Protein–RNA interactions for Protein: P01375

TNF, Tumor necrosis factor, humanhuman

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFP01375 RNU6-874P-201ENST00000362390 105 ntBASIC-1.51□□□□□ -2.65
TNFP01375 RNU6-845P-201ENST00000362578 103 ntBASIC-1.51□□□□□ -2.65
TNFP01375 RNU6-194P-201ENST00000363862 105 ntBASIC-1.51□□□□□ -2.65
TNFP01375 RNU6-553P-201ENST00000364047 96 ntBASIC-1.51□□□□□ -2.65
TNFP01375 Y_RNA.222-201ENST00000364264 102 ntBASIC-1.51□□□□□ -2.65
TNFP01375 Y_RNA.344-201ENST00000365381 112 ntBASIC-1.51□□□□□ -2.65
TNFP01375 MIR516A2-201ENST00000384888 90 ntBASIC-1.51□□□□□ -2.65
TNFP01375 MIR516A1-201ENST00000385033 90 ntBASIC-1.51□□□□□ -2.65
TNFP01375 AL590004.1-201ENST00000405321 300 ntBASIC-1.51□□□□□ -2.65
TNFP01375 PCMTD1P1-201ENST00000455560 355 ntBASIC-1.51□□□□□ -2.65
TNFP01375 SNORD2-201ENST00000459163 69 ntBASIC-1.51□□□□□ -2.65
TNFP01375 RNU6-397P-201ENST00000516226 104 ntBASIC-1.51□□□□□ -2.65
TNFP01375 RNU7-115P-201ENST00000516433 55 ntBASIC-1.51□□□□□ -2.65
TNFP01375 CR383656.11-201ENST00000552261 498 ntTSL 3 BASIC-1.51□□□□□ -2.65
TNFP01375 RN7SKP299-201ENST00000606679 301 ntBASIC-1.51□□□□□ -2.65
TNFP01375 AC098479.1-201ENST00000609225 154 ntBASIC-1.51□□□□□ -2.65
TNFP01375 RNU6-170P-201ENST00000362832 104 ntBASIC-1.52□□□□□ -2.65
TNFP01375 RNU6-595P-201ENST00000363944 107 ntBASIC-1.52□□□□□ -2.65
TNFP01375 Y_RNA.228-201ENST00000364346 98 ntBASIC-1.52□□□□□ -2.65
TNFP01375 RNU6-690P-201ENST00000365242 106 ntBASIC-1.52□□□□□ -2.65
TNFP01375 RNU6-841P-201ENST00000383872 107 ntBASIC-1.52□□□□□ -2.65
TNFP01375 RNU6-608P-201ENST00000383927 104 ntBASIC-1.52□□□□□ -2.65
TNFP01375 Y_RNA.400-201ENST00000383963 111 ntBASIC-1.52□□□□□ -2.65
TNFP01375 Y_RNA.463-201ENST00000384271 102 ntBASIC-1.52□□□□□ -2.65
TNFP01375 AL009048.1-201ENST00000450437 298 ntBASIC-1.52□□□□□ -2.65
TNFP01375 SNORD54-201ENST00000459159 67 ntBASIC-1.52□□□□□ -2.65
TNFP01375 AL512360.1-201ENST00000555346 234 ntBASIC-1.52□□□□□ -2.65
TNFP01375 MIR548W-201ENST00000581970 74 ntBASIC-1.52□□□□□ -2.65
TNFP01375 AC005014.3-201ENST00000605985 190 ntBASIC-1.52□□□□□ -2.65
TNFP01375 RNU7-10P-201ENST00000607194 63 ntBASIC-1.52□□□□□ -2.65
TNFP01375 AL021707.8-201ENST00000609428 183 ntBASIC-1.52□□□□□ -2.65
TNFP01375 Evf-2_5p.1-201ENST00000614213 142 ntBASIC-1.52□□□□□ -2.65
