Protein–RNA interactions for Protein: O75631

UPK3A, Uroplakin-3a, humanhuman

Predictions only

Length 287 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3AO75631 AC104408.1-201ENST00000605241 170 ntBASIC-0.02□□□□□ -2.41
UPK3AO75631 RNU4-16P-201ENST00000364737 141 ntBASIC-0.03□□□□□ -2.41
UPK3AO75631 RNU4-17P-201ENST00000365598 141 ntBASIC-0.03□□□□□ -2.41
UPK3AO75631 Y_RNA.416-201ENST00000384014 113 ntBASIC-0.03□□□□□ -2.41
UPK3AO75631 MIR6828-201ENST00000636181 60 ntBASIC-0.03□□□□□ -2.41
UPK3AO75631 AC091304.10-201ENST00000641554 121 ntBASIC-0.03□□□□□ -2.41
UPK3AO75631 MIR411-201ENST00000362239 96 ntBASIC-0.04□□□□□ -2.42
UPK3AO75631 SNORD28-201ENST00000384706 75 ntBASIC-0.04□□□□□ -2.42
UPK3AO75631 RNU6-985P-201ENST00000410182 104 ntBASIC-0.04□□□□□ -2.42
UPK3AO75631 Y_RNA.660-201ENST00000516002 120 ntBASIC-0.04□□□□□ -2.42
UPK3AO75631 AL442067.1-201ENST00000613261 223 ntBASIC-0.04□□□□□ -2.42
UPK3AO75631 AC067863.3-201ENST00000624172 122 ntBASIC-0.04□□□□□ -2.42
UPK3AO75631 Y_RNA.61-201ENST00000362835 102 ntBASIC-0.05□□□□□ -2.42
UPK3AO75631 SNORD114-5-201ENST00000362928 70 ntBASIC-0.05□□□□□ -2.42
UPK3AO75631 RNY1P13-201ENST00000365030 105 ntBASIC-0.05□□□□□ -2.42
UPK3AO75631 Y_RNA.433-201ENST00000384089 102 ntBASIC-0.05□□□□□ -2.42
UPK3AO75631 MIR760-201ENST00000390220 80 ntBASIC-0.05□□□□□ -2.42
UPK3AO75631 RNU5E-9P-201ENST00000411164 104 ntBASIC-0.05□□□□□ -2.42
UPK3AO75631 AL121914.1-201ENST00000450188 156 ntBASIC-0.05□□□□□ -2.42
UPK3AO75631 RNU6-1194P-201ENST00000516208 104 ntBASIC-0.05□□□□□ -2.42
UPK3AO75631 DEFB131E-201ENST00000532329 154 ntBASIC-0.05□□□□□ -2.42
UPK3AO75631 MIR4639-201ENST00000584938 69 ntBASIC-0.05□□□□□ -2.42
UPK3AO75631 AC244669.1-204ENST00000621564 178 ntBASIC-0.05□□□□□ -2.42
UPK3AO75631 Y_RNA.512-201ENST00000384518 102 ntBASIC-0.06□□□□□ -2.42
UPK3AO75631 RNU4-43P-201ENST00000410628 137 ntBASIC-0.06□□□□□ -2.42
UPK3AO75631 AL356055.1-201ENST00000602528 446 ntBASIC-0.06□□□□□ -2.42
UPK3AO75631 TUG1_4.1-201ENST00000619464 181 ntBASIC-0.06□□□□□ -2.42
UPK3AO75631 MTND5P32-201ENST00000560711 1802 ntBASIC-0.06□□□□□ -2.42
UPK3AO75631 RNU6-103P-201ENST00000363686 107 ntBASIC-0.07□□□□□ -2.42
UPK3AO75631 Y_RNA.262-201ENST00000364641 102 ntBASIC-0.07□□□□□ -2.42
UPK3AO75631 SNORA33.2-201ENST00000365413 134 ntBASIC-0.07□□□□□ -2.42
UPK3AO75631 RNU6-639P-201ENST00000384074 107 ntBASIC-0.07□□□□□ -2.42
