Protein–RNA interactions for Protein: O75445

USH2A, Usherin, humanhuman

Predictions only

Length 5,202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USH2AO75445 U6.58-201ENST00000613107 107 ntBASIC-1.07□□□□□ -2.58
USH2AO75445 WT1-AS_8.1-201ENST00000615200 275 ntBASIC-1.07□□□□□ -2.58
USH2AO75445 U6.109-201ENST00000636749 87 ntBASIC-1.07□□□□□ -2.58
USH2AO75445 RNU6-696P-201ENST00000390834 107 ntBASIC-1.07□□□□□ -2.58
USH2AO75445 ATP1B3-AS1-201ENST00000492725 376 ntTSL 5 BASIC-1.07□□□□□ -2.58
USH2AO75445 Y_RNA.809-201ENST00000516058 95 ntBASIC-1.07□□□□□ -2.58
USH2AO75445 MIR548AG1-201ENST00000579932 66 ntBASIC-1.07□□□□□ -2.58
USH2AO75445 U6.42-201ENST00000618440 107 ntBASIC-1.07□□□□□ -2.58
USH2AO75445 AC023449.1-201ENST00000454464 154 ntBASIC-1.07□□□□□ -2.58
USH2AO75445 RNU6-762P-201ENST00000517107 102 ntBASIC-1.07□□□□□ -2.58
USH2AO75445 MIR2681-201ENST00000581814 105 ntBASIC-1.07□□□□□ -2.58
USH2AO75445 MIR3170-201ENST00000582699 77 ntBASIC-1.07□□□□□ -2.58
USH2AO75445 U2.18-201ENST00000622185 84 ntBASIC-1.07□□□□□ -2.58
USH2AO75445 AC103706.2-201ENST00000638080 240 ntBASIC-1.07□□□□□ -2.58
USH2AO75445 Y_RNA.129-201ENST00000363392 110 ntBASIC-1.07□□□□□ -2.58
USH2AO75445 RNU6-310P-201ENST00000384655 107 ntBASIC-1.07□□□□□ -2.58
USH2AO75445 MIR548E-201ENST00000408287 88 ntBASIC-1.07□□□□□ -2.58
USH2AO75445 AC093899.1-201ENST00000457984 376 ntBASIC-1.07□□□□□ -2.58
USH2AO75445 DAOA-AS1_2.1-201ENST00000614829 187 ntBASIC-1.07□□□□□ -2.58
USH2AO75445 AC084781.2-201ENST00000615568 161 ntBASIC-1.07□□□□□ -2.58
USH2AO75445 Y_RNA.159-201ENST00000363674 87 ntBASIC-1.08□□□□□ -2.58
USH2AO75445 Y_RNA.207-201ENST00000364142 106 ntBASIC-1.08□□□□□ -2.58
USH2AO75445 Y_RNA.320-201ENST00000365144 102 ntBASIC-1.08□□□□□ -2.58
USH2AO75445 RNU6-564P-201ENST00000410983 104 ntBASIC-1.08□□□□□ -2.58
USH2AO75445 AC091946.2-201ENST00000606105 291 ntBASIC-1.08□□□□□ -2.58
USH2AO75445 MIR494-201ENST00000349529 81 ntBASIC-1.08□□□□□ -2.58
USH2AO75445 RNU6-913P-201ENST00000390913 95 ntBASIC-1.08□□□□□ -2.58
USH2AO75445 TUSC7.1-201ENST00000610969 165 ntBASIC-1.08□□□□□ -2.58
USH2AO75445 RNY4P19-201ENST00000362530 96 ntBASIC-1.08□□□□□ -2.58
USH2AO75445 RNU6-1120P-201ENST00000362988 108 ntBASIC-1.08□□□□□ -2.58
USH2AO75445 SNORD90-201ENST00000391145 111 ntBASIC-1.08□□□□□ -2.58
USH2AO75445 AC091179.3-201ENST00000474761 144 ntBASIC-1.08□□□□□ -2.58