TNFP01375 AC091932.4-201ENST00000623386 200 ntBASIC-1.52□□□□□ -2.65
TNFP01375 MIR5683-201ENST00000636514 76 ntBASIC-1.52□□□□□ -2.65
TNFP01375 RNU6-181P-201ENST00000363225 107 ntBASIC-1.53□□□□□ -2.65
TNFP01375 RNU6-961P-201ENST00000363893 105 ntBASIC-1.53□□□□□ -2.65
TNFP01375 Y_RNA.342-201ENST00000365352 113 ntBASIC-1.53□□□□□ -2.65
TNFP01375 Y_RNA.403-201ENST00000383977 101 ntBASIC-1.53□□□□□ -2.65
TNFP01375 RNU6-246P-201ENST00000384702 107 ntBASIC-1.53□□□□□ -2.65
TNFP01375 TRAJ33-201ENST00000390504 57 ntAPPRIS P1 BASIC-1.53□□□□□ -2.65
TNFP01375 SNORA53-201ENST00000391141 249 ntBASIC-1.53□□□□□ -2.65
TNFP01375 MIR548I2-201ENST00000408348 149 ntBASIC-1.53□□□□□ -2.65
TNFP01375 RNU7-149P-201ENST00000516739 59 ntBASIC-1.53□□□□□ -2.65
TNFP01375 Y_RNA.706-201ENST00000516933 99 ntBASIC-1.53□□□□□ -2.65
TNFP01375 RNU6-445P-201ENST00000516949 107 ntBASIC-1.53□□□□□ -2.65
TNFP01375 AC024909.2-201ENST00000553035 286 ntBASIC-1.53□□□□□ -2.65
TNFP01375 MIR3682-201ENST00000581338 84 ntBASIC-1.53□□□□□ -2.65
TNFP01375 MIR2681-201ENST00000581814 105 ntBASIC-1.53□□□□□ -2.65
TNFP01375 AC011476.5-201ENST00000615594 130 ntBASIC-1.53□□□□□ -2.65
TNFP01375 TRDV1-202ENST00000621643 102 ntBASIC-1.53□□□□□ -2.65
TNFP01375 AC021613.1-201ENST00000623880 111 ntBASIC-1.53□□□□□ -2.65
TNFP01375 Y_RNA.157-201ENST00000363638 102 ntBASIC-1.54□□□□□ -2.66
TNFP01375 RNU6-879P-201ENST00000364328 108 ntBASIC-1.54□□□□□ -2.66
TNFP01375 SNORA63.6-201ENST00000364921 119 ntBASIC-1.54□□□□□ -2.66
TNFP01375 SNORA32-201ENST00000384072 121 ntBASIC-1.54□□□□□ -2.66
TNFP01375 RNU6-102P-201ENST00000384485 104 ntBASIC-1.54□□□□□ -2.66
TNFP01375 Y_RNA.556-201ENST00000384677 113 ntBASIC-1.54□□□□□ -2.66
TNFP01375 MIR520D-201ENST00000385002 87 ntBASIC-1.54□□□□□ -2.66
TNFP01375 MIR190B-201ENST00000401119 79 ntBASIC-1.54□□□□□ -2.66
TNFP01375 Y_RNA.613-201ENST00000410726 97 ntBASIC-1.54□□□□□ -2.66
TNFP01375 RNU6-693P-201ENST00000516134 107 ntBASIC-1.54□□□□□ -2.66
TNFP01375 RNU6-1270P-201ENST00000517128 108 ntBASIC-1.54□□□□□ -2.66
TNFP01375 RNU6-1238P-201ENST00000517215 102 ntBASIC-1.54□□□□□ -2.66
TNFP01375 NKAIN2-205ENST00000546092 148 ntTSL 5 BASIC-1.54□□□□□ -2.66
TNFP01375 MIR548AB-201ENST00000584917 84 ntBASIC-1.54□□□□□ -2.66
TNFP01375 AP000240.1-201ENST00000609910 452 ntBASIC-1.54□□□□□ -2.66
TNFP01375 AL138825.1-201ENST00000618587 192 ntBASIC-1.54□□□□□ -2.66
