Protein–RNA interactions for Protein: Q86TL0

ATG4D, Cysteine protease ATG4D, humanhuman

Predicted RBP Predictions only

Length 474 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4DQ86TL0 BX276092.1-201ENST00000427368 251 ntBASIC2.13□□□□□ -2.07
ATG4DQ86TL0 SNRPGP12-201ENST00000449481 213 ntBASIC2.13□□□□□ -2.07
ATG4DQ86TL0 RNU7-26P-201ENST00000458980 63 ntBASIC2.13□□□□□ -2.07
ATG4DQ86TL0 RNU7-41P-201ENST00000515917 61 ntBASIC2.13□□□□□ -2.07
ATG4DQ86TL0 RNU6ATAC9P-201ENST00000516210 116 ntBASIC2.13□□□□□ -2.07
ATG4DQ86TL0 AC121758.2-201ENST00000553271 193 ntBASIC2.13□□□□□ -2.07
ATG4DQ86TL0 AC138749.4-201ENST00000563970 127 ntBASIC2.13□□□□□ -2.07
ATG4DQ86TL0 AL137847.3-201ENST00000611521 109 ntBASIC2.13□□□□□ -2.07
ATG4DQ86TL0 MIR4251-201ENST00000635819 61 ntBASIC2.13□□□□□ -2.07
ATG4DQ86TL0 NEDD1-204ENST00000457368 3162 ntTSL 2 BASIC2.12□□□□□ -2.07
ATG4DQ86TL0 Y_RNA.340-201ENST00000365330 92 ntBASIC2.12□□□□□ -2.07
ATG4DQ86TL0 MIR518A2-201ENST00000384966 87 ntBASIC2.12□□□□□ -2.07
ATG4DQ86TL0 RNU1-41P-201ENST00000516161 162 ntBASIC2.12□□□□□ -2.07
ATG4DQ86TL0 RNU1-48P-201ENST00000516400 162 ntBASIC2.12□□□□□ -2.07
ATG4DQ86TL0 AC025887.1-201ENST00000578349 264 ntTSL 3 BASIC2.12□□□□□ -2.07
ATG4DQ86TL0 AL449363.1-201ENST00000617815 186 ntBASIC2.12□□□□□ -2.07
ATG4DQ86TL0 AGL-204ENST00000370161 6923 ntTSL 5 BASIC2.12□□□□□ -2.07
ATG4DQ86TL0 SLITRK6-201ENST00000400286 4318 ntAPPRIS P1 TSL 1 (best) BASIC2.12□□□□□ -2.07
ATG4DQ86TL0 NAALADL2-203ENST00000454872 9865 ntAPPRIS P1 TSL 1 (best) BASIC2.11□□□□□ -2.07
ATG4DQ86TL0 RNU6-949P-201ENST00000384040 107 ntBASIC2.11□□□□□ -2.07
ATG4DQ86TL0 RNU6-811P-201ENST00000384069 107 ntBASIC2.11□□□□□ -2.07
ATG4DQ86TL0 MIR635-201ENST00000384830 98 ntBASIC2.11□□□□□ -2.07
ATG4DQ86TL0 RNU6ATAC42P-201ENST00000408637 95 ntBASIC2.11□□□□□ -2.07
ATG4DQ86TL0 MIR1261-201ENST00000408659 82 ntBASIC2.11□□□□□ -2.07
ATG4DQ86TL0 Y_RNA.648-201ENST00000459455 110 ntBASIC2.11□□□□□ -2.07
ATG4DQ86TL0 AC125388.1-201ENST00000459631 156 ntBASIC2.11□□□□□ -2.07
ATG4DQ86TL0 RNA5SP24-201ENST00000516478 95 ntBASIC2.11□□□□□ -2.07
ATG4DQ86TL0 SNORA31.11-201ENST00000516528 139 ntBASIC2.11□□□□□ -2.07
ATG4DQ86TL0 RNU6-448P-201ENST00000517052 107 ntBASIC2.11□□□□□ -2.07
ATG4DQ86TL0 RNU4ATAC9P-201ENST00000517146 126 ntBASIC2.11□□□□□ -2.07
ATG4DQ86TL0 RNA5SP402-201ENST00000517148 110 ntBASIC2.11□□□□□ -2.07
ATG4DQ86TL0 MIR5007-201ENST00000583098 95 ntBASIC2.11□□□□□ -2.07
