Protein–RNA interactions for Protein: Q08174

PCDH1, Protocadherin-1, humanhuman

Predictions only

Length 1,060 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH1Q08174 SNORD78.1-201ENST00000390866 65 ntBASIC2.15□□□□□ -2.07
PCDH1Q08174 MIR1302-7-201ENST00000408841 72 ntBASIC2.15□□□□□ -2.07
PCDH1Q08174 RNA5SP425-201ENST00000410336 112 ntBASIC2.15□□□□□ -2.07
PCDH1Q08174 RNU4-53P-201ENST00000410828 140 ntBASIC2.15□□□□□ -2.07
PCDH1Q08174 Y_RNA.685-201ENST00000516532 108 ntBASIC2.15□□□□□ -2.07
PCDH1Q08174 AC133485.1-201ENST00000567176 124 ntBASIC2.15□□□□□ -2.07
PCDH1Q08174 CERS6-AS1-202ENST00000594898 499 ntTSL 5 BASIC2.15□□□□□ -2.07
PCDH1Q08174 PRKD3-201ENST00000234179 5900 ntAPPRIS P1 TSL 1 (best) BASIC2.15□□□□□ -2.07
PCDH1Q08174 FGF7-206ENST00000614567 3936 ntAPPRIS P1 TSL 1 (best) BASIC2.14□□□□□ -2.07
PCDH1Q08174 MIRLET7G-201ENST00000362280 84 ntBASIC2.14□□□□□ -2.07
PCDH1Q08174 RNA5SP289-201ENST00000362332 137 ntBASIC2.14□□□□□ -2.07
PCDH1Q08174 RNU6-219P-201ENST00000364728 107 ntBASIC2.14□□□□□ -2.07
PCDH1Q08174 RNA5SP138-201ENST00000365098 114 ntBASIC2.14□□□□□ -2.07
PCDH1Q08174 RNU6-396P-201ENST00000365369 105 ntBASIC2.14□□□□□ -2.07
PCDH1Q08174 RNA5SP37-201ENST00000365420 130 ntBASIC2.14□□□□□ -2.07
PCDH1Q08174 RNU4-52P-201ENST00000384209 138 ntBASIC2.14□□□□□ -2.07
PCDH1Q08174 RNU6-242P-201ENST00000384359 107 ntBASIC2.14□□□□□ -2.07
PCDH1Q08174 AL356320.1-201ENST00000429616 163 ntBASIC2.14□□□□□ -2.07
PCDH1Q08174 RPL39P39-201ENST00000455840 151 ntBASIC2.14□□□□□ -2.07
PCDH1Q08174 AC090255.1-201ENST00000495779 349 ntBASIC2.14□□□□□ -2.07
PCDH1Q08174 MIR4668-201ENST00000582284 70 ntBASIC2.14□□□□□ -2.07
PCDH1Q08174 MIR5002-201ENST00000584713 97 ntBASIC2.14□□□□□ -2.07
PCDH1Q08174 OR2L2-202ENST00000641771 4300 ntAPPRIS P1 BASIC2.14□□□□□ -2.07
PCDH1Q08174 ZNF658B-202ENST00000615961 3375 ntBASIC2.13□□□□□ -2.07
PCDH1Q08174 KNL1-204ENST00000527044 5404 ntTSL 5 BASIC2.13□□□□□ -2.07
PCDH1Q08174 SNORA25.3-201ENST00000363205 127 ntBASIC2.13□□□□□ -2.07
PCDH1Q08174 RNU6-949P-201ENST00000384040 107 ntBASIC2.13□□□□□ -2.07
PCDH1Q08174 MIR588-201ENST00000384900 83 ntBASIC2.13□□□□□ -2.07
PCDH1Q08174 HMGN2P38-201ENST00000423806 265 ntBASIC2.13□□□□□ -2.07
PCDH1Q08174 RNU6-267P-201ENST00000516714 103 ntBASIC2.13□□□□□ -2.07
PCDH1Q08174 MTND5P40-201ENST00000559945 246 ntBASIC2.13□□□□□ -2.07
PCDH1Q08174 AC012676.2-201ENST00000619258 186 ntBASIC2.13□□□□□ -2.07
