Protein–RNA interactions for Protein: P04114

APOB, Apolipoprotein B-100, humanhuman

Known RBP Predictions only

Length 4,563 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOBP04114 Y_RNA.698-201ENST00000516798 118 ntBASIC-1.71□□□□□ -2.68
APOBP04114 AC064836.2-201ENST00000609491 462 ntBASIC-1.71□□□□□ -2.68
APOBP04114 RNU6-767P-201ENST00000384132 107 ntBASIC-1.71□□□□□ -2.68
APOBP04114 RNU6-524P-201ENST00000384270 107 ntBASIC-1.71□□□□□ -2.68
APOBP04114 RNU6-246P-201ENST00000384702 107 ntBASIC-1.71□□□□□ -2.68
APOBP04114 MIR548E-201ENST00000408287 88 ntBASIC-1.71□□□□□ -2.68
APOBP04114 GPR143P-201ENST00000434155 205 ntBASIC-1.71□□□□□ -2.68
APOBP04114 USP9YP23-201ENST00000455085 407 ntBASIC-1.71□□□□□ -2.68
APOBP04114 RNU6-1128P-201ENST00000362825 109 ntBASIC-1.71□□□□□ -2.68
APOBP04114 RNU6-170P-201ENST00000362832 104 ntBASIC-1.71□□□□□ -2.68
APOBP04114 RNU6-1303P-201ENST00000364841 107 ntBASIC-1.71□□□□□ -2.68
APOBP04114 Y_RNA.192-201ENST00000363977 102 ntBASIC-1.71□□□□□ -2.68
APOBP04114 RNU4-17P-201ENST00000365598 141 ntBASIC-1.71□□□□□ -2.68
APOBP04114 RNU6-102P-201ENST00000384485 104 ntBASIC-1.71□□□□□ -2.68
APOBP04114 MTATP6P24-201ENST00000576835 677 ntBASIC-1.71□□□□□ -2.68
APOBP04114 AP001542.1-201ENST00000591314 200 ntBASIC-1.71□□□□□ -2.68
APOBP04114 Y_RNA.349-201ENST00000365406 102 ntBASIC-1.72□□□□□ -2.68
APOBP04114 RNU6-1145P-201ENST00000384246 107 ntBASIC-1.72□□□□□ -2.68
APOBP04114 SNORA36B-201ENST00000410438 131 ntBASIC-1.72□□□□□ -2.68
APOBP04114 MIR2113-201ENST00000459007 91 ntBASIC-1.72□□□□□ -2.68
APOBP04114 RNU7-175P-201ENST00000515915 61 ntBASIC-1.72□□□□□ -2.68
APOBP04114 UBL5P4-201ENST00000562584 236 ntBASIC-1.72□□□□□ -2.68
APOBP04114 RNU5F-6P-201ENST00000362979 116 ntBASIC-1.72□□□□□ -2.68
APOBP04114 RNU6-236P-201ENST00000363886 106 ntBASIC-1.72□□□□□ -2.68
APOBP04114 Y_RNA.486-201ENST00000384398 107 ntBASIC-1.72□□□□□ -2.68
APOBP04114 RNU6-601P-201ENST00000384540 107 ntBASIC-1.72□□□□□ -2.68
APOBP04114 Y_RNA.82-201ENST00000363000 102 ntBASIC-1.72□□□□□ -2.69
APOBP04114 Y_RNA.92-201ENST00000363043 102 ntBASIC-1.72□□□□□ -2.69
APOBP04114 Y_RNA.235-201ENST00000364412 102 ntBASIC-1.72□□□□□ -2.69
APOBP04114 Y_RNA.306-201ENST00000365015 102 ntBASIC-1.72□□□□□ -2.69
APOBP04114 Y_RNA.308-201ENST00000365043 101 ntBASIC-1.72□□□□□ -2.69
APOBP04114 Y_RNA.312-201ENST00000365089 102 ntBASIC-1.72□□□□□ -2.69