UPK3AO75631 Y_RNA.515-201ENST00000384535 112 ntBASIC-0.07□□□□□ -2.42
UPK3AO75631 MIR643-201ENST00000385267 97 ntBASIC-0.07□□□□□ -2.42
UPK3AO75631 RNU6-127P-201ENST00000390897 107 ntBASIC-0.07□□□□□ -2.42
UPK3AO75631 RNU6-1109P-201ENST00000391187 107 ntBASIC-0.07□□□□□ -2.42
UPK3AO75631 RNU6ATAC11P-201ENST00000408541 125 ntBASIC-0.07□□□□□ -2.42
UPK3AO75631 RNU6-893P-201ENST00000458841 100 ntBASIC-0.07□□□□□ -2.42
UPK3AO75631 SNORD116-25-201ENST00000516517 92 ntBASIC-0.07□□□□□ -2.42
UPK3AO75631 RNU6-1149P-201ENST00000516810 97 ntBASIC-0.07□□□□□ -2.42
UPK3AO75631 MIR4282-201ENST00000583613 67 ntBASIC-0.07□□□□□ -2.42
UPK3AO75631 RNU6-1126P-201ENST00000384002 107 ntBASIC-0.08□□□□□ -2.42
UPK3AO75631 MIR610-201ENST00000385139 96 ntBASIC-0.08□□□□□ -2.42
UPK3AO75631 RNU6-1086P-201ENST00000410930 100 ntBASIC-0.08□□□□□ -2.42
UPK3AO75631 MIR4752-201ENST00000579672 72 ntBASIC-0.08□□□□□ -2.42
UPK3AO75631 AP001094.1-201ENST00000579805 193 ntBASIC-0.08□□□□□ -2.42
UPK3AO75631 MIR335-201ENST00000362173 94 ntBASIC-0.09□□□□□ -2.42
UPK3AO75631 Y_RNA.171-201ENST00000363760 102 ntBASIC-0.09□□□□□ -2.42
UPK3AO75631 RNU6-978P-201ENST00000364371 103 ntBASIC-0.09□□□□□ -2.42
UPK3AO75631 RNU6-867P-201ENST00000364956 107 ntBASIC-0.09□□□□□ -2.42
UPK3AO75631 TRAJ54-201ENST00000390484 60 ntAPPRIS P1 BASIC-0.09□□□□□ -2.42
UPK3AO75631 RNU7-79P-201ENST00000516082 62 ntBASIC-0.09□□□□□ -2.42
UPK3AO75631 RNU6-635P-201ENST00000516651 102 ntBASIC-0.09□□□□□ -2.42
UPK3AO75631 RNU6-531P-201ENST00000516694 104 ntBASIC-0.09□□□□□ -2.42
UPK3AO75631 SCARNA15-202ENST00000516881 127 ntBASIC-0.09□□□□□ -2.42
UPK3AO75631 RNU6-1258P-201ENST00000516911 111 ntBASIC-0.09□□□□□ -2.42
UPK3AO75631 Y_RNA.757-201ENST00000578934 114 ntBASIC-0.09□□□□□ -2.42
UPK3AO75631 MIR378D2-201ENST00000580636 98 ntBASIC-0.09□□□□□ -2.42
UPK3AO75631 MIR4744-201ENST00000581563 82 ntBASIC-0.09□□□□□ -2.42
UPK3AO75631 U6.104-201ENST00000637979 90 ntBASIC-0.09□□□□□ -2.42
UPK3AO75631 RNU4-58P-201ENST00000363192 141 ntBASIC-0.1□□□□□ -2.43
UPK3AO75631 SNORA63.5-201ENST00000363548 123 ntBASIC-0.1□□□□□ -2.43
UPK3AO75631 RNA5SP245-201ENST00000364239 121 ntBASIC-0.1□□□□□ -2.43
UPK3AO75631 RNU6-923P-201ENST00000364753 107 ntBASIC-0.1□□□□□ -2.43
UPK3AO75631 RNA5SP128-201ENST00000365305 116 ntBASIC-0.1□□□□□ -2.43
UPK3AO75631 Y_RNA.362-201ENST00000365518 110 ntBASIC-0.1□□□□□ -2.43
