Protein–RNA interactions for Protein: A6NHR9

SMCHD1, Structural maintenance of chromosomes flexible hinge domain-containing protein 1, humanhuman

Predictions only

Length 2,005 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1A6NHR9 RNU6-1062P-201ENST00000383908 107 ntBASIC0.96□□□□□ -2.26
SMCHD1A6NHR9 Y_RNA.470-201ENST00000384307 117 ntBASIC0.96□□□□□ -2.26
SMCHD1A6NHR9 RNU6-1065P-201ENST00000384513 106 ntBASIC0.96□□□□□ -2.26
SMCHD1A6NHR9 MTND5P34-201ENST00000568888 325 ntBASIC0.96□□□□□ -2.26
SMCHD1A6NHR9 MIR6835-201ENST00000621552 64 ntBASIC0.96□□□□□ -2.26
SMCHD1A6NHR9 MIR539-201ENST00000365690 78 ntBASIC0.96□□□□□ -2.26
SMCHD1A6NHR9 Y_RNA.630-201ENST00000411370 108 ntBASIC0.96□□□□□ -2.26
SMCHD1A6NHR9 RNU7-21P-201ENST00000459430 62 ntBASIC0.96□□□□□ -2.26
SMCHD1A6NHR9 RNA5SP255-201ENST00000516370 107 ntBASIC0.96□□□□□ -2.26
SMCHD1A6NHR9 RNU6-1258P-201ENST00000516911 111 ntBASIC0.96□□□□□ -2.26
SMCHD1A6NHR9 MIR4804-201ENST00000581683 73 ntBASIC0.96□□□□□ -2.26
SMCHD1A6NHR9 RNU6-978P-201ENST00000364371 103 ntBASIC0.95□□□□□ -2.26
SMCHD1A6NHR9 SNORA25.7-201ENST00000364375 127 ntBASIC0.95□□□□□ -2.26
SMCHD1A6NHR9 SNORA40-201ENST00000388090 126 ntBASIC0.95□□□□□ -2.26
SMCHD1A6NHR9 AC063976.4-201ENST00000421971 163 ntBASIC0.95□□□□□ -2.26
SMCHD1A6NHR9 AC211469.2-201ENST00000605461 205 ntBASIC0.95□□□□□ -2.26
SMCHD1A6NHR9 AC012676.2-201ENST00000619258 186 ntBASIC0.95□□□□□ -2.26
SMCHD1A6NHR9 Y_RNA.464-201ENST00000384282 110 ntBASIC0.94□□□□□ -2.26
SMCHD1A6NHR9 MIR18B-201ENST00000454574 71 ntBASIC0.94□□□□□ -2.26
SMCHD1A6NHR9 AC004148.1-201ENST00000571506 398 ntTSL 5 BASIC0.94□□□□□ -2.26
SMCHD1A6NHR9 AC010487.4-201ENST00000637027 61 ntBASIC0.94□□□□□ -2.26
SMCHD1A6NHR9 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC0.94□□□□□ -2.26
SMCHD1A6NHR9 AC108866.1-201ENST00000503073 2339 ntTSL 5 BASIC0.94□□□□□ -2.26
SMCHD1A6NHR9 Y_RNA.42-201ENST00000362660 108 ntBASIC0.94□□□□□ -2.26
SMCHD1A6NHR9 Y_RNA.346-201ENST00000365385 112 ntBASIC0.94□□□□□ -2.26
SMCHD1A6NHR9 MIR608-201ENST00000384820 100 ntBASIC0.94□□□□□ -2.26
SMCHD1A6NHR9 RNU6-1168P-201ENST00000390831 104 ntBASIC0.94□□□□□ -2.26
SMCHD1A6NHR9 HMGN1P33-201ENST00000432945 451 ntBASIC0.94□□□□□ -2.26
SMCHD1A6NHR9 RNU6-772P-201ENST00000516042 105 ntBASIC0.94□□□□□ -2.26
SMCHD1A6NHR9 Y_RNA.563-201ENST00000384707 108 ntBASIC0.93□□□□□ -2.26
SMCHD1A6NHR9 MIR618-201ENST00000385287 98 ntBASIC0.93□□□□□ -2.26