PCDH1Q08174 TDRD15-202ENST00000622654 5805 ntAPPRIS P1 BASIC2.13□□□□□ -2.07
PCDH1Q08174 LRRCC1-202ENST00000414626 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC2.13□□□□□ -2.07
PCDH1Q08174 SAGE1-201ENST00000324447 2952 ntAPPRIS P2 TSL 5 BASIC2.12□□□□□ -2.07
PCDH1Q08174 Y_RNA.173-201ENST00000363776 113 ntBASIC2.12□□□□□ -2.07
PCDH1Q08174 RNU6-497P-201ENST00000365316 104 ntBASIC2.12□□□□□ -2.07
PCDH1Q08174 MIR221-201ENST00000385135 110 ntBASIC2.12□□□□□ -2.07
PCDH1Q08174 Y_RNA.620-201ENST00000411009 88 ntBASIC2.12□□□□□ -2.07
PCDH1Q08174 CGGBP1-202ENST00000398392 5298 ntAPPRIS P1 BASIC2.11□□□□□ -2.07
PCDH1Q08174 ZBBX-205ENST00000455345 3185 ntAPPRIS ALT2 TSL 1 (best) BASIC2.11□□□□□ -2.07
PCDH1Q08174 PYGO1-201ENST00000302000 8488 ntTSL 1 (best) BASIC2.11□□□□□ -2.07
PCDH1Q08174 RNU6-1276P-201ENST00000365372 104 ntBASIC2.11□□□□□ -2.07
PCDH1Q08174 RNY1P4-201ENST00000384595 115 ntBASIC2.11□□□□□ -2.07
PCDH1Q08174 RNU6ATAC37P-201ENST00000408328 131 ntBASIC2.11□□□□□ -2.07
PCDH1Q08174 RNU6ATAC42P-201ENST00000408637 95 ntBASIC2.11□□□□□ -2.07
PCDH1Q08174 RNU1-98P-201ENST00000458992 160 ntBASIC2.11□□□□□ -2.07
PCDH1Q08174 snoU13.26-201ENST00000459452 105 ntBASIC2.11□□□□□ -2.07
PCDH1Q08174 RNU6-947P-201ENST00000516264 106 ntBASIC2.11□□□□□ -2.07
PCDH1Q08174 RNU6-638P-201ENST00000516582 104 ntBASIC2.11□□□□□ -2.07
PCDH1Q08174 MIR4299-201ENST00000577899 72 ntBASIC2.11□□□□□ -2.07
PCDH1Q08174 MIR4264-201ENST00000583520 66 ntBASIC2.11□□□□□ -2.07
PCDH1Q08174 KIF20B-202ENST00000371728 6419 ntAPPRIS ALT2 TSL 1 (best) BASIC2.1□□□□□ -2.07
PCDH1Q08174 SI-201ENST00000264382 6011 ntAPPRIS P1 TSL 1 (best) BASIC2.1□□□□□ -2.07
PCDH1Q08174 RNY1P2-201ENST00000364820 117 ntBASIC2.1□□□□□ -2.07
PCDH1Q08174 MIR504-201ENST00000385065 83 ntBASIC2.1□□□□□ -2.07
PCDH1Q08174 MIR563-201ENST00000385080 79 ntBASIC2.1□□□□□ -2.07
PCDH1Q08174 snoU13.25-201ENST00000458945 104 ntBASIC2.1□□□□□ -2.07
PCDH1Q08174 RPS27P21-201ENST00000486977 252 ntBASIC2.1□□□□□ -2.07
PCDH1Q08174 RPS29P11-201ENST00000496507 171 ntBASIC2.1□□□□□ -2.07
PCDH1Q08174 MIR2115-201ENST00000516657 100 ntBASIC2.1□□□□□ -2.07
PCDH1Q08174 MIR4524B-201ENST00000581569 115 ntBASIC2.1□□□□□ -2.07
PCDH1Q08174 AP000753.3-201ENST00000604083 169 ntBASIC2.1□□□□□ -2.07
PCDH1Q08174 ZNFX1-AS1_2.1-201ENST00000610973 93 ntBASIC2.1□□□□□ -2.07
PCDH1Q08174 MIR6740-201ENST00000618268 113 ntBASIC2.1□□□□□ -2.07
PCDH1Q08174 MIR8063-201ENST00000621930 81 ntBASIC2.1□□□□□ -2.07