APOBP04114 Y_RNA.322-201ENST00000365151 102 ntBASIC-1.72□□□□□ -2.69
APOBP04114 Y_RNA.650-201ENST00000459002 102 ntBASIC-1.72□□□□□ -2.69
APOBP04114 Y_RNA.777-201ENST00000516982 102 ntBASIC-1.72□□□□□ -2.69
APOBP04114 Y_RNA.771-201ENST00000598668 102 ntBASIC-1.72□□□□□ -2.69
APOBP04114 AC122108.2-201ENST00000611946 526 ntBASIC-1.72□□□□□ -2.69
APOBP04114 Y_RNA.789-201ENST00000622480 102 ntBASIC-1.72□□□□□ -2.69
APOBP04114 RNU6-715P-201ENST00000365204 103 ntBASIC-1.73□□□□□ -2.69
APOBP04114 MTND3P21-201ENST00000433774 331 ntBASIC-1.73□□□□□ -2.69
APOBP04114 AL080274.1-201ENST00000605565 220 ntBASIC-1.73□□□□□ -2.69
APOBP04114 Y_RNA.279-201ENST00000364763 95 ntBASIC-1.73□□□□□ -2.69
APOBP04114 Z82188.1-201ENST00000436709 154 ntBASIC-1.73□□□□□ -2.69
APOBP04114 RNU6-762P-201ENST00000517107 102 ntBASIC-1.73□□□□□ -2.69
APOBP04114 Y_RNA.243-201ENST00000364481 109 ntBASIC-1.73□□□□□ -2.69
APOBP04114 AC092954.2-201ENST00000609103 430 ntBASIC-1.73□□□□□ -2.69
APOBP04114 SNORD115-32-201ENST00000364079 82 ntBASIC-1.73□□□□□ -2.69
APOBP04114 MTATP6P15-201ENST00000527233 835 ntBASIC-1.73□□□□□ -2.69
APOBP04114 RNU6-766P-201ENST00000362478 107 ntBASIC-1.74□□□□□ -2.69
APOBP04114 Y_RNA.380-201ENST00000365663 111 ntBASIC-1.74□□□□□ -2.69
APOBP04114 RNU6-1014P-201ENST00000383940 103 ntBASIC-1.74□□□□□ -2.69
APOBP04114 U3.27-201ENST00000391237 200 ntBASIC-1.74□□□□□ -2.69
APOBP04114 CHEK2P4-201ENST00000450340 246 ntBASIC-1.74□□□□□ -2.69
APOBP04114 RNU7-195P-201ENST00000458793 62 ntBASIC-1.74□□□□□ -2.69
APOBP04114 RNU6-550P-201ENST00000391057 101 ntBASIC-1.74□□□□□ -2.69
APOBP04114 MTND3P23-201ENST00000431980 347 ntBASIC-1.74□□□□□ -2.69
APOBP04114 TPTE2P1-204ENST00000435256 593 ntBASIC-1.74□□□□□ -2.69
APOBP04114 RNU2-69P-201ENST00000516061 100 ntBASIC-1.74□□□□□ -2.69
APOBP04114 SNORD36C-201ENST00000516733 66 ntBASIC-1.74□□□□□ -2.69
APOBP04114 SATB1-AS1-243ENST00000627546 589 ntTSL 5 BASIC-1.74□□□□□ -2.69
APOBP04114 NKAIN2-205ENST00000546092 148 ntTSL 5 BASIC-1.74□□□□□ -2.69
APOBP04114 CYCSP46-201ENST00000423569 204 ntBASIC-1.74□□□□□ -2.69
APOBP04114 RNU6-1281P-201ENST00000516223 105 ntBASIC-1.74□□□□□ -2.69
APOBP04114 TPTEP1-208ENST00000636884 213 ntBASIC-1.74□□□□□ -2.69
APOBP04114 MIR206-201ENST00000384872 86 ntBASIC-1.75□□□□□ -2.69
APOBP04114 Y_RNA.596-201ENST00000410462 109 ntBASIC-1.75□□□□□ -2.69
