 ntBASIC0.85□□□□□ -2.27
HMGCLL1Q8TB92 Y_RNA.531-201ENST00000384589 121 ntBASIC0.85□□□□□ -2.27
HMGCLL1Q8TB92 Y_RNA.568-201ENST00000384742 113 ntBASIC0.85□□□□□ -2.27
HMGCLL1Q8TB92 SNORD89-201ENST00000390981 114 ntBASIC0.85□□□□□ -2.27
HMGCLL1Q8TB92 RNU6-994P-201ENST00000410507 111 ntBASIC0.85□□□□□ -2.27
HMGCLL1Q8TB92 RNU6-240P-201ENST00000516098 97 ntBASIC0.85□□□□□ -2.27
HMGCLL1Q8TB92 SNORA25.12-201ENST00000516202 82 ntBASIC0.85□□□□□ -2.27
HMGCLL1Q8TB92 RNU7-35P-201ENST00000517174 62 ntBASIC0.85□□□□□ -2.27
HMGCLL1Q8TB92 IGHVII-40-1-201ENST00000517316 58 ntBASIC0.85□□□□□ -2.27
HMGCLL1Q8TB92 RNU4-16P-201ENST00000364737 141 ntBASIC0.84□□□□□ -2.27
HMGCLL1Q8TB92 snoU13.21-201ENST00000459368 105 ntBASIC0.84□□□□□ -2.27
HMGCLL1Q8TB92 RNU2-35P-201ENST00000516446 142 ntBASIC0.84□□□□□ -2.27
HMGCLL1Q8TB92 AC004812.1-201ENST00000540773 146 ntBASIC0.84□□□□□ -2.27
HMGCLL1Q8TB92 AC141846.1-201ENST00000568348 142 ntBASIC0.84□□□□□ -2.27
HMGCLL1Q8TB92 MIR4452-201ENST00000583004 71 ntBASIC0.84□□□□□ -2.27
HMGCLL1Q8TB92 SNORA4-201ENST00000584302 138 ntBASIC0.84□□□□□ -2.27
HMGCLL1Q8TB92 AC092071.1-201ENST00000597260 549 ntTSL 5 BASIC0.84□□□□□ -2.27
HMGCLL1Q8TB92 FAM71BP1-201ENST00000604431 523 ntBASIC0.84□□□□□ -2.27
HMGCLL1Q8TB92 Y_RNA.171-201ENST00000363760 102 ntBASIC0.83□□□□□ -2.28
HMGCLL1Q8TB92 RNU6-647P-201ENST00000364243 107 ntBASIC0.83□□□□□ -2.28
HMGCLL1Q8TB92 Y_RNA.298-201ENST00000364960 107 ntBASIC0.83□□□□□ -2.28
HMGCLL1Q8TB92 Y_RNA.299-201ENST00000364973 94 ntBASIC0.83□□□□□ -2.28
HMGCLL1Q8TB92 Y_RNA.343-201ENST00000365354 112 ntBASIC0.83□□□□□ -2.28
HMGCLL1Q8TB92 RNU6-949P-201ENST00000384040 107 ntBASIC0.83□□□□□ -2.28
HMGCLL1Q8TB92 RNU7-113P-201ENST00000459273 62 ntBASIC0.83□□□□□ -2.28
HMGCLL1Q8TB92 MIR3973-201ENST00000579824 107 ntBASIC0.83□□□□□ -2.28
HMGCLL1Q8TB92 AC021443.1-201ENST00000604478 211 ntBASIC0.83□□□□□ -2.28
HMGCLL1Q8TB92 AC010332.2-201ENST00000613083 1904 ntBASIC0.83□□□□□ -2.28
HMGCLL1Q8TB92 RNU6-508P-201ENST00000363231 103 ntBASIC0.82□□□□□ -2.28
HMGCLL1Q8TB92 RNU6-746P-201ENST00000384112 109 ntBASIC0.82□□□□□ -2.28
HMGCLL1Q8TB92 RNU6ATAC27P-201ENST00000408289 119 ntBASIC0.82□□□□□ -2.28
HMGCLL1Q8TB92 RNU6ATAC31P-201ENST00000408513 126 ntBASIC0.82□□□□□ -2.28
HMGCLL1Q8TB92 AL138808.1-201ENST00000441428 371 ntTSL 2 BASIC0.82□□□□□ -2.28
