Protein–RNA interactions for Protein: P56199

ITGA1, Integrin alpha-1, humanhuman

Predictions only

Length 1,179 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA1P56199 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC1.87□□□□□ -2.11
ITGA1P56199 SUMO2P12-201ENST00000405924 140 ntBASIC1.87□□□□□ -2.11
ITGA1P56199 RNU6-1086P-201ENST00000410930 100 ntBASIC1.87□□□□□ -2.11
ITGA1P56199 RNA5SP182-201ENST00000516064 82 ntBASIC1.87□□□□□ -2.11
ITGA1P56199 MIR4299-201ENST00000577899 72 ntBASIC1.87□□□□□ -2.11
ITGA1P56199 SNORD38B-201ENST00000384690 67 ntBASIC1.86□□□□□ -2.11
ITGA1P56199 SNORA40.18-201ENST00000391200 128 ntBASIC1.86□□□□□ -2.11
ITGA1P56199 AL445685.2-201ENST00000422551 342 ntBASIC1.86□□□□□ -2.11
ITGA1P56199 AC009474.2-201ENST00000451383 136 ntBASIC1.86□□□□□ -2.11
ITGA1P56199 RNU7-79P-201ENST00000516082 62 ntBASIC1.86□□□□□ -2.11
ITGA1P56199 RNU6-162P-201ENST00000516228 103 ntBASIC1.86□□□□□ -2.11
ITGA1P56199 RNU6-922P-201ENST00000516753 99 ntBASIC1.86□□□□□ -2.11
ITGA1P56199 MIR5089-201ENST00000580047 84 ntBASIC1.86□□□□□ -2.11
ITGA1P56199 TRAJ36-201ENST00000614481 58 ntAPPRIS P1 BASIC1.86□□□□□ -2.11
ITGA1P56199 SNORD38B-202ENST00000625943 69 ntBASIC1.86□□□□□ -2.11
ITGA1P56199 MIR450A2-201ENST00000385022 100 ntBASIC1.85□□□□□ -2.11
ITGA1P56199 TRAJ11-201ENST00000390526 60 ntAPPRIS P1 BASIC1.85□□□□□ -2.11
ITGA1P56199 RNU6-1307P-201ENST00000391012 103 ntBASIC1.85□□□□□ -2.11
ITGA1P56199 RNU6ATAC41P-201ENST00000408600 126 ntBASIC1.85□□□□□ -2.11
ITGA1P56199 RPL31P63-201ENST00000422565 375 ntBASIC1.85□□□□□ -2.11
ITGA1P56199 UBL5P1-201ENST00000507979 193 ntBASIC1.85□□□□□ -2.11
ITGA1P56199 RN7SKP12-201ENST00000516275 143 ntBASIC1.85□□□□□ -2.11
ITGA1P56199 SNORD67.1-201ENST00000516618 108 ntBASIC1.85□□□□□ -2.11
ITGA1P56199 AC022254.1-201ENST00000567857 235 ntBASIC1.85□□□□□ -2.11
ITGA1P56199 MIR4498-201ENST00000577599 66 ntBASIC1.85□□□□□ -2.11
ITGA1P56199 PNRC2-204ENST00000579103 171 ntTSL 2 BASIC1.85□□□□□ -2.11
ITGA1P56199 SNRPGP19-201ENST00000603826 189 ntBASIC1.85□□□□□ -2.11
ITGA1P56199 MIR376B-201ENST00000614515 100 ntBASIC1.85□□□□□ -2.11
ITGA1P56199 hsa-mir-3158-1.1-201ENST00000637571 81 ntBASIC1.85□□□□□ -2.11
ITGA1P56199 Y_RNA.467-201ENST00000384297 102 ntBASIC1.84□□□□□ -2.11
ITGA1P56199 RNU6-1053P-201ENST00000515930 101 ntBASIC1.84□□□□□ -2.11
ITGA1P56199 Y_RNA.705-201ENST00000516862 110 ntBASIC1.84□□□□□ -2.11
