Protein–RNA interactions for Protein: P22670

RFX1, MHC class II regulatory factor RFX1, humanhuman

Predictions only

Length 979 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX1P22670 MIR676-201ENST00000390702 67 ntBASIC2.32□□□□□ -2.04
RFX1P22670 AL365434.1-201ENST00000412362 380 ntTSL 3 BASIC2.32□□□□□ -2.04
RFX1P22670 MTATP8P2-201ENST00000435212 202 ntBASIC2.32□□□□□ -2.04
RFX1P22670 snoU13.2-201ENST00000459201 104 ntBASIC2.32□□□□□ -2.04
RFX1P22670 SNORD67.1-201ENST00000516618 108 ntBASIC2.32□□□□□ -2.04
RFX1P22670 MIR4264-201ENST00000583520 66 ntBASIC2.32□□□□□ -2.04
RFX1P22670 MIR219B-201ENST00000637023 88 ntBASIC2.32□□□□□ -2.04
RFX1P22670 AL512310.12-203ENST00000640543 90 ntBASIC2.32□□□□□ -2.04
RFX1P22670 Y_RNA.377-201ENST00000365644 108 ntBASIC2.31□□□□□ -2.04
RFX1P22670 RNY4P29-201ENST00000410801 97 ntBASIC2.31□□□□□ -2.04
RFX1P22670 RNA5SP489-201ENST00000410986 109 ntBASIC2.31□□□□□ -2.04
RFX1P22670 RNU6-1054P-201ENST00000411293 104 ntBASIC2.31□□□□□ -2.04
RFX1P22670 TTTY16-201ENST00000437686 192 ntTSL 1 (best) BASIC2.31□□□□□ -2.04
RFX1P22670 RNU6-1053P-201ENST00000515930 101 ntBASIC2.31□□□□□ -2.04
RFX1P22670 RNU6-762P-201ENST00000517107 102 ntBASIC2.31□□□□□ -2.04
RFX1P22670 RNU6-165P-201ENST00000517170 99 ntBASIC2.31□□□□□ -2.04
RFX1P22670 AC068733.3-201ENST00000632757 269 ntTSL 3 BASIC2.31□□□□□ -2.04
RFX1P22670 MIR2052-201ENST00000636055 55 ntBASIC2.31□□□□□ -2.04
RFX1P22670 MUC15-203ENST00000455601 3156 ntAPPRIS P1 TSL 2 BASIC2.31□□□□□ -2.04
RFX1P22670 SYT14-201ENST00000367015 5094 ntAPPRIS ALT2 TSL 1 (best) BASIC2.3□□□□□ -2.04
RFX1P22670 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC2.3□□□□□ -2.04
RFX1P22670 LCORL-202ENST00000382224 4984 ntAPPRIS ALT2 TSL 5 BASIC2.3□□□□□ -2.04
RFX1P22670 RNU6-1313P-201ENST00000362622 102 ntBASIC2.3□□□□□ -2.04
RFX1P22670 SNORD114-10-201ENST00000363409 72 ntBASIC2.3□□□□□ -2.04
RFX1P22670 RNY1P13-201ENST00000365030 105 ntBASIC2.3□□□□□ -2.04
RFX1P22670 Y_RNA.388-201ENST00000383919 113 ntBASIC2.3□□□□□ -2.04
RFX1P22670 RNU6-1201P-201ENST00000384227 107 ntBASIC2.3□□□□□ -2.04
RFX1P22670 Y_RNA.558-201ENST00000384685 113 ntBASIC2.3□□□□□ -2.04
RFX1P22670 MIR583-201ENST00000384846 75 ntBASIC2.3□□□□□ -2.04
RFX1P22670 MIR563-201ENST00000385080 79 ntBASIC2.3□□□□□ -2.04
RFX1P22670 MIR1185-1-201ENST00000408598 86 ntBASIC2.3□□□□□ -2.04