USH2AO75445 RNU1-54P-201ENST00000517181 120 ntBASIC-1.08□□□□□ -2.58
USH2AO75445 RNU5F-3P-201ENST00000363767 117 ntBASIC-1.08□□□□□ -2.58
USH2AO75445 RNU5A-8P-201ENST00000364102 114 ntBASIC-1.08□□□□□ -2.58
USH2AO75445 RNU6-136P-201ENST00000384663 107 ntBASIC-1.08□□□□□ -2.58
USH2AO75445 SNORA53-201ENST00000391141 249 ntBASIC-1.08□□□□□ -2.58
USH2AO75445 Y_RNA.793-201ENST00000411222 111 ntBASIC-1.08□□□□□ -2.58
USH2AO75445 SNORD42B-201ENST00000458893 67 ntBASIC-1.08□□□□□ -2.58
USH2AO75445 RNU6-677P-201ENST00000516914 101 ntBASIC-1.08□□□□□ -2.58
USH2AO75445 AC120042.2-201ENST00000521556 667 ntTSL 2 BASIC-1.08□□□□□ -2.58
USH2AO75445 Y_RNA.64-201ENST00000362845 102 ntBASIC-1.09□□□□□ -2.58
USH2AO75445 MIR578-201ENST00000384828 96 ntBASIC-1.09□□□□□ -2.58
USH2AO75445 RNU6-757P-201ENST00000410334 100 ntBASIC-1.09□□□□□ -2.58
USH2AO75445 AL161932.1-201ENST00000437408 146 ntBASIC-1.09□□□□□ -2.58
USH2AO75445 AC018710.1-201ENST00000506509 158 ntBASIC-1.09□□□□□ -2.58
USH2AO75445 RNU6-1337P-201ENST00000516525 95 ntBASIC-1.09□□□□□ -2.58
USH2AO75445 RNU6-407P-201ENST00000365280 104 ntBASIC-1.09□□□□□ -2.58
USH2AO75445 RNU6-788P-201ENST00000390967 104 ntBASIC-1.09□□□□□ -2.58
USH2AO75445 RPL39P6-201ENST00000448289 150 ntBASIC-1.09□□□□□ -2.58
USH2AO75445 RNU6-543P-201ENST00000362576 108 ntBASIC-1.09□□□□□ -2.58
USH2AO75445 RNU6-247P-201ENST00000362636 107 ntBASIC-1.09□□□□□ -2.58
USH2AO75445 TRDJ1-201ENST00000390473 51 ntAPPRIS P1 BASIC-1.09□□□□□ -2.58
USH2AO75445 RNU2-38P-201ENST00000410856 79 ntBASIC-1.09□□□□□ -2.58
USH2AO75445 AC005009.1-201ENST00000423979 269 ntTSL 2 BASIC-1.09□□□□□ -2.58
USH2AO75445 Y_RNA.398-201ENST00000383952 99 ntBASIC-1.09□□□□□ -2.58
USH2AO75445 RNU6-524P-201ENST00000384270 107 ntBASIC-1.09□□□□□ -2.58
USH2AO75445 RNU6-1177P-201ENST00000391058 104 ntBASIC-1.09□□□□□ -2.58
USH2AO75445 RNA5SP494-201ENST00000410653 129 ntBASIC-1.09□□□□□ -2.58
USH2AO75445 RNA5SP135-201ENST00000517019 125 ntBASIC-1.09□□□□□ -2.58
USH2AO75445 RNU6-433P-201ENST00000363216 104 ntBASIC-1.1□□□□□ -2.58
USH2AO75445 RNU6-960P-201ENST00000364056 120 ntBASIC-1.1□□□□□ -2.58
USH2AO75445 RNU6-643P-201ENST00000384018 107 ntBASIC-1.1□□□□□ -2.58
USH2AO75445 SNORD65B-201ENST00000459126 73 ntBASIC-1.1□□□□□ -2.58
USH2AO75445 SUMO1P1-201ENST00000497904 306 ntBASIC-1.1□□□□□ -2.58
USH2AO75445 RNU6-551P-201ENST00000516661 103 ntBASIC-1.1□□□□□ -2.58
