Protein–RNA interactions for Protein: Q8IUD6

RNF135, E3 ubiquitin-protein ligase RNF135, humanhuman

Predictions only

Length 432 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF135Q8IUD6 SNORD114-1-201ENST00000362705 72 ntBASIC2.69□□□□□ -1.98
RNF135Q8IUD6 Y_RNA.57-201ENST00000362806 113 ntBASIC2.69□□□□□ -1.98
RNF135Q8IUD6 Y_RNA.98-201ENST00000363109 102 ntBASIC2.69□□□□□ -1.98
RNF135Q8IUD6 MIR1236-201ENST00000408340 102 ntBASIC2.69□□□□□ -1.98
RNF135Q8IUD6 RNU6-523P-201ENST00000516304 54 ntBASIC2.69□□□□□ -1.98
RNF135Q8IUD6 MIR4287-201ENST00000579398 78 ntBASIC2.69□□□□□ -1.98
RNF135Q8IUD6 MIR548AO-201ENST00000579992 96 ntBASIC2.69□□□□□ -1.98
RNF135Q8IUD6 AL049779.4-201ENST00000604500 156 ntBASIC2.69□□□□□ -1.98
RNF135Q8IUD6 Y_RNA.788-201ENST00000622394 112 ntBASIC2.69□□□□□ -1.98
RNF135Q8IUD6 FO624990.1-201ENST00000636373 85 ntBASIC2.69□□□□□ -1.98
RNF135Q8IUD6 NAALADL2-203ENST00000454872 9865 ntAPPRIS P1 TSL 1 (best) BASIC2.69□□□□□ -1.98
RNF135Q8IUD6 RNU6-1094P-201ENST00000362416 104 ntBASIC2.68□□□□□ -1.98
RNF135Q8IUD6 RNA5SP210-201ENST00000391034 120 ntBASIC2.68□□□□□ -1.98
RNF135Q8IUD6 AL450471.1-201ENST00000447509 127 ntBASIC2.68□□□□□ -1.98
RNF135Q8IUD6 MIR4446-201ENST00000578505 67 ntBASIC2.68□□□□□ -1.98
RNF135Q8IUD6 RNF219-AS1-214ENST00000607862 6001 ntTSL 1 (best) BASIC2.68□□□□□ -1.98
RNF135Q8IUD6 ZNF470-202ENST00000391709 6601 ntAPPRIS P1 TSL 5 BASIC2.68□□□□□ -1.98
RNF135Q8IUD6 RNA5SP133-201ENST00000363368 119 ntBASIC2.67□□□□□ -1.98
RNF135Q8IUD6 MIR1273D-201ENST00000577266 86 ntBASIC2.67□□□□□ -1.98
RNF135Q8IUD6 MIR3670-2-201ENST00000582974 65 ntBASIC2.67□□□□□ -1.98
RNF135Q8IUD6 MIR3670-1-201ENST00000584160 65 ntBASIC2.67□□□□□ -1.98
RNF135Q8IUD6 MIR3670-3-201ENST00000584855 65 ntBASIC2.67□□□□□ -1.98
RNF135Q8IUD6 MIR3670-4-201ENST00000612260 65 ntBASIC2.67□□□□□ -1.98
RNF135Q8IUD6 FAM13A-AS1_1.1-201ENST00000612555 119 ntBASIC2.67□□□□□ -1.98
RNF135Q8IUD6 AP001362.1-201ENST00000625165 124 ntBASIC2.67□□□□□ -1.98
RNF135Q8IUD6 RNU4-32P-201ENST00000363404 141 ntBASIC2.66□□□□□ -1.98
RNF135Q8IUD6 Y_RNA.338-201ENST00000365320 114 ntBASIC2.66□□□□□ -1.98
RNF135Q8IUD6 RNA5SP259-201ENST00000365541 109 ntBASIC2.66□□□□□ -1.98
RNF135Q8IUD6 RNU7-41P-201ENST00000515917 61 ntBASIC2.66□□□□□ -1.98
RNF135Q8IUD6 MIR3935-201ENST00000583472 104 ntBASIC2.66□□□□□ -1.98
RNF135Q8IUD6 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC2.66□□□□□ -1.98
RNF135Q8IUD6 PRKD3-201ENST00000234179 5900 ntAPPRIS P1 TSL 1 (best) BASIC2.66□□□□□ -1.98