UPK3AO75631 RNU4-70P-201ENST00000384579 139 ntBASIC-0.1□□□□□ -2.43
UPK3AO75631 MIR1302-6-201ENST00000408466 90 ntBASIC-0.1□□□□□ -2.43
UPK3AO75631 RNA5SP395-201ENST00000516567 118 ntBASIC-0.1□□□□□ -2.43
UPK3AO75631 MIR6759-201ENST00000638110 65 ntBASIC-0.1□□□□□ -2.43
UPK3AO75631 Y_RNA.54-201ENST00000362766 105 ntBASIC-0.11□□□□□ -2.43
UPK3AO75631 RNU6-238P-201ENST00000363313 106 ntBASIC-0.11□□□□□ -2.43
UPK3AO75631 RNA5SP133-201ENST00000363368 119 ntBASIC-0.11□□□□□ -2.43
UPK3AO75631 SNORA2A-201ENST00000383885 135 ntBASIC-0.11□□□□□ -2.43
UPK3AO75631 RNU6V-201ENST00000384105 107 ntBASIC-0.11□□□□□ -2.43
UPK3AO75631 Y_RNA.461-201ENST00000384263 103 ntBASIC-0.11□□□□□ -2.43
UPK3AO75631 Y_RNA.483-201ENST00000384380 101 ntBASIC-0.11□□□□□ -2.43
UPK3AO75631 MIRLET7F2-201ENST00000385277 83 ntBASIC-0.11□□□□□ -2.43
UPK3AO75631 RNU6-848P-201ENST00000515948 107 ntBASIC-0.11□□□□□ -2.43
UPK3AO75631 RNU6-617P-201ENST00000516147 107 ntBASIC-0.11□□□□□ -2.43
UPK3AO75631 RNU6-473P-201ENST00000516164 107 ntBASIC-0.11□□□□□ -2.43
UPK3AO75631 RNU6-1049P-201ENST00000516414 107 ntBASIC-0.11□□□□□ -2.43
UPK3AO75631 AP003072.1-201ENST00000531740 145 ntBASIC-0.11□□□□□ -2.43
UPK3AO75631 MIR4290-201ENST00000583807 95 ntBASIC-0.11□□□□□ -2.43
UPK3AO75631 ABCA9-AS1-203ENST00000627596 426 ntTSL 5 BASIC-0.11□□□□□ -2.43
UPK3AO75631 MIR499B-201ENST00000636498 73 ntBASIC-0.11□□□□□ -2.43
UPK3AO75631 U6.109-201ENST00000636749 87 ntBASIC-0.11□□□□□ -2.43
UPK3AO75631 RNU6-302P-201ENST00000365249 107 ntBASIC-0.12□□□□□ -2.43
UPK3AO75631 MIR593-201ENST00000384856 100 ntBASIC-0.12□□□□□ -2.43
UPK3AO75631 MIR624-201ENST00000385217 97 ntBASIC-0.12□□□□□ -2.43
UPK3AO75631 MT-TW-201ENST00000387382 68 ntBASIC-0.12□□□□□ -2.43
UPK3AO75631 MTATP8P1-201ENST00000467115 207 ntBASIC-0.12□□□□□ -2.43
UPK3AO75631 RPL39P34-201ENST00000477141 156 ntBASIC-0.12□□□□□ -2.43
UPK3AO75631 MIR101-2-201ENST00000362195 79 ntBASIC-0.13□□□□□ -2.43
UPK3AO75631 Y_RNA.49-201ENST00000362714 112 ntBASIC-0.13□□□□□ -2.43
UPK3AO75631 Y_RNA.178-201ENST00000363832 102 ntBASIC-0.13□□□□□ -2.43
UPK3AO75631 RNY1P6-201ENST00000384193 109 ntBASIC-0.13□□□□□ -2.43
UPK3AO75631 MIR145-201ENST00000384967 88 ntBASIC-0.13□□□□□ -2.43
UPK3AO75631 RNU6-578P-201ENST00000390980 103 ntBASIC-0.13□□□□□ -2.43
UPK3AO75631 RNU7-113P-201ENST00000459273 62 ntBASIC-0.13□□□□□ -2.43
Retrieved 100 of 98,524 protein–RNA pairs in 170.5 ms