Protein–RNA interactions for Protein: O43364

HOXA2, Homeobox protein Hox-A2, humanhuman

Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA2O43364 RNA5SP320-201ENST00000516263 124 ntBASIC2.77□□□□□ -1.97
HOXA2O43364 MIR6715A-201ENST00000615929 79 ntBASIC2.77□□□□□ -1.97
HOXA2O43364 RNF219-AS1-214ENST00000607862 6001 ntTSL 1 (best) BASIC2.77□□□□□ -1.97
HOXA2O43364 ENAM-201ENST00000396073 5679 ntAPPRIS P1 TSL 1 (best) BASIC2.76□□□□□ -1.97
HOXA2O43364 MIR563-201ENST00000385080 79 ntBASIC2.76□□□□□ -1.97
HOXA2O43364 SNORD41-201ENST00000386967 70 ntBASIC2.76□□□□□ -1.97
HOXA2O43364 Y_RNA.648-201ENST00000459455 110 ntBASIC2.76□□□□□ -1.97
HOXA2O43364 RNU6-922P-201ENST00000516753 99 ntBASIC2.76□□□□□ -1.97
HOXA2O43364 MIR4264-201ENST00000583520 66 ntBASIC2.76□□□□□ -1.97
HOXA2O43364 AL096861.1-201ENST00000610899 123 ntBASIC2.76□□□□□ -1.97
HOXA2O43364 ZNRD1-AS1_3.8-201ENST00000611686 104 ntBASIC2.76□□□□□ -1.97
HOXA2O43364 U7.4-201ENST00000614961 63 ntBASIC2.76□□□□□ -1.97
HOXA2O43364 AGL-204ENST00000370161 6923 ntTSL 5 BASIC2.76□□□□□ -1.97
HOXA2O43364 PCM1-222ENST00000524226 5955 ntTSL 1 (best) BASIC2.75□□□□□ -1.97
HOXA2O43364 RNU6-1229P-201ENST00000364295 107 ntBASIC2.75□□□□□ -1.97
HOXA2O43364 Y_RNA.565-201ENST00000384719 101 ntBASIC2.75□□□□□ -1.97
HOXA2O43364 AL161935.2-201ENST00000414627 60 ntBASIC2.75□□□□□ -1.97
HOXA2O43364 JTBP1-201ENST00000441314 247 ntBASIC2.75□□□□□ -1.97
HOXA2O43364 snoU13.11-201ENST00000459219 104 ntBASIC2.75□□□□□ -1.97
HOXA2O43364 RNA5SP82-201ENST00000516707 92 ntBASIC2.75□□□□□ -1.97
HOXA2O43364 MIR6895-201ENST00000613497 78 ntBASIC2.75□□□□□ -1.97
HOXA2O43364 SENP7-206ENST00000394094 4703 ntAPPRIS ALT2 TSL 1 (best) BASIC2.75□□□□□ -1.97
HOXA2O43364 RNU6-1094P-201ENST00000362416 104 ntBASIC2.74□□□□□ -1.97
HOXA2O43364 SNORA72.6-201ENST00000384520 129 ntBASIC2.74□□□□□ -1.97
HOXA2O43364 RNU6ATAC40P-201ENST00000408580 137 ntBASIC2.74□□□□□ -1.97
HOXA2O43364 ZNF658B-202ENST00000615961 3375 ntBASIC2.74□□□□□ -1.97
HOXA2O43364 MAP3K2-203ENST00000409947 10992 ntAPPRIS P1 TSL 1 (best) BASIC2.73□□□□□ -1.97
HOXA2O43364 STX7-202ENST00000367941 15791 ntAPPRIS P1 TSL 1 (best) BASIC2.73□□□□□ -1.97
HOXA2O43364 NAALADL2-203ENST00000454872 9865 ntAPPRIS P1 TSL 1 (best) BASIC2.73□□□□□ -1.97
HOXA2O43364 FOXP2-211ENST00000408937 6443 ntTSL 1 (best) BASIC2.73□□□□□ -1.97
HOXA2O43364 U8.2-201ENST00000363156 134 ntBASIC2.73□□□□□ -1.97
HOXA2O43364 Y_RNA.119-201ENST00000363301 96 ntBASIC2.73□□□□□ -1.97