RNF135Q8IUD6 AKAP9-203ENST00000359028 12247 ntAPPRIS ALT2 TSL 5 BASIC2.66□□□□□ -1.98
RNF135Q8IUD6 RNU6-624P-201ENST00000363411 107 ntBASIC2.65□□□□□ -1.99
RNF135Q8IUD6 AL161935.2-201ENST00000414627 60 ntBASIC2.65□□□□□ -1.99
RNF135Q8IUD6 GHRL-208ENST00000439975 326 ntTSL 1 (best) BASIC2.65□□□□□ -1.99
RNF135Q8IUD6 AC025887.1-201ENST00000578349 264 ntTSL 3 BASIC2.65□□□□□ -1.99
RNF135Q8IUD6 COMMD6-213ENST00000626103 120 ntTSL 5 BASIC2.65□□□□□ -1.99
RNF135Q8IUD6 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC2.65□□□□□ -1.99
RNF135Q8IUD6 SNORD38B-201ENST00000384690 67 ntBASIC2.64□□□□□ -1.99
RNF135Q8IUD6 MIR513A1-201ENST00000385138 129 ntBASIC2.64□□□□□ -1.99
RNF135Q8IUD6 JTBP1-201ENST00000441314 247 ntBASIC2.64□□□□□ -1.99
RNF135Q8IUD6 HMGN2P23-201ENST00000456759 269 ntBASIC2.64□□□□□ -1.99
RNF135Q8IUD6 SNORD4B-201ENST00000459083 72 ntBASIC2.64□□□□□ -1.99
RNF135Q8IUD6 ST7-AS2_1.1-201ENST00000622900 72 ntBASIC2.64□□□□□ -1.99
RNF135Q8IUD6 SNORD38B-202ENST00000625943 69 ntBASIC2.64□□□□□ -1.99
RNF135Q8IUD6 AGL-204ENST00000370161 6923 ntTSL 5 BASIC2.64□□□□□ -1.99
RNF135Q8IUD6 HSBP1P2-201ENST00000299671 229 ntBASIC2.63□□□□□ -1.99
RNF135Q8IUD6 RNU6-439P-201ENST00000384188 106 ntBASIC2.63□□□□□ -1.99
RNF135Q8IUD6 AC019129.1-201ENST00000403786 261 ntBASIC2.63□□□□□ -1.99
RNF135Q8IUD6 SNORD111.1-201ENST00000516421 86 ntBASIC2.63□□□□□ -1.99
RNF135Q8IUD6 Y_RNA.226-201ENST00000364337 114 ntBASIC2.62□□□□□ -1.99
RNF135Q8IUD6 RNY1P13-201ENST00000365030 105 ntBASIC2.62□□□□□ -1.99
RNF135Q8IUD6 SNORA6-201ENST00000384033 151 ntBASIC2.62□□□□□ -1.99
RNF135Q8IUD6 RNU6-1237P-201ENST00000384777 107 ntBASIC2.62□□□□□ -1.99
RNF135Q8IUD6 TRAJ42-201ENST00000390495 66 ntAPPRIS P1 BASIC2.62□□□□□ -1.99
RNF135Q8IUD6 RNA5SP212-201ENST00000391223 107 ntBASIC2.62□□□□□ -1.99
RNF135Q8IUD6 ZNRD1-AS1_1.6-201ENST00000610339 68 ntBASIC2.62□□□□□ -1.99
RNF135Q8IUD6 TRAJ36-201ENST00000614481 58 ntAPPRIS P1 BASIC2.62□□□□□ -1.99
RNF135Q8IUD6 DNAH7-201ENST00000312428 12394 ntAPPRIS P1 TSL 1 (best) BASIC2.62□□□□□ -1.99
RNF135Q8IUD6 PCM1-222ENST00000524226 5955 ntTSL 1 (best) BASIC2.62□□□□□ -1.99
RNF135Q8IUD6 FSIP2-206ENST00000611759 3882 ntAPPRIS ALT2 TSL 5 BASIC2.62□□□□□ -1.99
RNF135Q8IUD6 RNA5SP48-201ENST00000363969 126 ntBASIC2.61□□□□□ -1.99
RNF135Q8IUD6 AC009474.2-201ENST00000451383 136 ntBASIC2.61□□□□□ -1.99
RNF135Q8IUD6 SCARNA18B-201ENST00000458806 135 ntBASIC2.61□□□□□ -1.99
RNF135Q8IUD6 snoU13.11-201ENST00000459219 104 ntBASIC2.61□□□□□ -1.99