HMGCLL1Q8TB92 MIR4804-201ENST00000581683 73 ntBASIC0.82□□□□□ -2.28
HMGCLL1Q8TB92 AC108081.1-201ENST00000604358 221 ntBASIC0.82□□□□□ -2.28
HMGCLL1Q8TB92 AC211469.2-201ENST00000605461 205 ntBASIC0.82□□□□□ -2.28
HMGCLL1Q8TB92 AL137067.1-201ENST00000615933 120 ntBASIC0.82□□□□□ -2.28
HMGCLL1Q8TB92 TUG1_4.1-201ENST00000619464 181 ntBASIC0.82□□□□□ -2.28
HMGCLL1Q8TB92 AC108866.1-201ENST00000503073 2339 ntTSL 5 BASIC0.82□□□□□ -2.28
HMGCLL1Q8TB92 Y_RNA.366-201ENST00000365540 102 ntBASIC0.81□□□□□ -2.28
HMGCLL1Q8TB92 Y_RNA.470-201ENST00000384307 117 ntBASIC0.81□□□□□ -2.28
HMGCLL1Q8TB92 SNORA18-201ENST00000384416 132 ntBASIC0.81□□□□□ -2.28
HMGCLL1Q8TB92 RNA5SP237-201ENST00000410414 113 ntBASIC0.81□□□□□ -2.28
HMGCLL1Q8TB92 Y_RNA.617-201ENST00000410920 90 ntBASIC0.81□□□□□ -2.28
HMGCLL1Q8TB92 SNORD83.1-201ENST00000411362 77 ntBASIC0.81□□□□□ -2.28
HMGCLL1Q8TB92 AL512326.2-201ENST00000426359 151 ntBASIC0.81□□□□□ -2.28
HMGCLL1Q8TB92 AC012668.1-201ENST00000457625 228 ntTSL 3 BASIC0.81□□□□□ -2.28
HMGCLL1Q8TB92 RNU7-185P-201ENST00000459215 60 ntBASIC0.81□□□□□ -2.28
HMGCLL1Q8TB92 RNU7-164P-201ENST00000459221 62 ntBASIC0.81□□□□□ -2.28
HMGCLL1Q8TB92 AC092892.1-201ENST00000496067 327 ntTSL 5 BASIC0.81□□□□□ -2.28
HMGCLL1Q8TB92 RNU6-426P-201ENST00000516464 97 ntBASIC0.81□□□□□ -2.28
HMGCLL1Q8TB92 Y_RNA.703-201ENST00000516846 111 ntBASIC0.81□□□□□ -2.28
HMGCLL1Q8TB92 MIR4676-201ENST00000583078 72 ntBASIC0.81□□□□□ -2.28
HMGCLL1Q8TB92 AC020891.4-201ENST00000605745 93 ntBASIC0.81□□□□□ -2.28
HMGCLL1Q8TB92 5S_rRNA.15-201ENST00000611169 127 ntBASIC0.81□□□□□ -2.28
HMGCLL1Q8TB92 RMST_2.1-201ENST00000617263 136 ntBASIC0.81□□□□□ -2.28
HMGCLL1Q8TB92 Y_RNA.114-201ENST00000363265 113 ntBASIC0.8□□□□□ -2.28
HMGCLL1Q8TB92 RNY1P13-201ENST00000365030 105 ntBASIC0.8□□□□□ -2.28
HMGCLL1Q8TB92 SNORD114-22-201ENST00000365423 72 ntBASIC0.8□□□□□ -2.28
HMGCLL1Q8TB92 RPS27-201ENST00000368567 350 ntAPPRIS P1 TSL 1 (best) BASIC0.8□□□□□ -2.28
HMGCLL1Q8TB92 IL6ST-202ENST00000381286 201 ntTSL 1 (best) BASIC0.8□□□□□ -2.28
HMGCLL1Q8TB92 RNU6-342P-201ENST00000384521 104 ntBASIC0.8□□□□□ -2.28
HMGCLL1Q8TB92 MIR608-201ENST00000384820 100 ntBASIC0.8□□□□□ -2.28
HMGCLL1Q8TB92 MIR125B2-201ENST00000385128 89 ntBASIC0.8□□□□□ -2.28