RFX1P22670 RNU6ATAC41P-201ENST00000408600 126 ntBASIC2.3□□□□□ -2.04
RFX1P22670 RNA5SP237-201ENST00000410414 113 ntBASIC2.3□□□□□ -2.04
RFX1P22670 AC025033.1-201ENST00000463883 194 ntBASIC2.3□□□□□ -2.04
RFX1P22670 MIR5002-201ENST00000584713 97 ntBASIC2.3□□□□□ -2.04
RFX1P22670 AP000753.3-201ENST00000604083 169 ntBASIC2.3□□□□□ -2.04
RFX1P22670 OR2L2-202ENST00000641771 4300 ntAPPRIS P1 BASIC2.3□□□□□ -2.04
RFX1P22670 FSD1L-201ENST00000374707 7062 ntTSL 1 (best) BASIC2.3□□□□□ -2.04
RFX1P22670 MIR377-201ENST00000362145 69 ntBASIC2.29□□□□□ -2.04
RFX1P22670 RNY1P7-201ENST00000384743 110 ntBASIC2.29□□□□□ -2.04
RFX1P22670 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC2.29□□□□□ -2.04
RFX1P22670 SNORA26.2-201ENST00000390922 122 ntBASIC2.29□□□□□ -2.04
RFX1P22670 RNU6-447P-201ENST00000410293 104 ntBASIC2.29□□□□□ -2.04
RFX1P22670 RNU6-1118P-201ENST00000410382 104 ntBASIC2.29□□□□□ -2.04
RFX1P22670 RNU6-1076P-201ENST00000410397 104 ntBASIC2.29□□□□□ -2.04
RFX1P22670 RNU6-613P-201ENST00000410412 108 ntBASIC2.29□□□□□ -2.04
RFX1P22670 RNU6-355P-201ENST00000410427 104 ntBASIC2.29□□□□□ -2.04
RFX1P22670 RNU6-791P-201ENST00000410467 104 ntBASIC2.29□□□□□ -2.04
RFX1P22670 RNU6-705P-201ENST00000410601 104 ntBASIC2.29□□□□□ -2.04
RFX1P22670 RNU6-1100P-201ENST00000410691 104 ntBASIC2.29□□□□□ -2.04
RFX1P22670 RNU6-860P-201ENST00000410860 104 ntBASIC2.29□□□□□ -2.04
RFX1P22670 RNU6-1217P-201ENST00000411276 104 ntBASIC2.29□□□□□ -2.04
RFX1P22670 RNU6-785P-201ENST00000411324 104 ntBASIC2.29□□□□□ -2.04
RFX1P22670 AC090255.1-201ENST00000495779 349 ntBASIC2.29□□□□□ -2.04
RFX1P22670 RNU7-137P-201ENST00000516788 62 ntBASIC2.29□□□□□ -2.04
RFX1P22670 AC141846.1-201ENST00000568348 142 ntBASIC2.29□□□□□ -2.04
RFX1P22670 U6.90-201ENST00000614007 104 ntBASIC2.29□□□□□ -2.04
RFX1P22670 AL442128.1-201ENST00000615151 90 ntBASIC2.29□□□□□ -2.04
RFX1P22670 AL662814.1-201ENST00000617364 121 ntBASIC2.29□□□□□ -2.04
RFX1P22670 U6.70-201ENST00000620287 104 ntBASIC2.29□□□□□ -2.04
RFX1P22670 TEX15-203ENST00000638951 11341 ntAPPRIS P1 TSL 5 BASIC2.28□□□□□ -2.04
RFX1P22670 Y_RNA.466-201ENST00000384294 113 ntBASIC2.28□□□□□ -2.04
RFX1P22670 MIR588-201ENST00000384900 83 ntBASIC2.28□□□□□ -2.04
RFX1P22670 RNU6-1307P-201ENST00000391012 103 ntBASIC2.28□□□□□ -2.04
RFX1P22670 MIR6516-201ENST00000630554 81 ntBASIC2.28□□□□□ -2.04
RFX1P22670 Y_RNA.107-201ENST00000363190 121 ntBASIC2.27□□□□□ -2.05