ATG4DQ86TL0 U6.109-201ENST00000636749 87 ntBASIC2.11□□□□□ -2.07
ATG4DQ86TL0 DNAH7-201ENST00000312428 12394 ntAPPRIS P1 TSL 1 (best) BASIC2.1□□□□□ -2.07
ATG4DQ86TL0 AGTPBP1-205ENST00000376083 4208 ntAPPRIS P1 TSL 1 (best) BASIC2.1□□□□□ -2.07
ATG4DQ86TL0 MIR524-201ENST00000385242 87 ntBASIC2.1□□□□□ -2.07
ATG4DQ86TL0 RNU6-380P-201ENST00000410207 107 ntBASIC2.1□□□□□ -2.07
ATG4DQ86TL0 RNU4-53P-201ENST00000410828 140 ntBASIC2.1□□□□□ -2.07
ATG4DQ86TL0 AC244023.1-201ENST00000426884 112 ntBASIC2.1□□□□□ -2.07
ATG4DQ86TL0 AL162400.2-201ENST00000427547 157 ntTSL 3 BASIC2.1□□□□□ -2.07
ATG4DQ86TL0 AC009474.2-201ENST00000451383 136 ntBASIC2.1□□□□□ -2.07
ATG4DQ86TL0 RNU6-70P-201ENST00000516438 60 ntBASIC2.1□□□□□ -2.07
ATG4DQ86TL0 SNORA18.5-201ENST00000516616 101 ntBASIC2.1□□□□□ -2.07
ATG4DQ86TL0 RNA5SP481-201ENST00000516814 122 ntBASIC2.1□□□□□ -2.07
ATG4DQ86TL0 RNA5SP137-201ENST00000516833 135 ntBASIC2.1□□□□□ -2.07
ATG4DQ86TL0 MIR3935-201ENST00000583472 104 ntBASIC2.1□□□□□ -2.07
ATG4DQ86TL0 AC242498.1-201ENST00000604134 111 ntBASIC2.1□□□□□ -2.07
ATG4DQ86TL0 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC2.1□□□□□ -2.07
ATG4DQ86TL0 MIR664A-201ENST00000626086 82 ntBASIC2.1□□□□□ -2.07
ATG4DQ86TL0 OMD-201ENST00000375550 2449 ntAPPRIS P1 TSL 1 (best) BASIC2.1□□□□□ -2.07
ATG4DQ86TL0 TTK-202ENST00000369798 3010 ntAPPRIS P3 TSL 1 (best) BASIC2.09□□□□□ -2.07
ATG4DQ86TL0 SNORA72.6-201ENST00000384520 129 ntBASIC2.09□□□□□ -2.07
ATG4DQ86TL0 RNA5SP465-201ENST00000391195 109 ntBASIC2.09□□□□□ -2.07
ATG4DQ86TL0 SNORA40.18-201ENST00000391200 128 ntBASIC2.09□□□□□ -2.07
ATG4DQ86TL0 MIR3124-201ENST00000582636 67 ntBASIC2.09□□□□□ -2.07
ATG4DQ86TL0 MIR4536-1-201ENST00000583537 88 ntBASIC2.09□□□□□ -2.07
ATG4DQ86TL0 MIR6766-201ENST00000622641 72 ntBASIC2.09□□□□□ -2.07
ATG4DQ86TL0 Y_RNA.119-201ENST00000363301 96 ntBASIC2.08□□□□□ -2.08
ATG4DQ86TL0 SNORA25.9-201ENST00000365087 128 ntBASIC2.08□□□□□ -2.08
ATG4DQ86TL0 RNU6-132P-201ENST00000383863 107 ntBASIC2.08□□□□□ -2.08
ATG4DQ86TL0 MIR516A2-201ENST00000384888 90 ntBASIC2.08□□□□□ -2.08
ATG4DQ86TL0 MIR516A1-201ENST00000385033 90 ntBASIC2.08□□□□□ -2.08
ATG4DQ86TL0 HSPE1P24-201ENST00000450782 238 ntBASIC2.08□□□□□ -2.08
ATG4DQ86TL0 RNU6-871P-201ENST00000516122 100 ntBASIC2.08□□□□□ -2.08
ATG4DQ86TL0 WWP1P1-201ENST00000466609 2769 ntBASIC2.07□□□□□ -2.08
ATG4DQ86TL0 ZNF658B-202ENST00000615961 3375 ntBASIC2.07□□□□□ -2.08
ATG4DQ86TL0 MIR588-201ENST00000384900 83 ntBASIC2.07□□□□□ -2.08
