Protein–RNA interactions for Protein: Q7Z6J0

SH3RF1, E3 ubiquitin-protein ligase SH3RF1, humanhuman

Predictions only

Length 888 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF1Q7Z6J0 AL512598.1-201ENST00000610158 273 ntBASIC2.83□□□□□ -1.96
SH3RF1Q7Z6J0 FAM13A-AS1_1.1-201ENST00000612555 119 ntBASIC2.83□□□□□ -1.96
SH3RF1Q7Z6J0 MIR8066-201ENST00000617280 78 ntBASIC2.83□□□□□ -1.96
SH3RF1Q7Z6J0 MIR4251-201ENST00000635819 61 ntBASIC2.83□□□□□ -1.96
SH3RF1Q7Z6J0 ZNF470-202ENST00000391709 6601 ntAPPRIS P1 TSL 5 BASIC2.83□□□□□ -1.96
SH3RF1Q7Z6J0 RICTOR-202ENST00000357387 9543 ntAPPRIS P1 TSL 1 (best) BASIC2.83□□□□□ -1.96
SH3RF1Q7Z6J0 AC008163.1-202ENST00000636004 2889 ntBASIC2.82□□□□□ -1.96
SH3RF1Q7Z6J0 RNU6-161P-201ENST00000363051 106 ntBASIC2.82□□□□□ -1.96
SH3RF1Q7Z6J0 AC027119.1-201ENST00000440877 241 ntBASIC2.82□□□□□ -1.96
SH3RF1Q7Z6J0 RNU6-322P-201ENST00000516010 103 ntBASIC2.82□□□□□ -1.96
SH3RF1Q7Z6J0 MIR548AO-201ENST00000579992 96 ntBASIC2.82□□□□□ -1.96
SH3RF1Q7Z6J0 MIR4796-201ENST00000580742 81 ntBASIC2.82□□□□□ -1.96
SH3RF1Q7Z6J0 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC2.82□□□□□ -1.96
SH3RF1Q7Z6J0 RNU6-1123P-201ENST00000362347 106 ntBASIC2.81□□□□□ -1.96
SH3RF1Q7Z6J0 VTRNA1-1-201ENST00000363120 99 ntBASIC2.81□□□□□ -1.96
SH3RF1Q7Z6J0 RNY1P13-201ENST00000365030 105 ntBASIC2.81□□□□□ -1.96
SH3RF1Q7Z6J0 DEFA7P-201ENST00000382676 285 ntBASIC2.81□□□□□ -1.96
SH3RF1Q7Z6J0 RNU4-37P-201ENST00000410214 84 ntBASIC2.81□□□□□ -1.96
SH3RF1Q7Z6J0 RNA5SP270-201ENST00000411361 118 ntBASIC2.81□□□□□ -1.96
SH3RF1Q7Z6J0 AC011753.1-201ENST00000451001 220 ntBASIC2.81□□□□□ -1.96
SH3RF1Q7Z6J0 RPS29P11-201ENST00000496507 171 ntBASIC2.81□□□□□ -1.96
SH3RF1Q7Z6J0 AC025887.1-201ENST00000578349 264 ntTSL 3 BASIC2.81□□□□□ -1.96
SH3RF1Q7Z6J0 AP000753.3-201ENST00000604083 169 ntBASIC2.81□□□□□ -1.96
SH3RF1Q7Z6J0 RNU6-649P-201ENST00000384463 107 ntBASIC2.8□□□□□ -1.96
SH3RF1Q7Z6J0 MIR520H-201ENST00000385126 88 ntBASIC2.8□□□□□ -1.96
SH3RF1Q7Z6J0 RNU6ATAC3P-201ENST00000387974 126 ntBASIC2.8□□□□□ -1.96
SH3RF1Q7Z6J0 5S_rRNA.2-201ENST00000391293 112 ntBASIC2.8□□□□□ -1.96
SH3RF1Q7Z6J0 RNU6-70P-201ENST00000516438 60 ntBASIC2.8□□□□□ -1.96
SH3RF1Q7Z6J0 ST7-AS2_1.1-201ENST00000622900 72 ntBASIC2.8□□□□□ -1.96
SH3RF1Q7Z6J0 AC008781.2-201ENST00000502205 2480 ntTSL 1 (best) BASIC2.79□□□□□ -1.96
SH3RF1Q7Z6J0 SNORA25.9-201ENST00000365087 128 ntBASIC2.79□□□□□ -1.96
SH3RF1Q7Z6J0 RNU6-360P-201ENST00000390944 104 ntBASIC2.79□□□□□ -1.96
