Protein–RNA interactions for Protein: Q9Y577

TRIM17, E3 ubiquitin-protein ligase TRIM17, humanhuman

Predictions only

Length 477 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM17Q9Y577 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC21.3■■□□□ 1
TRIM17Q9Y577 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC21.3■■□□□ 1
TRIM17Q9Y577 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC21.3■■□□□ 1
TRIM17Q9Y577 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC21.3■■□□□ 1
TRIM17Q9Y577 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC21.3■■□□□ 1
TRIM17Q9Y577 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
TRIM17Q9Y577 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
TRIM17Q9Y577 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
TRIM17Q9Y577 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC21.29■■□□□ 1
TRIM17Q9Y577 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
TRIM17Q9Y577 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC21.29■■□□□ 1
TRIM17Q9Y577 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC21.29■■□□□ 1
TRIM17Q9Y577 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
TRIM17Q9Y577 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
TRIM17Q9Y577 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC21.29■■□□□ 1
TRIM17Q9Y577 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC21.29■■□□□ 1
TRIM17Q9Y577 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
TRIM17Q9Y577 WWC2-AS2-201ENST00000578387 2183 ntBASIC21.29■■□□□ 1
TRIM17Q9Y577 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
TRIM17Q9Y577 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC21.29■■□□□ 1
TRIM17Q9Y577 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC21.29■■□□□ 1
TRIM17Q9Y577 FCN1-201ENST00000371806 1286 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
TRIM17Q9Y577 GNB2-205ENST00000419828 1285 ntTSL 5 BASIC21.29■■□□□ 1
TRIM17Q9Y577 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC21.29■■□□□ 1
TRIM17Q9Y577 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC21.29■■□□□ 1
TRIM17Q9Y577 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC21.29■■□□□ 1
TRIM17Q9Y577 AC104390.1-201ENST00000555663 520 ntBASIC21.29■■□□□ 1
TRIM17Q9Y577 MIR5100-201ENST00000579544 119 ntBASIC21.29■■□□□ 1
TRIM17Q9Y577 AC007193.2-201ENST00000596807 472 ntTSL 3 BASIC21.29■■□□□ 1
TRIM17Q9Y577 AL022328.4-201ENST00000608025 1001 ntTSL 2 BASIC21.29■■□□□ 1
TRIM17Q9Y577 MED17-221ENST00000639724 2317 ntTSL 5 BASIC21.29■■□□□ 1
TRIM17Q9Y577 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
TRIM17Q9Y577 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
TRIM17Q9Y577 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
TRIM17Q9Y577 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
TRIM17Q9Y577 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
TRIM17Q9Y577 ETV2-204ENST00000403402 1335 ntAPPRIS P3 TSL 1 (best) BASIC21.29■■□□□ 1
TRIM17Q9Y577 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC21.28■■□□□ 1
TRIM17Q9Y577 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
TRIM17Q9Y577 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
TRIM17Q9Y577 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC21.28■■□□□ 1
TRIM17Q9Y577 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC21.28■■□□□ 1
TRIM17Q9Y577 RMND5B-201ENST00000313386 1929 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
TRIM17Q9Y577 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC21.28■■□□□ 1
TRIM17Q9Y577 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC21.28■■□□□ 1
TRIM17Q9Y577 AP000355.1-201ENST00000432032 480 ntTSL 5 BASIC21.28■■□□□ 1
TRIM17Q9Y577 RPL8-207ENST00000528957 1015 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
TRIM17Q9Y577 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC21.28■■□□□ 1
TRIM17Q9Y577 AC011840.4-201ENST00000578471 627 ntBASIC21.28■■□□□ 1
TRIM17Q9Y577 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC21.28■■□□□ 1
TRIM17Q9Y577 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC21.28■■□□□ 1
TRIM17Q9Y577 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
TRIM17Q9Y577 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
TRIM17Q9Y577 USP48-205ENST00000421625 2818 ntTSL 2 BASIC21.28■■□□□ 1
TRIM17Q9Y577 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
TRIM17Q9Y577 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
TRIM17Q9Y577 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC21.27■■□□□ 1
TRIM17Q9Y577 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC21.27■■□□□ 1
TRIM17Q9Y577 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
TRIM17Q9Y577 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
TRIM17Q9Y577 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
TRIM17Q9Y577 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
TRIM17Q9Y577 SFTPD-201ENST00000372292 1281 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
TRIM17Q9Y577 HIST2H3DP1-201ENST00000401004 416 ntBASIC21.27■■□□□ 1
TRIM17Q9Y577 RPSAP43-201ENST00000402237 625 ntBASIC21.27■■□□□ 1
TRIM17Q9Y577 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC21.27■■□□□ 1
TRIM17Q9Y577 C21orf33-205ENST00000427803 1077 ntTSL 2 BASIC21.27■■□□□ 1
TRIM17Q9Y577 LINC01705-201ENST00000438158 562 ntTSL 2 BASIC21.27■■□□□ 1
TRIM17Q9Y577 KIRREL3-AS1-201ENST00000548204 586 ntTSL 3 BASIC21.27■■□□□ 1
TRIM17Q9Y577 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC21.27■■□□□ 1
TRIM17Q9Y577 AC027601.4-201ENST00000611259 610 ntBASIC21.27■■□□□ 1
TRIM17Q9Y577 AC083906.6-201ENST00000641366 219 ntBASIC21.27■■□□□ 1
TRIM17Q9Y577 AC079781.4-201ENST00000641908 219 ntBASIC21.27■■□□□ 1
TRIM17Q9Y577 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC21.27■■□□□ 1
TRIM17Q9Y577 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC21.27■■□□□ 1
TRIM17Q9Y577 AP005212.1-201ENST00000581547 1997 ntBASIC21.27■□□□□ 0.99
TRIM17Q9Y577 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC21.26■□□□□ 0.99
TRIM17Q9Y577 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
TRIM17Q9Y577 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC21.26■□□□□ 0.99
TRIM17Q9Y577 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC21.26■□□□□ 0.99
TRIM17Q9Y577 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
TRIM17Q9Y577 GPX1P2-201ENST00000429271 606 ntBASIC21.26■□□□□ 0.99
TRIM17Q9Y577 ZNF295-AS1-202ENST00000429739 783 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
TRIM17Q9Y577 AC007364.1-201ENST00000449714 1022 ntTSL 2 BASIC21.26■□□□□ 0.99
TRIM17Q9Y577 SCARNA2-201ENST00000458748 420 ntBASIC21.26■□□□□ 0.99
TRIM17Q9Y577 AP005233.2-201ENST00000561588 372 ntTSL 3 BASIC21.26■□□□□ 0.99
TRIM17Q9Y577 AC011511.2-201ENST00000592893 918 ntTSL 3 BASIC21.26■□□□□ 0.99
TRIM17Q9Y577 AL356488.2-201ENST00000602755 427 ntBASIC21.26■□□□□ 0.99
TRIM17Q9Y577 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
TRIM17Q9Y577 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC21.26■□□□□ 0.99
TRIM17Q9Y577 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
TRIM17Q9Y577 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC21.26■□□□□ 0.99
TRIM17Q9Y577 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC21.26■□□□□ 0.99
TRIM17Q9Y577 PBK-203ENST00000522944 1499 ntTSL 2 BASIC21.26■□□□□ 0.99
TRIM17Q9Y577 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
TRIM17Q9Y577 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
TRIM17Q9Y577 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
TRIM17Q9Y577 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC21.25■□□□□ 0.99
TRIM17Q9Y577 TEX30-206ENST00000376032 1165 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
TRIM17Q9Y577 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC21.25■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 29.5 ms