SMCHD1A6NHR9 RNA5SP95-201ENST00000410319 137 ntBASIC0.93□□□□□ -2.26
SMCHD1A6NHR9 RNU6-1149P-201ENST00000516810 97 ntBASIC0.93□□□□□ -2.26
SMCHD1A6NHR9 RNU6-448P-201ENST00000517052 107 ntBASIC0.93□□□□□ -2.26
SMCHD1A6NHR9 AC024382.1-201ENST00000520224 292 ntTSL 3 BASIC0.93□□□□□ -2.26
SMCHD1A6NHR9 RNU6-369P-201ENST00000362515 102 ntBASIC0.93□□□□□ -2.26
SMCHD1A6NHR9 Y_RNA.71-201ENST00000362892 104 ntBASIC0.93□□□□□ -2.26
SMCHD1A6NHR9 RPS27-201ENST00000368567 350 ntAPPRIS P1 TSL 1 (best) BASIC0.93□□□□□ -2.26
SMCHD1A6NHR9 Y_RNA.440-201ENST00000384120 114 ntBASIC0.93□□□□□ -2.26
SMCHD1A6NHR9 SNORA80D-201ENST00000384488 135 ntBASIC0.93□□□□□ -2.26
SMCHD1A6NHR9 RNU1-119P-201ENST00000391122 165 ntBASIC0.93□□□□□ -2.26
SMCHD1A6NHR9 RNU6-257P-201ENST00000410238 98 ntBASIC0.93□□□□□ -2.26
SMCHD1A6NHR9 AC013248.1-201ENST00000455092 232 ntTSL 3 BASIC0.93□□□□□ -2.26
SMCHD1A6NHR9 RNU7-62P-201ENST00000458856 62 ntBASIC0.93□□□□□ -2.26
SMCHD1A6NHR9 Y_RNA.757-201ENST00000578934 114 ntBASIC0.93□□□□□ -2.26
SMCHD1A6NHR9 HSPE1P19-201ENST00000603327 295 ntBASIC0.93□□□□□ -2.26
SMCHD1A6NHR9 Y_RNA.374-201ENST00000365606 101 ntBASIC0.92□□□□□ -2.26
SMCHD1A6NHR9 SNORA51.10-201ENST00000384418 136 ntBASIC0.92□□□□□ -2.26
SMCHD1A6NHR9 Y_RNA.568-201ENST00000384742 113 ntBASIC0.92□□□□□ -2.26
SMCHD1A6NHR9 RNU7-56P-201ENST00000458744 62 ntBASIC0.92□□□□□ -2.26
SMCHD1A6NHR9 RNU6-977P-201ENST00000516411 103 ntBASIC0.92□□□□□ -2.26
SMCHD1A6NHR9 IGHVIII-67-2-201ENST00000519849 88 ntBASIC0.92□□□□□ -2.26
SMCHD1A6NHR9 MIR6717-201ENST00000622747 73 ntBASIC0.92□□□□□ -2.26
SMCHD1A6NHR9 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC0.92□□□□□ -2.26
SMCHD1A6NHR9 Y_RNA.215-201ENST00000364204 112 ntBASIC0.91□□□□□ -2.26
SMCHD1A6NHR9 MT-TI-201ENST00000387365 69 ntBASIC0.91□□□□□ -2.26
SMCHD1A6NHR9 RNA5SP144-201ENST00000410846 116 ntBASIC0.91□□□□□ -2.26
SMCHD1A6NHR9 uc_338.6-201ENST00000613544 171 ntBASIC0.91□□□□□ -2.26
SMCHD1A6NHR9 SNORD114-2-201ENST00000363953 78 ntBASIC0.91□□□□□ -2.26
SMCHD1A6NHR9 RNU6-22P-201ENST00000384355 107 ntBASIC0.91□□□□□ -2.26
SMCHD1A6NHR9 MIR563-201ENST00000385080 79 ntBASIC0.91□□□□□ -2.26
SMCHD1A6NHR9 RNU6ATAC33P-201ENST00000408647 126 ntBASIC0.91□□□□□ -2.26
SMCHD1A6NHR9 Y_RNA.629-201ENST00000411368 105 ntBASIC0.91□□□□□ -2.26
SMCHD1A6NHR9 RNU7-185P-201ENST00000459215 60 ntBASIC0.91□□□□□ -2.26
SMCHD1A6NHR9 RNA5SP33-201ENST00000516687 98 ntBASIC0.91□□□□□ -2.26
SMCHD1A6NHR9 TUG1_4.1-201ENST00000619464 181 ntBASIC0.91□□□□□ -2.26