PCDH1Q08174 MIR3202-2-201ENST00000635980 79 ntBASIC2.1□□□□□ -2.07
PCDH1Q08174 AP000553.5-201ENST00000641933 54 ntBASIC2.1□□□□□ -2.07
PCDH1Q08174 HSBP1P2-201ENST00000299671 229 ntBASIC2.09□□□□□ -2.07
PCDH1Q08174 RNU6-979P-201ENST00000383896 107 ntBASIC2.09□□□□□ -2.07
PCDH1Q08174 MIR5588-201ENST00000581890 63 ntBASIC2.09□□□□□ -2.07
PCDH1Q08174 MIR6132-201ENST00000622083 109 ntBASIC2.09□□□□□ -2.07
PCDH1Q08174 SCN7A-201ENST00000409855 7183 ntAPPRIS P1 TSL 1 (best) BASIC2.09□□□□□ -2.07
PCDH1Q08174 AC008163.1-205ENST00000413944 4649 ntTSL 1 (best) BASIC2.09□□□□□ -2.07
PCDH1Q08174 MIER3-204ENST00000381226 5210 ntAPPRIS ALT1 TSL 1 (best) BASIC2.08□□□□□ -2.08
PCDH1Q08174 RNU6-228P-201ENST00000362700 106 ntBASIC2.08□□□□□ -2.08
PCDH1Q08174 RNU6-1124P-201ENST00000384169 107 ntBASIC2.08□□□□□ -2.08
PCDH1Q08174 MT-TN-201ENST00000387400 73 ntBASIC2.08□□□□□ -2.08
PCDH1Q08174 Y_RNA.609-201ENST00000410669 89 ntBASIC2.08□□□□□ -2.08
PCDH1Q08174 RN7SL274P-201ENST00000492268 272 ntBASIC2.08□□□□□ -2.08
PCDH1Q08174 RNU1-41P-201ENST00000516161 162 ntBASIC2.08□□□□□ -2.08
PCDH1Q08174 RNU1-48P-201ENST00000516400 162 ntBASIC2.08□□□□□ -2.08
PCDH1Q08174 MIR4769-201ENST00000584126 77 ntBASIC2.08□□□□□ -2.08
PCDH1Q08174 SNORA4-201ENST00000584302 138 ntBASIC2.08□□□□□ -2.08
PCDH1Q08174 ZNF355P-201ENST00000427301 3216 ntBASIC2.08□□□□□ -2.08
PCDH1Q08174 RNU6-1125P-201ENST00000363601 107 ntBASIC2.07□□□□□ -2.08
PCDH1Q08174 RNU6-480P-201ENST00000384332 107 ntBASIC2.07□□□□□ -2.08
PCDH1Q08174 MIR17-201ENST00000385012 84 ntBASIC2.07□□□□□ -2.08
PCDH1Q08174 RNU6-205P-201ENST00000390858 107 ntBASIC2.07□□□□□ -2.08
PCDH1Q08174 SNORA3.2-201ENST00000408221 125 ntBASIC2.07□□□□□ -2.08
PCDH1Q08174 Z98742.3-201ENST00000418637 326 ntBASIC2.07□□□□□ -2.08
PCDH1Q08174 AL133373.1-201ENST00000497098 94 ntBASIC2.07□□□□□ -2.08
PCDH1Q08174 MIR514B-201ENST00000516774 80 ntBASIC2.07□□□□□ -2.08
PCDH1Q08174 AP003716.2-201ENST00000528260 108 ntBASIC2.07□□□□□ -2.08
PCDH1Q08174 MIR4448-201ENST00000584360 86 ntBASIC2.07□□□□□ -2.08
PCDH1Q08174 AC103810.8-201ENST00000607347 118 ntBASIC2.07□□□□□ -2.08
PCDH1Q08174 OXR1-209ENST00000517566 4501 ntTSL 1 (best) BASIC2.06□□□□□ -2.08
PCDH1Q08174 MIR30D-201ENST00000362283 70 ntBASIC2.06□□□□□ -2.08
PCDH1Q08174 Y_RNA.168-201ENST00000363740 102 ntBASIC2.06□□□□□ -2.08
PCDH1Q08174 SNORA2B-201ENST00000384583 137 ntBASIC2.06□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 108.4 ms