ITGA1P56199 MIR4439-201ENST00000583746 80 ntBASIC1.84□□□□□ -2.11
ITGA1P56199 PYGO1-201ENST00000302000 8488 ntTSL 1 (best) BASIC1.84□□□□□ -2.12
ITGA1P56199 Y_RNA.247-201ENST00000364500 92 ntBASIC1.83□□□□□ -2.12
ITGA1P56199 Y_RNA.448-201ENST00000384185 108 ntBASIC1.83□□□□□ -2.12
ITGA1P56199 BTF3P4-201ENST00000418852 495 ntBASIC1.83□□□□□ -2.12
ITGA1P56199 RNU6ATAC17P-201ENST00000516074 71 ntBASIC1.83□□□□□ -2.12
ITGA1P56199 RNU7-137P-201ENST00000516788 62 ntBASIC1.83□□□□□ -2.12
ITGA1P56199 RNU6-1006P-201ENST00000516998 103 ntBASIC1.83□□□□□ -2.12
ITGA1P56199 AC024614.2-201ENST00000577584 372 ntBASIC1.83□□□□□ -2.12
ITGA1P56199 AC015688.6-201ENST00000577737 104 ntBASIC1.83□□□□□ -2.12
ITGA1P56199 MIR4713-201ENST00000582691 75 ntBASIC1.83□□□□□ -2.12
ITGA1P56199 AL357312.1-201ENST00000603879 298 ntBASIC1.83□□□□□ -2.12
ITGA1P56199 AC008781.2-201ENST00000502205 2480 ntTSL 1 (best) BASIC1.83□□□□□ -2.12
ITGA1P56199 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC1.82□□□□□ -2.12
ITGA1P56199 SNORD114-10-201ENST00000363409 72 ntBASIC1.82□□□□□ -2.12
ITGA1P56199 SNORD38.1-201ENST00000363863 68 ntBASIC1.82□□□□□ -2.12
ITGA1P56199 RNU6-865P-201ENST00000364772 107 ntBASIC1.82□□□□□ -2.12
ITGA1P56199 RNU6-820P-201ENST00000384273 107 ntBASIC1.82□□□□□ -2.12
ITGA1P56199 RNU6-1237P-201ENST00000384777 107 ntBASIC1.82□□□□□ -2.12
ITGA1P56199 MIR34C-201ENST00000384831 77 ntBASIC1.82□□□□□ -2.12
ITGA1P56199 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC1.82□□□□□ -2.12
ITGA1P56199 RNU6-887P-201ENST00000410660 100 ntBASIC1.82□□□□□ -2.12
ITGA1P56199 RNA5SP489-201ENST00000410986 109 ntBASIC1.82□□□□□ -2.12
ITGA1P56199 RPS29P28-201ENST00000446439 141 ntBASIC1.82□□□□□ -2.12
ITGA1P56199 SNORA77B-201ENST00000578179 125 ntBASIC1.82□□□□□ -2.12
ITGA1P56199 MIR3192-201ENST00000584920 77 ntBASIC1.82□□□□□ -2.12
ITGA1P56199 AP001109.1-201ENST00000587114 279 ntTSL 3 BASIC1.82□□□□□ -2.12
ITGA1P56199 ST7-OT3_3.1-201ENST00000611709 115 ntBASIC1.82□□□□□ -2.12
ITGA1P56199 C16orf97-206ENST00000622950 415 ntTSL 2 BASIC1.82□□□□□ -2.12
ITGA1P56199 NFIA-AS1-206ENST00000630199 220 ntTSL 5 BASIC1.82□□□□□ -2.12
ITGA1P56199 RNU6-1321P-201ENST00000390905 107 ntBASIC1.81□□□□□ -2.12
ITGA1P56199 RNU6-972P-201ENST00000391208 107 ntBASIC1.81□□□□□ -2.12
ITGA1P56199 Y_RNA.593-201ENST00000410292 98 ntBASIC1.81□□□□□ -2.12
ITGA1P56199 RNA5SP237-201ENST00000410414 113 ntBASIC1.81□□□□□ -2.12