USH2AO75445 RNA5SP54-201ENST00000516951 92 ntBASIC-1.1□□□□□ -2.58
USH2AO75445 RRM2B-207ENST00000519962 201 ntTSL 1 (best) BASIC-1.1□□□□□ -2.58
USH2AO75445 AC004467.1-201ENST00000615678 330 ntBASIC-1.1□□□□□ -2.59
USH2AO75445 U6.101-201ENST00000637707 76 ntBASIC-1.1□□□□□ -2.59
USH2AO75445 Y_RNA.101-201ENST00000363154 102 ntBASIC-1.1□□□□□ -2.59
USH2AO75445 RNU6-1086P-201ENST00000410930 100 ntBASIC-1.1□□□□□ -2.59
USH2AO75445 MTATP6P15-201ENST00000527233 835 ntBASIC-1.1□□□□□ -2.59
USH2AO75445 AC099654.12-201ENST00000639868 649 ntBASIC-1.1□□□□□ -2.59
USH2AO75445 RNU6-1047P-201ENST00000364418 107 ntBASIC-1.1□□□□□ -2.59
USH2AO75445 Y_RNA.307-201ENST00000365022 117 ntBASIC-1.1□□□□□ -2.59
USH2AO75445 RNU6-669P-201ENST00000365575 107 ntBASIC-1.1□□□□□ -2.59
USH2AO75445 Y_RNA.415-201ENST00000384012 112 ntBASIC-1.1□□□□□ -2.59
USH2AO75445 RNU6-807P-201ENST00000516805 107 ntBASIC-1.1□□□□□ -2.59
USH2AO75445 MIR4637-201ENST00000582405 84 ntBASIC-1.1□□□□□ -2.59
USH2AO75445 RNU6-1039P-201ENST00000383931 107 ntBASIC-1.11□□□□□ -2.59
USH2AO75445 U3.27-201ENST00000391237 200 ntBASIC-1.11□□□□□ -2.59
USH2AO75445 RNU6-1043P-201ENST00000410355 99 ntBASIC-1.11□□□□□ -2.59
USH2AO75445 RNU6-693P-201ENST00000516134 107 ntBASIC-1.11□□□□□ -2.59
USH2AO75445 AP000720.1-201ENST00000625091 483 ntBASIC-1.11□□□□□ -2.59
USH2AO75445 U6.100-201ENST00000636230 99 ntBASIC-1.11□□□□□ -2.59
USH2AO75445 RNU6-235P-201ENST00000362644 107 ntBASIC-1.11□□□□□ -2.59
USH2AO75445 SNORA26.6-201ENST00000391256 115 ntBASIC-1.11□□□□□ -2.59
USH2AO75445 DLGAP5P1-201ENST00000430307 464 ntBASIC-1.11□□□□□ -2.59
USH2AO75445 AL135787.1-201ENST00000450154 302 ntTSL 3 BASIC-1.11□□□□□ -2.59
USH2AO75445 RNU7-24P-201ENST00000458867 62 ntBASIC-1.11□□□□□ -2.59
USH2AO75445 RNU7-154P-201ENST00000516194 62 ntBASIC-1.11□□□□□ -2.59
USH2AO75445 MIR3146-201ENST00000580367 79 ntBASIC-1.11□□□□□ -2.59
USH2AO75445 RNU6-1254P-201ENST00000391266 104 ntBASIC-1.11□□□□□ -2.59
USH2AO75445 RNY3P8-201ENST00000411366 126 ntBASIC-1.11□□□□□ -2.59
USH2AO75445 MTND3P16-201ENST00000452205 344 ntBASIC-1.11□□□□□ -2.59
USH2AO75445 RNU7-195P-201ENST00000458793 62 ntBASIC-1.11□□□□□ -2.59
USH2AO75445 SNORA25.10-201ENST00000515926 124 ntBASIC-1.11□□□□□ -2.59
USH2AO75445 AC107905.1-201ENST00000616204 426 ntBASIC-1.11□□□□□ -2.59
USH2AO75445 RNU6-97P-201ENST00000363387 104 ntBASIC-1.11□□□□□ -2.59
Retrieved 100 of 98,524 protein–RNA pairs in 199.9 ms