TNFP01375 ST7-AS2_1.1-201ENST00000622900 72 ntBASIC-1.54□□□□□ -2.66
TNFP01375 Y_RNA.27-201ENST00000362540 103 ntBASIC-1.55□□□□□ -2.66
TNFP01375 RNU6-235P-201ENST00000362644 107 ntBASIC-1.55□□□□□ -2.66
TNFP01375 Y_RNA.66-201ENST00000362862 102 ntBASIC-1.55□□□□□ -2.66
TNFP01375 RNU6-1306P-201ENST00000365219 99 ntBASIC-1.55□□□□□ -2.66
TNFP01375 Y_RNA.331-201ENST00000365267 102 ntBASIC-1.55□□□□□ -2.66
TNFP01375 RNU6-996P-201ENST00000365438 107 ntBASIC-1.55□□□□□ -2.66
TNFP01375 Y_RNA.525-201ENST00000384570 113 ntBASIC-1.55□□□□□ -2.66
TNFP01375 Y_RNA.557-201ENST00000384680 107 ntBASIC-1.55□□□□□ -2.66
TNFP01375 RNU6-95P-201ENST00000384697 107 ntBASIC-1.55□□□□□ -2.66
TNFP01375 MIR517A-201ENST00000385001 87 ntBASIC-1.55□□□□□ -2.66
TNFP01375 ELOCP20-201ENST00000422460 345 ntBASIC-1.55□□□□□ -2.66
TNFP01375 AP002392.1-201ENST00000537692 208 ntBASIC-1.55□□□□□ -2.66
TNFP01375 AC092954.2-201ENST00000609103 430 ntBASIC-1.55□□□□□ -2.66
TNFP01375 RNU6-924P-201ENST00000362926 108 ntBASIC-1.56□□□□□ -2.66
TNFP01375 RNU6-888P-201ENST00000363010 101 ntBASIC-1.56□□□□□ -2.66
TNFP01375 Y_RNA.231-201ENST00000364358 102 ntBASIC-1.56□□□□□ -2.66
TNFP01375 Y_RNA.419-201ENST00000384041 102 ntBASIC-1.56□□□□□ -2.66
TNFP01375 Y_RNA.603-201ENST00000410571 108 ntBASIC-1.56□□□□□ -2.66
TNFP01375 AC018880.2-201ENST00000414265 201 ntBASIC-1.56□□□□□ -2.66
TNFP01375 AL158210.1-201ENST00000448835 500 ntTSL 3 BASIC-1.56□□□□□ -2.66
TNFP01375 RNU6-408P-201ENST00000515910 100 ntBASIC-1.56□□□□□ -2.66
TNFP01375 ACA59.1-201ENST00000515966 143 ntBASIC-1.56□□□□□ -2.66
TNFP01375 RNU6-1006P-201ENST00000516998 103 ntBASIC-1.56□□□□□ -2.66
TNFP01375 AC107958.3-201ENST00000553410 431 ntTSL 3 BASIC-1.56□□□□□ -2.66
TNFP01375 MIR4748-201ENST00000578076 82 ntBASIC-1.56□□□□□ -2.66
TNFP01375 AC087741.2-201ENST00000619415 172 ntBASIC-1.56□□□□□ -2.66
TNFP01375 DLX6-AS1_1.1-201ENST00000621599 180 ntBASIC-1.56□□□□□ -2.66
TNFP01375 SNORD114-10-201ENST00000363409 72 ntBASIC-1.57□□□□□ -2.66
TNFP01375 RNU6-957P-201ENST00000363652 99 ntBASIC-1.57□□□□□ -2.66
TNFP01375 Y_RNA.159-201ENST00000363674 87 ntBASIC-1.57□□□□□ -2.66
TNFP01375 RNU6-801P-201ENST00000364087 105 ntBASIC-1.57□□□□□ -2.66
TNFP01375 Y_RNA.340-201ENST00000365330 92 ntBASIC-1.57□□□□□ -2.66
Retrieved 100 of 98,524 protein–RNA pairs in 196.8 ms