Protein–RNA interactions for Protein: P51956

NEK3, Serine/threonine-protein kinase Nek3, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3P51956 RNU6-1086P-201ENST00000410930 100 ntBASIC0.84□□□□□ -2.27
NEK3P51956 RNU6-351P-201ENST00000516097 100 ntBASIC0.84□□□□□ -2.27
NEK3P51956 AC141846.1-201ENST00000568348 142 ntBASIC0.84□□□□□ -2.27
NEK3P51956 RNU6ATAC31P-201ENST00000408513 126 ntBASIC0.83□□□□□ -2.28
NEK3P51956 RNU6-588P-201ENST00000410281 105 ntBASIC0.83□□□□□ -2.28
NEK3P51956 RNU7-156P-201ENST00000517214 74 ntBASIC0.83□□□□□ -2.28
NEK3P51956 AC107958.3-201ENST00000553410 431 ntTSL 3 BASIC0.83□□□□□ -2.28
NEK3P51956 AC013244.2-201ENST00000603396 103 ntBASIC0.83□□□□□ -2.28
NEK3P51956 MIR7111-201ENST00000619751 72 ntBASIC0.83□□□□□ -2.28
NEK3P51956 SNORD115-2-201ENST00000362842 82 ntBASIC0.82□□□□□ -2.28
NEK3P51956 Y_RNA.272-201ENST00000364696 102 ntBASIC0.82□□□□□ -2.28
NEK3P51956 RNU4-16P-201ENST00000364737 141 ntBASIC0.82□□□□□ -2.28
NEK3P51956 SNORD115-20-201ENST00000365099 82 ntBASIC0.82□□□□□ -2.28
NEK3P51956 CYP3A137P-201ENST00000562436 69 ntBASIC0.82□□□□□ -2.28
NEK3P51956 AC090897.1-201ENST00000580909 226 ntBASIC0.82□□□□□ -2.28
NEK3P51956 HOTAIRM1_4.1-201ENST00000617934 102 ntBASIC0.82□□□□□ -2.28
NEK3P51956 TEX15-201ENST00000256246 10110 ntTSL 1 (best) BASIC0.82□□□□□ -2.28
NEK3P51956 Y_RNA.120-201ENST00000363304 110 ntBASIC0.81□□□□□ -2.28
NEK3P51956 RNU6-690P-201ENST00000365242 106 ntBASIC0.81□□□□□ -2.28
NEK3P51956 RNU6-949P-201ENST00000384040 107 ntBASIC0.81□□□□□ -2.28
NEK3P51956 Y_RNA.584-201ENST00000391090 114 ntBASIC0.81□□□□□ -2.28
NEK3P51956 RNU6ATAC27P-201ENST00000408289 119 ntBASIC0.81□□□□□ -2.28
NEK3P51956 SNORD93-201ENST00000408813 74 ntBASIC0.81□□□□□ -2.28
NEK3P51956 AC004941.2-201ENST00000427009 228 ntBASIC0.81□□□□□ -2.28
NEK3P51956 AC015818.7-201ENST00000428754 109 ntBASIC0.81□□□□□ -2.28
NEK3P51956 AC087499.7-201ENST00000441958 109 ntBASIC0.81□□□□□ -2.28
NEK3P51956 SNORA18-201ENST00000384416 132 ntBASIC0.8□□□□□ -2.28
NEK3P51956 RNU6-1237P-201ENST00000384777 107 ntBASIC0.8□□□□□ -2.28
NEK3P51956 RNU6ATAC42P-201ENST00000408637 95 ntBASIC0.8□□□□□ -2.28
NEK3P51956 MTND5P15-201ENST00000434246 349 ntBASIC0.8□□□□□ -2.28
NEK3P51956 RNU7-102P-201ENST00000458948 62 ntBASIC0.8□□□□□ -2.28
NEK3P51956 AC022709.1-201ENST00000615967 87 ntBASIC0.8□□□□□ -2.28