SMCHD1A6NHR9 AC021613.1-201ENST00000623880 111 ntBASIC0.91□□□□□ -2.26
SMCHD1A6NHR9 SNORD114-23-201ENST00000363536 72 ntBASIC0.9□□□□□ -2.27
SMCHD1A6NHR9 SNORA18-201ENST00000384416 132 ntBASIC0.9□□□□□ -2.27
SMCHD1A6NHR9 Y_RNA.525-201ENST00000384570 113 ntBASIC0.9□□□□□ -2.27
SMCHD1A6NHR9 MIR206-201ENST00000384872 86 ntBASIC0.9□□□□□ -2.27
SMCHD1A6NHR9 RNU2-51P-201ENST00000410708 197 ntBASIC0.9□□□□□ -2.27
SMCHD1A6NHR9 SNORD67.1-201ENST00000516618 108 ntBASIC0.9□□□□□ -2.27
SMCHD1A6NHR9 SNORD114-10-201ENST00000363409 72 ntBASIC0.89□□□□□ -2.27
SMCHD1A6NHR9 Y_RNA.360-201ENST00000365512 102 ntBASIC0.89□□□□□ -2.27
SMCHD1A6NHR9 MIR518A1-201ENST00000385068 85 ntBASIC0.89□□□□□ -2.27
SMCHD1A6NHR9 RNU6-913P-201ENST00000390913 95 ntBASIC0.89□□□□□ -2.27
SMCHD1A6NHR9 BX276092.1-201ENST00000427368 251 ntBASIC0.89□□□□□ -2.27
SMCHD1A6NHR9 RNY1P13-201ENST00000365030 105 ntBASIC0.89□□□□□ -2.27
SMCHD1A6NHR9 MIR942-201ENST00000401111 86 ntBASIC0.89□□□□□ -2.27
SMCHD1A6NHR9 RNU6ATAC42P-201ENST00000408637 95 ntBASIC0.89□□□□□ -2.27
SMCHD1A6NHR9 RNU6-1194P-201ENST00000516208 104 ntBASIC0.89□□□□□ -2.27
SMCHD1A6NHR9 RNU6-1018P-201ENST00000516577 106 ntBASIC0.89□□□□□ -2.27
SMCHD1A6NHR9 SNORA70.22-201ENST00000517160 124 ntBASIC0.89□□□□□ -2.27
SMCHD1A6NHR9 MIR6516-201ENST00000630554 81 ntBASIC0.89□□□□□ -2.27
SMCHD1A6NHR9 MIR376A2-201ENST00000636782 80 ntBASIC0.89□□□□□ -2.27
SMCHD1A6NHR9 AC096949.1-201ENST00000412047 152 ntBASIC0.88□□□□□ -2.27
SMCHD1A6NHR9 RNU7-102P-201ENST00000458948 62 ntBASIC0.88□□□□□ -2.27
SMCHD1A6NHR9 MIR6513-201ENST00000621188 64 ntBASIC0.88□□□□□ -2.27
SMCHD1A6NHR9 HSBP1P2-201ENST00000299671 229 ntBASIC0.88□□□□□ -2.27
SMCHD1A6NHR9 SNORD115-2-201ENST00000362842 82 ntBASIC0.88□□□□□ -2.27
SMCHD1A6NHR9 RNU6-774P-201ENST00000363238 107 ntBASIC0.88□□□□□ -2.27
SMCHD1A6NHR9 Y_RNA.120-201ENST00000363304 110 ntBASIC0.88□□□□□ -2.27
SMCHD1A6NHR9 SNORD115-20-201ENST00000365099 82 ntBASIC0.88□□□□□ -2.27
SMCHD1A6NHR9 RNU1-36P-201ENST00000365130 165 ntBASIC0.88□□□□□ -2.27
SMCHD1A6NHR9 MIR520H-201ENST00000385126 88 ntBASIC0.88□□□□□ -2.27
SMCHD1A6NHR9 RNU6ATAC31P-201ENST00000408513 126 ntBASIC0.88□□□□□ -2.27
SMCHD1A6NHR9 RNU6-351P-201ENST00000516097 100 ntBASIC0.88□□□□□ -2.27
SMCHD1A6NHR9 MIR4491-201ENST00000581087 68 ntBASIC0.88□□□□□ -2.27
SMCHD1A6NHR9 AC090616.3-202ENST00000583346 205 ntTSL 2 BASIC0.88□□□□□ -2.27
Retrieved 100 of 98,524 protein–RNA pairs in 106.6 ms