SH3RF1Q7Z6J0 RNU6-1108P-201ENST00000516308 104 ntBASIC2.79□□□□□ -1.96
SH3RF1Q7Z6J0 Y_RNA.681-201ENST00000516445 113 ntBASIC2.79□□□□□ -1.96
SH3RF1Q7Z6J0 MIR1297-201ENST00000637311 77 ntBASIC2.79□□□□□ -1.96
SH3RF1Q7Z6J0 KCNIP4-IT1-201ENST00000627566 9848 ntBASIC2.79□□□□□ -1.96
SH3RF1Q7Z6J0 MYSM1-208ENST00000622766 6020 ntTSL 1 (best) BASIC2.78□□□□□ -1.96
SH3RF1Q7Z6J0 FAM46D-201ENST00000308293 3011 ntAPPRIS P1 TSL 1 (best) BASIC2.78□□□□□ -1.96
SH3RF1Q7Z6J0 Y_RNA.648-201ENST00000459455 110 ntBASIC2.78□□□□□ -1.96
SH3RF1Q7Z6J0 RNU6-807P-201ENST00000516805 107 ntBASIC2.78□□□□□ -1.96
SH3RF1Q7Z6J0 AC141846.1-201ENST00000568348 142 ntBASIC2.78□□□□□ -1.96
SH3RF1Q7Z6J0 MACC1-202ENST00000400331 9159 ntAPPRIS P1 TSL 2 BASIC2.78□□□□□ -1.96
SH3RF1Q7Z6J0 TAB3-205ENST00000378933 6671 ntAPPRIS P1 TSL 1 (best) BASIC2.78□□□□□ -1.97
SH3RF1Q7Z6J0 RNU5F-1-201ENST00000362507 117 ntBASIC2.77□□□□□ -1.97
SH3RF1Q7Z6J0 SNORD114-1-201ENST00000362705 72 ntBASIC2.77□□□□□ -1.97
SH3RF1Q7Z6J0 RNU4-83P-201ENST00000410863 133 ntBASIC2.77□□□□□ -1.97
SH3RF1Q7Z6J0 AL662814.1-201ENST00000617364 121 ntBASIC2.77□□□□□ -1.97
SH3RF1Q7Z6J0 PCM1-222ENST00000524226 5955 ntTSL 1 (best) BASIC2.77□□□□□ -1.97
SH3RF1Q7Z6J0 FAR1-204ENST00000532502 5820 ntTSL 2 BASIC2.76□□□□□ -1.97
SH3RF1Q7Z6J0 AC016717.2-201ENST00000609089 5141 ntBASIC2.76□□□□□ -1.97
SH3RF1Q7Z6J0 MIR21-201ENST00000362134 72 ntBASIC2.76□□□□□ -1.97
SH3RF1Q7Z6J0 RNU6-800P-201ENST00000384473 103 ntBASIC2.76□□□□□ -1.97
SH3RF1Q7Z6J0 RNU6-540P-201ENST00000384622 101 ntBASIC2.76□□□□□ -1.97
SH3RF1Q7Z6J0 MIR635-201ENST00000384830 98 ntBASIC2.76□□□□□ -1.97
SH3RF1Q7Z6J0 RNA5SP181-201ENST00000410246 98 ntBASIC2.76□□□□□ -1.97
SH3RF1Q7Z6J0 RNA5SP247-201ENST00000411181 105 ntBASIC2.76□□□□□ -1.97
SH3RF1Q7Z6J0 AL356320.1-201ENST00000429616 163 ntBASIC2.76□□□□□ -1.97
SH3RF1Q7Z6J0 MIR1273D-201ENST00000577266 86 ntBASIC2.76□□□□□ -1.97
SH3RF1Q7Z6J0 MIR4484-201ENST00000582855 83 ntBASIC2.76□□□□□ -1.97
SH3RF1Q7Z6J0 RNY1P2-201ENST00000364820 117 ntBASIC2.75□□□□□ -1.97
SH3RF1Q7Z6J0 RNU6-471P-201ENST00000383944 106 ntBASIC2.75□□□□□ -1.97
SH3RF1Q7Z6J0 RNU6-587P-201ENST00000391282 106 ntBASIC2.75□□□□□ -1.97
SH3RF1Q7Z6J0 RNA5SP100-201ENST00000410903 110 ntBASIC2.75□□□□□ -1.97
SH3RF1Q7Z6J0 RNA5SP59-201ENST00000410922 110 ntBASIC2.75□□□□□ -1.97
SH3RF1Q7Z6J0 SNRPGP12-201ENST00000449481 213 ntBASIC2.75□□□□□ -1.97
SH3RF1Q7Z6J0 5S_rRNA.3-201ENST00000517021 110 ntBASIC2.75□□□□□ -1.97
SH3RF1Q7Z6J0 AC046143.2-201ENST00000609789 160 ntBASIC2.75□□□□□ -1.97