RFX1P22670 UBL5P1-201ENST00000507979 193 ntBASIC2.27□□□□□ -2.05
RFX1P22670 RNU6-902P-201ENST00000517212 91 ntBASIC2.27□□□□□ -2.05
RFX1P22670 KTN1-205ENST00000395314 4618 ntAPPRIS P4 TSL 1 (best) BASIC2.27□□□□□ -2.05
RFX1P22670 MIR103A2-201ENST00000362154 78 ntBASIC2.26□□□□□ -2.05
RFX1P22670 Y_RNA.220-201ENST00000364244 109 ntBASIC2.26□□□□□ -2.05
RFX1P22670 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC2.26□□□□□ -2.05
RFX1P22670 RNU6ATAC38P-201ENST00000408119 126 ntBASIC2.26□□□□□ -2.05
RFX1P22670 RPS27P16-201ENST00000425758 201 ntBASIC2.26□□□□□ -2.05
RFX1P22670 AC105081.1-201ENST00000617727 106 ntBASIC2.26□□□□□ -2.05
RFX1P22670 Y_RNA.226-201ENST00000364337 114 ntBASIC2.25□□□□□ -2.05
RFX1P22670 RNU6-580P-201ENST00000365159 107 ntBASIC2.25□□□□□ -2.05
RFX1P22670 Y_RNA.448-201ENST00000384185 108 ntBASIC2.25□□□□□ -2.05
RFX1P22670 RNU6-1321P-201ENST00000390905 107 ntBASIC2.25□□□□□ -2.05
RFX1P22670 SNORA26.9-201ENST00000391322 122 ntBASIC2.25□□□□□ -2.05
RFX1P22670 RNU6-717P-201ENST00000459076 104 ntBASIC2.25□□□□□ -2.05
RFX1P22670 RNU1-40P-201ENST00000516816 164 ntBASIC2.25□□□□□ -2.05
RFX1P22670 RNU1-97P-201ENST00000516872 164 ntBASIC2.25□□□□□ -2.05
RFX1P22670 AC024382.1-201ENST00000520224 292 ntTSL 3 BASIC2.25□□□□□ -2.05
RFX1P22670 MIR6740-201ENST00000618268 113 ntBASIC2.25□□□□□ -2.05
RFX1P22670 MIR337-201ENST00000362281 93 ntBASIC2.24□□□□□ -2.05
RFX1P22670 RNU6-170P-201ENST00000362832 104 ntBASIC2.24□□□□□ -2.05
RFX1P22670 RNU1-17P-201ENST00000363022 152 ntBASIC2.24□□□□□ -2.05
RFX1P22670 SNORD45B-201ENST00000364617 72 ntBASIC2.24□□□□□ -2.05
RFX1P22670 RNU6-949P-201ENST00000384040 107 ntBASIC2.24□□□□□ -2.05
RFX1P22670 MIR1287-201ENST00000408492 90 ntBASIC2.24□□□□□ -2.05
RFX1P22670 AC096720.1-201ENST00000604441 183 ntBASIC2.24□□□□□ -2.05
RFX1P22670 AC062037.1-201ENST00000605302 128 ntBASIC2.24□□□□□ -2.05
RFX1P22670 AC012531.4-201ENST00000616509 177 ntBASIC2.24□□□□□ -2.05
RFX1P22670 MALAT1.1-201ENST00000618249 95 ntBASIC2.24□□□□□ -2.05
RFX1P22670 MIR7111-201ENST00000619751 72 ntBASIC2.24□□□□□ -2.05
RFX1P22670 Y_RNA.118-201ENST00000363300 101 ntBASIC2.23□□□□□ -2.05
RFX1P22670 RNU6-205P-201ENST00000390858 107 ntBASIC2.23□□□□□ -2.05
RFX1P22670 RNU6ATAC42P-201ENST00000408637 95 ntBASIC2.23□□□□□ -2.05
RFX1P22670 AC096949.1-201ENST00000412047 152 ntBASIC2.23□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 106.6 ms