ITGA1P56199 ATP6V0E1P3-201ENST00000420036 246 ntBASIC1.81□□□□□ -2.12
ITGA1P56199 AC108667.1-201ENST00000428618 249 ntBASIC1.81□□□□□ -2.12
ITGA1P56199 AC109327.2-201ENST00000448339 378 ntBASIC1.81□□□□□ -2.12
ITGA1P56199 RNA5SP445-201ENST00000515889 115 ntBASIC1.81□□□□□ -2.12
ITGA1P56199 RNU6-250P-201ENST00000516958 103 ntBASIC1.81□□□□□ -2.12
ITGA1P56199 AL096861.1-201ENST00000610899 123 ntBASIC1.81□□□□□ -2.12
ITGA1P56199 AC105081.1-201ENST00000617727 106 ntBASIC1.81□□□□□ -2.12
ITGA1P56199 MIR494-201ENST00000349529 81 ntBASIC1.8□□□□□ -2.12
ITGA1P56199 Y_RNA.17-201ENST00000362433 111 ntBASIC1.8□□□□□ -2.12
ITGA1P56199 RNY1P13-201ENST00000365030 105 ntBASIC1.8□□□□□ -2.12
ITGA1P56199 RNU6-447P-201ENST00000410293 104 ntBASIC1.8□□□□□ -2.12
ITGA1P56199 RNU6-1118P-201ENST00000410382 104 ntBASIC1.8□□□□□ -2.12
ITGA1P56199 RNU6-1076P-201ENST00000410397 104 ntBASIC1.8□□□□□ -2.12
ITGA1P56199 RNU6-355P-201ENST00000410427 104 ntBASIC1.8□□□□□ -2.12
ITGA1P56199 RNU6-791P-201ENST00000410467 104 ntBASIC1.8□□□□□ -2.12
ITGA1P56199 RNU6-705P-201ENST00000410601 104 ntBASIC1.8□□□□□ -2.12
ITGA1P56199 RNU6-1100P-201ENST00000410691 104 ntBASIC1.8□□□□□ -2.12
ITGA1P56199 RNU6-860P-201ENST00000410860 104 ntBASIC1.8□□□□□ -2.12
ITGA1P56199 RNU6-1217P-201ENST00000411276 104 ntBASIC1.8□□□□□ -2.12
ITGA1P56199 RNU6-785P-201ENST00000411324 104 ntBASIC1.8□□□□□ -2.12
ITGA1P56199 AC003989.2-201ENST00000440224 169 ntBASIC1.8□□□□□ -2.12
ITGA1P56199 GHRLOS.1-201ENST00000610995 70 ntBASIC1.8□□□□□ -2.12
ITGA1P56199 U6.90-201ENST00000614007 104 ntBASIC1.8□□□□□ -2.12
ITGA1P56199 MIR8074-201ENST00000615081 81 ntBASIC1.8□□□□□ -2.12
ITGA1P56199 U6.70-201ENST00000620287 104 ntBASIC1.8□□□□□ -2.12
ITGA1P56199 RNA5SP173-201ENST00000364857 136 ntBASIC1.79□□□□□ -2.12
ITGA1P56199 RNU6-813P-201ENST00000384691 107 ntBASIC1.79□□□□□ -2.12
ITGA1P56199 HSPE1P24-201ENST00000450782 238 ntBASIC1.79□□□□□ -2.12
ITGA1P56199 RNU7-48P-201ENST00000458875 63 ntBASIC1.79□□□□□ -2.12
ITGA1P56199 AC141846.1-201ENST00000568348 142 ntBASIC1.79□□□□□ -2.12
ITGA1P56199 PRELID3BP2-201ENST00000605362 201 ntBASIC1.79□□□□□ -2.12
ITGA1P56199 FAM13A-AS1_1.1-201ENST00000612555 119 ntBASIC1.79□□□□□ -2.12
ITGA1P56199 AL662814.1-201ENST00000617364 121 ntBASIC1.79□□□□□ -2.12
ITGA1P56199 WWP1P1-201ENST00000466609 2769 ntBASIC1.78□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 142.9 ms