RNF135Q8IUD6 RNU6-539P-201ENST00000516665 103 ntBASIC2.61□□□□□ -1.99
RNF135Q8IUD6 RNU6-557P-201ENST00000516842 110 ntBASIC2.61□□□□□ -1.99
RNF135Q8IUD6 MIR8066-201ENST00000617280 78 ntBASIC2.61□□□□□ -1.99
RNF135Q8IUD6 ARHGAP5-202ENST00000345122 9604 ntAPPRIS P3 TSL 5 BASIC2.61□□□□□ -1.99
RNF135Q8IUD6 NEDD1-204ENST00000457368 3162 ntTSL 2 BASIC2.6□□□□□ -1.99
RNF135Q8IUD6 MIRLET7A1-201ENST00000362295 80 ntBASIC2.6□□□□□ -1.99
RNF135Q8IUD6 SNORD41-201ENST00000386967 70 ntBASIC2.6□□□□□ -1.99
RNF135Q8IUD6 RPS29P11-201ENST00000496507 171 ntBASIC2.6□□□□□ -1.99
RNF135Q8IUD6 AC133485.1-201ENST00000567176 124 ntBASIC2.6□□□□□ -1.99
RNF135Q8IUD6 MIR3134-201ENST00000579433 74 ntBASIC2.6□□□□□ -1.99
RNF135Q8IUD6 AC034238.1-213ENST00000611148 150 ntTSL 5 BASIC2.6□□□□□ -1.99
RNF135Q8IUD6 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC2.6□□□□□ -1.99
RNF135Q8IUD6 AC008781.2-201ENST00000502205 2480 ntTSL 1 (best) BASIC2.59□□□□□ -1.99
RNF135Q8IUD6 ENAM-201ENST00000396073 5679 ntAPPRIS P1 TSL 1 (best) BASIC2.59□□□□□ -1.99
RNF135Q8IUD6 SNORA16B-201ENST00000364674 135 ntBASIC2.59□□□□□ -1.99
RNF135Q8IUD6 TRAJ26-201ENST00000390511 60 ntAPPRIS P1 BASIC2.59□□□□□ -1.99
RNF135Q8IUD6 FGF7-201ENST00000267843 5467 ntAPPRIS P1 TSL 1 (best) BASIC2.59□□□□□ -2
RNF135Q8IUD6 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC2.58□□□□□ -2
RNF135Q8IUD6 AL359511.1-201ENST00000402970 211 ntBASIC2.58□□□□□ -2
RNF135Q8IUD6 RNA5SP237-201ENST00000410414 113 ntBASIC2.58□□□□□ -2
RNF135Q8IUD6 RNU7-85P-201ENST00000458851 63 ntBASIC2.58□□□□□ -2
RNF135Q8IUD6 AC074131.1-201ENST00000514662 253 ntTSL 2 BASIC2.58□□□□□ -2
RNF135Q8IUD6 RNU6-922P-201ENST00000516753 99 ntBASIC2.58□□□□□ -2
RNF135Q8IUD6 AL512598.1-201ENST00000610158 273 ntBASIC2.58□□□□□ -2
RNF135Q8IUD6 ASPM-202ENST00000367408 3747 ntTSL 1 (best) BASIC2.58□□□□□ -2
RNF135Q8IUD6 SNORA63.2-201ENST00000362603 126 ntBASIC2.57□□□□□ -2
RNF135Q8IUD6 RNU6-686P-201ENST00000364839 107 ntBASIC2.57□□□□□ -2
RNF135Q8IUD6 RNU4-83P-201ENST00000410863 133 ntBASIC2.57□□□□□ -2
RNF135Q8IUD6 AC244636.1-201ENST00000421152 228 ntBASIC2.57□□□□□ -2
RNF135Q8IUD6 AC141846.1-201ENST00000568348 142 ntBASIC2.57□□□□□ -2
RNF135Q8IUD6 AC090897.1-201ENST00000580909 226 ntBASIC2.57□□□□□ -2
RNF135Q8IUD6 AP000753.3-201ENST00000604083 169 ntBASIC2.57□□□□□ -2
RNF135Q8IUD6 RNU6-411P-201ENST00000384451 107 ntBASIC2.56□□□□□ -2
RNF135Q8IUD6 Y_RNA.508-201ENST00000384502 114 ntBASIC2.56□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 266.8 ms