HOXA2O43364 TRAJ1-201ENST00000390536 62 ntAPPRIS P1 BASIC2.73□□□□□ -1.97
HOXA2O43364 RNU6-788P-201ENST00000390967 104 ntBASIC2.73□□□□□ -1.97
HOXA2O43364 RNU4-53P-201ENST00000410828 140 ntBASIC2.73□□□□□ -1.97
HOXA2O43364 RNU1-41P-201ENST00000516161 162 ntBASIC2.73□□□□□ -1.97
HOXA2O43364 RNU1-48P-201ENST00000516400 162 ntBASIC2.73□□□□□ -1.97
HOXA2O43364 MIR3192-201ENST00000584920 77 ntBASIC2.73□□□□□ -1.97
HOXA2O43364 CENPE-201ENST00000265148 8612 ntAPPRIS P1 TSL 2 BASIC2.72□□□□□ -1.97
HOXA2O43364 DENND4A-202ENST00000443035 8665 ntTSL 1 (best) BASIC2.72□□□□□ -1.97
HOXA2O43364 Y_RNA.545-201ENST00000384652 105 ntBASIC2.72□□□□□ -1.97
HOXA2O43364 RNU6-380P-201ENST00000410207 107 ntBASIC2.72□□□□□ -1.97
HOXA2O43364 BX276092.1-201ENST00000427368 251 ntBASIC2.72□□□□□ -1.97
HOXA2O43364 HSPE1P24-201ENST00000450782 238 ntBASIC2.72□□□□□ -1.97
HOXA2O43364 RNU7-85P-201ENST00000458851 63 ntBASIC2.72□□□□□ -1.97
HOXA2O43364 AP000942.3-201ENST00000603702 160 ntBASIC2.72□□□□□ -1.97
HOXA2O43364 MIR6740-201ENST00000618268 113 ntBASIC2.72□□□□□ -1.97
HOXA2O43364 WARS-244ENST00000627608 123 ntTSL 5 BASIC2.72□□□□□ -1.97
HOXA2O43364 Y_RNA.508-201ENST00000384502 114 ntBASIC2.71□□□□□ -1.98
HOXA2O43364 AL359511.1-201ENST00000402970 211 ntBASIC2.71□□□□□ -1.98
HOXA2O43364 SNORA3.2-201ENST00000408221 125 ntBASIC2.71□□□□□ -1.98
HOXA2O43364 RNU6-1165P-201ENST00000410119 107 ntBASIC2.71□□□□□ -1.98
HOXA2O43364 MIR2115-201ENST00000516657 100 ntBASIC2.71□□□□□ -1.98
HOXA2O43364 MIR5092-201ENST00000583139 88 ntBASIC2.71□□□□□ -1.98
HOXA2O43364 NEDD4-205ENST00000506154 6751 ntTSL 1 (best) BASIC2.71□□□□□ -1.98
HOXA2O43364 DYNC2H1-202ENST00000375735 13678 ntAPPRIS ALT1 TSL 1 (best) BASIC2.71□□□□□ -1.98
HOXA2O43364 ZNF654-201ENST00000309495 4957 ntAPPRIS P2 TSL 1 (best) BASIC2.7□□□□□ -1.98
HOXA2O43364 AC008163.1-202ENST00000636004 2889 ntBASIC2.7□□□□□ -1.98
HOXA2O43364 RNU6-624P-201ENST00000363411 107 ntBASIC2.7□□□□□ -1.98
HOXA2O43364 MT-TF-201ENST00000387314 71 ntBASIC2.7□□□□□ -1.98
HOXA2O43364 MT-TN-201ENST00000387400 73 ntBASIC2.7□□□□□ -1.98
HOXA2O43364 MIR1302-7-201ENST00000408841 72 ntBASIC2.7□□□□□ -1.98
HOXA2O43364 RNA5SP425-201ENST00000410336 112 ntBASIC2.7□□□□□ -1.98
HOXA2O43364 AL356320.1-201ENST00000429616 163 ntBASIC2.7□□□□□ -1.98
HOXA2O43364 RNU7-62P-201ENST00000458856 62 ntBASIC2.7□□□□□ -1.98
HOXA2O43364 PRKD3-201ENST00000234179 5900 ntAPPRIS P1 TSL 1 (best) BASIC2.69□□□□□ -1.98