ATG4DQ86TL0 TRAJ1-201ENST00000390536 62 ntAPPRIS P1 BASIC2.07□□□□□ -2.08
ATG4DQ86TL0 MIR1265-201ENST00000408444 86 ntBASIC2.07□□□□□ -2.08
ATG4DQ86TL0 FGF7P7-201ENST00000514120 227 ntBASIC2.07□□□□□ -2.08
ATG4DQ86TL0 RNU6-687P-201ENST00000516443 89 ntBASIC2.07□□□□□ -2.08
ATG4DQ86TL0 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC2.07□□□□□ -2.08
ATG4DQ86TL0 ZNF654-201ENST00000309495 4957 ntAPPRIS P2 TSL 1 (best) BASIC2.07□□□□□ -2.08
ATG4DQ86TL0 FGF7-201ENST00000267843 5467 ntAPPRIS P1 TSL 1 (best) BASIC2.07□□□□□ -2.08
ATG4DQ86TL0 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC2.06□□□□□ -2.08
ATG4DQ86TL0 SENP7-206ENST00000394094 4703 ntAPPRIS ALT2 TSL 1 (best) BASIC2.06□□□□□ -2.08
ATG4DQ86TL0 SNORD36A-201ENST00000362874 73 ntBASIC2.06□□□□□ -2.08
ATG4DQ86TL0 U8.2-201ENST00000363156 134 ntBASIC2.06□□□□□ -2.08
ATG4DQ86TL0 RNU6-203P-201ENST00000384038 104 ntBASIC2.06□□□□□ -2.08
ATG4DQ86TL0 RNU6-571P-201ENST00000384128 107 ntBASIC2.06□□□□□ -2.08
ATG4DQ86TL0 SNORA70B-201ENST00000384210 135 ntBASIC2.06□□□□□ -2.08
ATG4DQ86TL0 TRAJ50-201ENST00000390487 60 ntAPPRIS P1 BASIC2.06□□□□□ -2.08
ATG4DQ86TL0 HMGN2P39-201ENST00000398005 273 ntBASIC2.06□□□□□ -2.08
ATG4DQ86TL0 snoU13.2-201ENST00000459201 104 ntBASIC2.06□□□□□ -2.08
ATG4DQ86TL0 RNU6-75P-201ENST00000515944 104 ntBASIC2.06□□□□□ -2.08
ATG4DQ86TL0 MIR3064-201ENST00000581130 66 ntBASIC2.06□□□□□ -2.08
ATG4DQ86TL0 PRELID3BP2-201ENST00000605362 201 ntBASIC2.06□□□□□ -2.08
ATG4DQ86TL0 RGPD1-204ENST00000559485 5247 ntAPPRIS P2 TSL 1 (best) BASIC2.06□□□□□ -2.08
ATG4DQ86TL0 SNORD77.2-201ENST00000391045 68 ntBASIC2.05□□□□□ -2.08
ATG4DQ86TL0 SNORD90-201ENST00000391145 111 ntBASIC2.05□□□□□ -2.08
ATG4DQ86TL0 Y_RNA.660-201ENST00000516002 120 ntBASIC2.05□□□□□ -2.08
ATG4DQ86TL0 AC104996.3-201ENST00000590718 94 ntBASIC2.05□□□□□ -2.08
ATG4DQ86TL0 MIR6895-201ENST00000613497 78 ntBASIC2.05□□□□□ -2.08
ATG4DQ86TL0 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC2.04□□□□□ -2.08
ATG4DQ86TL0 MIPOL1-203ENST00000537471 5954 ntAPPRIS P1 TSL 5 BASIC2.04□□□□□ -2.08
ATG4DQ86TL0 MIR144-201ENST00000384886 86 ntBASIC2.04□□□□□ -2.08
ATG4DQ86TL0 RNU4ATAC16P-201ENST00000408512 126 ntBASIC2.04□□□□□ -2.08
ATG4DQ86TL0 Y_RNA.681-201ENST00000516445 113 ntBASIC2.04□□□□□ -2.08
ATG4DQ86TL0 DEFB122-202ENST00000569013 197 ntBASIC2.04□□□□□ -2.08
ATG4DQ86TL0 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC2.04□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 124.5 ms