APOBP04114 RNU6-1052P-201ENST00000411398 104 ntBASIC-1.75□□□□□ -2.69
APOBP04114 RNU6-719P-201ENST00000516671 104 ntBASIC-1.75□□□□□ -2.69
APOBP04114 RNU6-824P-201ENST00000363724 104 ntBASIC-1.75□□□□□ -2.69
APOBP04114 DLGAP5P1-201ENST00000430307 464 ntBASIC-1.75□□□□□ -2.69
APOBP04114 AC012414.2-201ENST00000559474 187 ntBASIC-1.75□□□□□ -2.69
APOBP04114 ZNF92P2-201ENST00000600543 1059 ntBASIC-1.75□□□□□ -2.69
APOBP04114 Y_RNA.46-201ENST00000362695 102 ntBASIC-1.75□□□□□ -2.69
APOBP04114 RNU6-1203P-201ENST00000410703 110 ntBASIC-1.75□□□□□ -2.69
APOBP04114 MTND3P9-201ENST00000429526 346 ntBASIC-1.75□□□□□ -2.69
APOBP04114 MIR4500-201ENST00000579472 76 ntBASIC-1.75□□□□□ -2.69
APOBP04114 AC004467.1-201ENST00000615678 330 ntBASIC-1.75□□□□□ -2.69
APOBP04114 UBL4A-207ENST00000630530 102 ntTSL 5 BASIC-1.75□□□□□ -2.69
APOBP04114 RNU6-1287P-201ENST00000362914 107 ntBASIC-1.76□□□□□ -2.69
APOBP04114 RNU6-1060P-201ENST00000384664 107 ntBASIC-1.76□□□□□ -2.69
APOBP04114 RNU6-365P-201ENST00000517113 106 ntBASIC-1.76□□□□□ -2.69
APOBP04114 U6.96-201ENST00000636425 70 ntBASIC-1.76□□□□□ -2.69
APOBP04114 RNU6-522P-201ENST00000364497 107 ntBASIC-1.76□□□□□ -2.69
APOBP04114 RNU6-728P-201ENST00000365375 104 ntBASIC-1.76□□□□□ -2.69
APOBP04114 RNU6-1267P-201ENST00000410747 107 ntBASIC-1.76□□□□□ -2.69
APOBP04114 AJ239322.2-201ENST00000421696 575 ntTSL 5 BASIC-1.76□□□□□ -2.69
APOBP04114 RNU6-1174P-201ENST00000517278 101 ntBASIC-1.76□□□□□ -2.69
APOBP04114 MIR3646-201ENST00000578301 84 ntBASIC-1.76□□□□□ -2.69
APOBP04114 AC008764.5-201ENST00000597851 190 ntTSL 5 BASIC-1.76□□□□□ -2.69
APOBP04114 RNY1P1-201ENST00000364372 112 ntBASIC-1.76□□□□□ -2.69
APOBP04114 MTND2P3-201ENST00000452458 470 ntBASIC-1.76□□□□□ -2.69
APOBP04114 SNORD42B-201ENST00000458893 67 ntBASIC-1.76□□□□□ -2.69
APOBP04114 MIR379-201ENST00000362218 67 ntBASIC-1.76□□□□□ -2.69
APOBP04114 Y_RNA.27-201ENST00000362540 103 ntBASIC-1.76□□□□□ -2.69
APOBP04114 RNU6-710P-201ENST00000410424 105 ntBASIC-1.76□□□□□ -2.69
APOBP04114 RNU7-113P-201ENST00000459273 62 ntBASIC-1.76□□□□□ -2.69
APOBP04114 RNU1-115P-201ENST00000365329 160 ntBASIC-1.77□□□□□ -2.69
APOBP04114 SNORD115-47-201ENST00000391226 86 ntBASIC-1.77□□□□□ -2.69
APOBP04114 RNU6-1215P-201ENST00000384441 102 ntBASIC-1.77□□□□□ -2.69
APOBP04114 MRPL42P2-201ENST00000403169 426 ntBASIC-1.77□□□□□ -2.69
Retrieved 100 of 98,524 protein–RNA pairs in 185.6 ms