HOXA2O43364 MIR30D-201ENST00000362283 70 ntBASIC2.69□□□□□ -1.98
HOXA2O43364 RNA5SP289-201ENST00000362332 137 ntBASIC2.69□□□□□ -1.98
HOXA2O43364 SNORA25.3-201ENST00000363205 127 ntBASIC2.69□□□□□ -1.98
HOXA2O43364 RNU6-478P-201ENST00000363904 110 ntBASIC2.69□□□□□ -1.98
HOXA2O43364 AL450471.1-201ENST00000447509 127 ntBASIC2.69□□□□□ -1.98
HOXA2O43364 MIR4796-201ENST00000580742 81 ntBASIC2.69□□□□□ -1.98
HOXA2O43364 GHRLOS.1-201ENST00000610995 70 ntBASIC2.69□□□□□ -1.98
HOXA2O43364 AGTPBP1-205ENST00000376083 4208 ntAPPRIS P1 TSL 1 (best) BASIC2.69□□□□□ -1.98
HOXA2O43364 OR51A4-202ENST00000641898 4393 ntAPPRIS P1 BASIC2.68□□□□□ -1.98
HOXA2O43364 RNA5SP456-201ENST00000364002 114 ntBASIC2.68□□□□□ -1.98
HOXA2O43364 SNORA16B-201ENST00000364674 135 ntBASIC2.68□□□□□ -1.98
HOXA2O43364 RNU6-205P-201ENST00000390858 107 ntBASIC2.68□□□□□ -1.98
HOXA2O43364 RNA5SP212-201ENST00000391223 107 ntBASIC2.68□□□□□ -1.98
HOXA2O43364 AC023790.1-201ENST00000482174 347 ntBASIC2.68□□□□□ -1.98
HOXA2O43364 RNU6-557P-201ENST00000516842 110 ntBASIC2.68□□□□□ -1.98
HOXA2O43364 AC121758.2-201ENST00000553271 193 ntBASIC2.68□□□□□ -1.98
HOXA2O43364 SAGE1-201ENST00000324447 2952 ntAPPRIS P2 TSL 5 BASIC2.68□□□□□ -1.98
HOXA2O43364 Z82195.2-201ENST00000612348 18351 ntBASIC2.67□□□□□ -1.98
HOXA2O43364 RNU6-53P-201ENST00000365367 106 ntBASIC2.67□□□□□ -1.98
HOXA2O43364 RNU6-811P-201ENST00000384069 107 ntBASIC2.67□□□□□ -1.98
HOXA2O43364 RNU6ATAC37P-201ENST00000408328 131 ntBASIC2.67□□□□□ -1.98
HOXA2O43364 SNORD88.1-201ENST00000408684 91 ntBASIC2.67□□□□□ -1.98
HOXA2O43364 AC090255.1-201ENST00000495779 349 ntBASIC2.67□□□□□ -1.98
HOXA2O43364 MIR4536-1-201ENST00000583537 88 ntBASIC2.67□□□□□ -1.98
HOXA2O43364 FAS-AS1.1-201ENST00000615327 126 ntBASIC2.67□□□□□ -1.98
HOXA2O43364 NEB-203ENST00000397345 26202 ntAPPRIS ALT2 TSL 5 BASIC2.67□□□□□ -1.98
HOXA2O43364 NEB-209ENST00000427231 26202 ntAPPRIS ALT2 TSL 5 BASIC2.67□□□□□ -1.98
HOXA2O43364 AC130466.1-201ENST00000636354 4683 ntTSL 5 BASIC2.67□□□□□ -1.98
HOXA2O43364 RNU6-243P-201ENST00000391140 107 ntBASIC2.66□□□□□ -1.98
HOXA2O43364 RNU6-1254P-201ENST00000391266 104 ntBASIC2.66□□□□□ -1.98
HOXA2O43364 Z98742.3-201ENST00000418637 326 ntBASIC2.66□□□□□ -1.98
HOXA2O43364 RN7SL274P-201ENST00000492268 272 ntBASIC2.66□□□□□ -1.98
HOXA2O43364 AKAP9-203ENST00000359028 12247 ntAPPRIS ALT2 TSL 5 BASIC2.66□□□□□ -1.98
HOXA2O43364 RNU6-439P-201ENST00000384188 106 ntBASIC2.65□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 101.3 ms