NEK3P51956 MIR489-201ENST00000384923 84 ntBASIC0.79□□□□□ -2.28
NEK3P51956 SNORD100-201ENST00000408573 76 ntBASIC0.79□□□□□ -2.28
NEK3P51956 RNA5SP222-201ENST00000411039 105 ntBASIC0.79□□□□□ -2.28
NEK3P51956 RNU7-113P-201ENST00000459273 62 ntBASIC0.79□□□□□ -2.28
NEK3P51956 AP003327.1-201ENST00000529684 127 ntBASIC0.79□□□□□ -2.28
NEK3P51956 CLRN1-AS1.1-201ENST00000615643 79 ntBASIC0.79□□□□□ -2.28
NEK3P51956 TRAJ22-201ENST00000390515 63 ntAPPRIS P1 BASIC0.78□□□□□ -2.28
NEK3P51956 Y_RNA.580-201ENST00000391004 95 ntBASIC0.78□□□□□ -2.28
NEK3P51956 AL603914.1-201ENST00000401964 204 ntBASIC0.78□□□□□ -2.28
NEK3P51956 RNU4-83P-201ENST00000410863 133 ntBASIC0.78□□□□□ -2.28
NEK3P51956 AL606490.4-201ENST00000423117 127 ntBASIC0.78□□□□□ -2.28
NEK3P51956 AC112693.2-201ENST00000556538 232 ntBASIC0.78□□□□□ -2.28
NEK3P51956 MIR4305-201ENST00000583252 102 ntBASIC0.78□□□□□ -2.28
NEK3P51956 MIR6866-201ENST00000638146 69 ntBASIC0.78□□□□□ -2.28
NEK3P51956 RNU6-794P-201ENST00000517261 64 ntBASIC0.77□□□□□ -2.29
NEK3P51956 AC018659.1-201ENST00000551083 169 ntBASIC0.77□□□□□ -2.29
NEK3P51956 AC133485.4-201ENST00000561835 220 ntBASIC0.77□□□□□ -2.29
NEK3P51956 AC138907.4-201ENST00000570107 226 ntBASIC0.77□□□□□ -2.29
NEK3P51956 MIR5000-201ENST00000577717 103 ntBASIC0.77□□□□□ -2.29
NEK3P51956 MIR3612-201ENST00000579753 87 ntBASIC0.77□□□□□ -2.29
NEK3P51956 AL590095.2-201ENST00000604136 117 ntBASIC0.77□□□□□ -2.29
NEK3P51956 MIR3658-201ENST00000636291 56 ntBASIC0.77□□□□□ -2.29
NEK3P51956 Y_RNA.251-201ENST00000364551 99 ntBASIC0.76□□□□□ -2.29
NEK3P51956 RNU6-1258P-201ENST00000516911 111 ntBASIC0.76□□□□□ -2.29
NEK3P51956 RNU6-765P-201ENST00000516916 99 ntBASIC0.76□□□□□ -2.29
NEK3P51956 RNU6-448P-201ENST00000517052 107 ntBASIC0.76□□□□□ -2.29
NEK3P51956 RNU7-35P-201ENST00000517174 62 ntBASIC0.76□□□□□ -2.29
NEK3P51956 RNU2-60P-201ENST00000517290 128 ntBASIC0.76□□□□□ -2.29
NEK3P51956 IGHVII-40-1-201ENST00000517316 58 ntBASIC0.76□□□□□ -2.29
NEK3P51956 ZNF518A-209ENST00000614149 7911 ntAPPRIS P1 TSL 5 BASIC0.75□□□□□ -2.29
NEK3P51956 MIR18A-201ENST00000362310 71 ntBASIC0.75□□□□□ -2.29
NEK3P51956 Y_RNA.171-201ENST00000363760 102 ntBASIC0.75□□□□□ -2.29
NEK3P51956 RNU6-449P-201ENST00000383914 107 ntBASIC0.75□□□□□ -2.29
NEK3P51956 U8.15-201ENST00000390947 134 ntBASIC0.75□□□□□ -2.29