HMGCLL1Q8TB92 SNORD105-201ENST00000386910 85 ntBASIC0.8□□□□□ -2.28
HMGCLL1Q8TB92 RNU6ATAC42P-201ENST00000408637 95 ntBASIC0.8□□□□□ -2.28
HMGCLL1Q8TB92 AL158147.1-201ENST00000443970 75 ntBASIC0.8□□□□□ -2.28
HMGCLL1Q8TB92 RNU7-56P-201ENST00000458744 62 ntBASIC0.8□□□□□ -2.28
HMGCLL1Q8TB92 RPL39P28-201ENST00000465655 155 ntBASIC0.8□□□□□ -2.28
HMGCLL1Q8TB92 RNU7-123P-201ENST00000515911 60 ntBASIC0.8□□□□□ -2.28
HMGCLL1Q8TB92 RNU6-351P-201ENST00000516097 100 ntBASIC0.8□□□□□ -2.28
HMGCLL1Q8TB92 MIR4771-2-201ENST00000577758 74 ntBASIC0.8□□□□□ -2.28
HMGCLL1Q8TB92 MIR4771-1-201ENST00000582617 74 ntBASIC0.8□□□□□ -2.28
HMGCLL1Q8TB92 SNORD92-201ENST00000585078 85 ntBASIC0.8□□□□□ -2.28
HMGCLL1Q8TB92 AL353765.1-201ENST00000605514 183 ntBASIC0.8□□□□□ -2.28
HMGCLL1Q8TB92 SNORD114-2-201ENST00000363953 78 ntBASIC0.79□□□□□ -2.28
HMGCLL1Q8TB92 MIR100-201ENST00000385259 80 ntBASIC0.79□□□□□ -2.28
HMGCLL1Q8TB92 SNORA40-201ENST00000388090 126 ntBASIC0.79□□□□□ -2.28
HMGCLL1Q8TB92 AC096949.1-201ENST00000412047 152 ntBASIC0.79□□□□□ -2.28
HMGCLL1Q8TB92 AC004941.2-201ENST00000427009 228 ntBASIC0.79□□□□□ -2.28
HMGCLL1Q8TB92 MTND4LP9-201ENST00000427694 174 ntBASIC0.79□□□□□ -2.28
HMGCLL1Q8TB92 RNU7-79P-201ENST00000516082 62 ntBASIC0.79□□□□□ -2.28
HMGCLL1Q8TB92 RNA5SP33-201ENST00000516687 98 ntBASIC0.79□□□□□ -2.28
HMGCLL1Q8TB92 MIR4698-201ENST00000577795 80 ntBASIC0.79□□□□□ -2.28
HMGCLL1Q8TB92 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC0.78□□□□□ -2.28
HMGCLL1Q8TB92 MIR938-201ENST00000401216 83 ntBASIC0.78□□□□□ -2.28
HMGCLL1Q8TB92 MIR1257-201ENST00000408490 117 ntBASIC0.78□□□□□ -2.28
HMGCLL1Q8TB92 RNU4-69P-201ENST00000410677 143 ntBASIC0.78□□□□□ -2.28
HMGCLL1Q8TB92 RNA5SP136-201ENST00000410906 107 ntBASIC0.78□□□□□ -2.28
HMGCLL1Q8TB92 RN7SKP19-201ENST00000516016 252 ntBASIC0.78□□□□□ -2.28
HMGCLL1Q8TB92 IGKV1-22-201ENST00000524313 326 ntBASIC0.78□□□□□ -2.28
HMGCLL1Q8TB92 AC023934.1-201ENST00000574529 2389 ntBASIC0.77□□□□□ -2.29
HMGCLL1Q8TB92 MIRLET7F2-201ENST00000385277 83 ntBASIC0.77□□□□□ -2.29
HMGCLL1Q8TB92 U8.15-201ENST00000390947 134 ntBASIC0.77□□□□□ -2.29
HMGCLL1Q8TB92 RNU6-257P-201ENST00000410238 98 ntBASIC0.77□□□□□ -2.29
HMGCLL1Q8TB92 RNU6-977P-201ENST00000516411 103 ntBASIC0.77□□□□□ -2.29
Retrieved 100 of 98,524 protein–RNA pairs in 234.9 ms