SH3RF1Q7Z6J0 AC034238.1-213ENST00000611148 150 ntTSL 5 BASIC2.75□□□□□ -1.97
SH3RF1Q7Z6J0 5S_rRNA.19-201ENST00000612131 110 ntBASIC2.75□□□□□ -1.97
SH3RF1Q7Z6J0 5S_rRNA.18-201ENST00000621941 110 ntBASIC2.75□□□□□ -1.97
SH3RF1Q7Z6J0 U6.111-201ENST00000636093 83 ntBASIC2.75□□□□□ -1.97
SH3RF1Q7Z6J0 NEDD1-204ENST00000457368 3162 ntTSL 2 BASIC2.75□□□□□ -1.97
SH3RF1Q7Z6J0 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC2.74□□□□□ -1.97
SH3RF1Q7Z6J0 RNU6-949P-201ENST00000384040 107 ntBASIC2.74□□□□□ -1.97
SH3RF1Q7Z6J0 RNA5SP292-201ENST00000390974 118 ntBASIC2.74□□□□□ -1.97
SH3RF1Q7Z6J0 AL359511.1-201ENST00000402970 211 ntBASIC2.74□□□□□ -1.97
SH3RF1Q7Z6J0 MTND4LP19-201ENST00000403051 166 ntBASIC2.74□□□□□ -1.97
SH3RF1Q7Z6J0 AC019129.1-201ENST00000403786 261 ntBASIC2.74□□□□□ -1.97
SH3RF1Q7Z6J0 AC074348.1-201ENST00000426503 132 ntBASIC2.74□□□□□ -1.97
SH3RF1Q7Z6J0 GHRL-208ENST00000439975 326 ntTSL 1 (best) BASIC2.74□□□□□ -1.97
SH3RF1Q7Z6J0 SNORA31.17-201ENST00000516953 127 ntBASIC2.74□□□□□ -1.97
SH3RF1Q7Z6J0 CERS6-AS1-202ENST00000594898 499 ntTSL 5 BASIC2.74□□□□□ -1.97
SH3RF1Q7Z6J0 AC067747.1-201ENST00000608026 250 ntBASIC2.74□□□□□ -1.97
SH3RF1Q7Z6J0 GS1-279B7.1-204ENST00000641809 378 ntBASIC2.74□□□□□ -1.97
SH3RF1Q7Z6J0 OMD-201ENST00000375550 2449 ntAPPRIS P1 TSL 1 (best) BASIC2.73□□□□□ -1.97
SH3RF1Q7Z6J0 PCDH11Y-201ENST00000215473 4595 ntAPPRIS ALT2 TSL 1 (best) BASIC2.73□□□□□ -1.97
SH3RF1Q7Z6J0 RNA5SP48-201ENST00000363969 126 ntBASIC2.73□□□□□ -1.97
SH3RF1Q7Z6J0 RNU1-52P-201ENST00000384190 164 ntBASIC2.73□□□□□ -1.97
SH3RF1Q7Z6J0 SUMO1P4-201ENST00000429430 302 ntBASIC2.73□□□□□ -1.97
SH3RF1Q7Z6J0 RPS27P21-201ENST00000486977 252 ntBASIC2.73□□□□□ -1.97
SH3RF1Q7Z6J0 AL353997.5-201ENST00000618886 171 ntBASIC2.73□□□□□ -1.97
SH3RF1Q7Z6J0 MIR664A-201ENST00000626086 82 ntBASIC2.73□□□□□ -1.97
SH3RF1Q7Z6J0 AC068733.3-201ENST00000632757 269 ntTSL 3 BASIC2.73□□□□□ -1.97
SH3RF1Q7Z6J0 STX7-202ENST00000367941 15791 ntAPPRIS P1 TSL 1 (best) BASIC2.73□□□□□ -1.97
SH3RF1Q7Z6J0 Y_RNA.264-201ENST00000364665 102 ntBASIC2.72□□□□□ -1.97
SH3RF1Q7Z6J0 RNU6-811P-201ENST00000384069 107 ntBASIC2.72□□□□□ -1.97
SH3RF1Q7Z6J0 SNORD77.2-201ENST00000391045 68 ntBASIC2.72□□□□□ -1.97
SH3RF1Q7Z6J0 SNORD30.1-201ENST00000391309 70 ntBASIC2.72□□□□□ -1.97
SH3RF1Q7Z6J0 HMGN2P23-201ENST00000456759 269 ntBASIC2.72□□□□□ -1.97
SH3RF1Q7Z6J0 AC005908.1-201ENST00000468701 347 ntBASIC2.72□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 104.2 ms