NEK3P51956 MIR6515-201ENST00000619843 57 ntBASIC0.75□□□□□ -2.29
NEK3P51956 Y_RNA.42-201ENST00000362660 108 ntBASIC0.74□□□□□ -2.29
NEK3P51956 RNY1P13-201ENST00000365030 105 ntBASIC0.74□□□□□ -2.29
NEK3P51956 RNU6-342P-201ENST00000384521 104 ntBASIC0.74□□□□□ -2.29
NEK3P51956 MIR613-201ENST00000385248 95 ntBASIC0.74□□□□□ -2.29
NEK3P51956 MIR140-201ENST00000385282 100 ntBASIC0.74□□□□□ -2.29
NEK3P51956 CPEB3_ribozyme.1-201ENST00000408115 78 ntBASIC0.74□□□□□ -2.29
NEK3P51956 AC002350.1-201ENST00000490759 375 ntBASIC0.74□□□□□ -2.29
NEK3P51956 RNA5SP33-201ENST00000516687 98 ntBASIC0.74□□□□□ -2.29
NEK3P51956 AC133485.1-201ENST00000567176 124 ntBASIC0.74□□□□□ -2.29
NEK3P51956 AC138907.6-201ENST00000568401 126 ntBASIC0.74□□□□□ -2.29
NEK3P51956 MIR6835-201ENST00000621552 64 ntBASIC0.74□□□□□ -2.29
NEK3P51956 Y_RNA.299-201ENST00000364973 94 ntBASIC0.73□□□□□ -2.29
NEK3P51956 SNORA36.2-201ENST00000384004 127 ntBASIC0.73□□□□□ -2.29
NEK3P51956 Y_RNA.531-201ENST00000384589 121 ntBASIC0.73□□□□□ -2.29
NEK3P51956 RNU6-394P-201ENST00000410735 107 ntBASIC0.73□□□□□ -2.29
NEK3P51956 RNU7-79P-201ENST00000516082 62 ntBASIC0.73□□□□□ -2.29
NEK3P51956 RNA5SP121-201ENST00000516537 101 ntBASIC0.73□□□□□ -2.29
NEK3P51956 Y_RNA.690-201ENST00000516603 95 ntBASIC0.73□□□□□ -2.29
NEK3P51956 AC004812.1-201ENST00000540773 146 ntBASIC0.73□□□□□ -2.29
NEK3P51956 MIR4714-201ENST00000580728 77 ntBASIC0.73□□□□□ -2.29
NEK3P51956 AC008608.1-201ENST00000603910 127 ntBASIC0.73□□□□□ -2.29
NEK3P51956 AC021443.1-201ENST00000604478 211 ntBASIC0.73□□□□□ -2.29
NEK3P51956 MIR8066-201ENST00000617280 78 ntBASIC0.73□□□□□ -2.29
NEK3P51956 FTX_2.1-201ENST00000618816 94 ntBASIC0.73□□□□□ -2.29
NEK3P51956 Y_RNA.778-201ENST00000620203 90 ntBASIC0.73□□□□□ -2.29
NEK3P51956 RNU4-11P-201ENST00000365287 132 ntBASIC0.72□□□□□ -2.29
NEK3P51956 RNA5SP117-201ENST00000365294 118 ntBASIC0.72□□□□□ -2.29
NEK3P51956 MIR508-201ENST00000384857 115 ntBASIC0.72□□□□□ -2.29
NEK3P51956 AL162399.1-201ENST00000426090 130 ntTSL 3 BASIC0.72□□□□□ -2.29
NEK3P51956 RNU6-240P-201ENST00000516098 97 ntBASIC0.72□□□□□ -2.29
NEK3P51956 MIR6082-201ENST00000613604 109 ntBASIC0.72□□□□□ -2.29
NEK3P51956 Y_RNA.270-201ENST00000364693 104 ntBASIC0.71□□□□□ -2.3
NEK3P51956 MIR598-201ENST00000384868 97 ntBASIC0.71□□□□□ -2.3
Retrieved 100 of 98,524 protein–RNA pairs in 202.5 ms