Protein–RNA interactions for Protein: Q9UQ90

SPG7, Paraplegin, humanhuman

Predictions only

Length 795 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7Q9UQ90 AL732314.6-201ENST00000627721 484 ntTSL 4 BASIC24.63■■□□□ 1.53
SPG7Q9UQ90 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC24.63■■□□□ 1.53
SPG7Q9UQ90 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC24.63■■□□□ 1.53
SPG7Q9UQ90 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
SPG7Q9UQ90 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC24.62■■□□□ 1.53
SPG7Q9UQ90 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
SPG7Q9UQ90 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
SPG7Q9UQ90 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC24.62■■□□□ 1.53
SPG7Q9UQ90 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC24.62■■□□□ 1.53
SPG7Q9UQ90 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC24.62■■□□□ 1.53
SPG7Q9UQ90 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
SPG7Q9UQ90 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
SPG7Q9UQ90 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC24.62■■□□□ 1.53
SPG7Q9UQ90 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC24.62■■□□□ 1.53
SPG7Q9UQ90 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
SPG7Q9UQ90 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC24.62■■□□□ 1.53
SPG7Q9UQ90 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
SPG7Q9UQ90 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC24.62■■□□□ 1.53
SPG7Q9UQ90 AP2S1-202ENST00000352203 793 ntTSL 2 BASIC24.62■■□□□ 1.53
SPG7Q9UQ90 ENSA-205ENST00000361532 792 ntTSL 2 BASIC24.62■■□□□ 1.53
SPG7Q9UQ90 SSR4P1-202ENST00000429427 967 ntTSL 5 BASIC24.62■■□□□ 1.53
SPG7Q9UQ90 AC069368.1-202ENST00000437723 750 ntAPPRIS P1 TSL 5 BASIC24.62■■□□□ 1.53
SPG7Q9UQ90 NUS1P1-201ENST00000446295 882 ntBASIC24.62■■□□□ 1.53
SPG7Q9UQ90 STK32A-AS1-201ENST00000504297 863 ntTSL 3 BASIC24.62■■□□□ 1.53
SPG7Q9UQ90 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC24.62■■□□□ 1.53
SPG7Q9UQ90 LINC02237-202ENST00000521904 477 ntTSL 3 BASIC24.62■■□□□ 1.53
SPG7Q9UQ90 MPI-205ENST00000562606 1052 ntTSL 3 BASIC24.62■■□□□ 1.53
SPG7Q9UQ90 RNF126P1-202ENST00000569893 925 ntBASIC24.62■■□□□ 1.53
SPG7Q9UQ90 AP2S1-204ENST00000597020 707 ntTSL 1 (best) BASIC24.62■■□□□ 1.53
SPG7Q9UQ90 AC010240.3-201ENST00000607688 395 ntBASIC24.62■■□□□ 1.53
SPG7Q9UQ90 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
SPG7Q9UQ90 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
SPG7Q9UQ90 LINC01521-201ENST00000504184 1943 ntBASIC24.62■■□□□ 1.53
SPG7Q9UQ90 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
SPG7Q9UQ90 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
SPG7Q9UQ90 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC24.62■■□□□ 1.53
SPG7Q9UQ90 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC24.62■■□□□ 1.53
SPG7Q9UQ90 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC24.62■■□□□ 1.53
SPG7Q9UQ90 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC24.62■■□□□ 1.53
SPG7Q9UQ90 KRT18P1-202ENST00000452408 1331 ntBASIC24.61■■□□□ 1.53
SPG7Q9UQ90 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC24.61■■□□□ 1.53
SPG7Q9UQ90 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC24.61■■□□□ 1.53
SPG7Q9UQ90 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
SPG7Q9UQ90 TRAPPC3-202ENST00000373162 1056 ntTSL 2 BASIC24.61■■□□□ 1.53
SPG7Q9UQ90 ACP6-203ENST00000487562 1258 ntTSL 5 BASIC24.61■■□□□ 1.53
SPG7Q9UQ90 KISS1R-203ENST00000606939 964 ntTSL 5 BASIC24.61■■□□□ 1.53
SPG7Q9UQ90 CLEC4G-201ENST00000328853 1360 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
SPG7Q9UQ90 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC24.61■■□□□ 1.53
SPG7Q9UQ90 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC24.61■■□□□ 1.53
SPG7Q9UQ90 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC24.61■■□□□ 1.53
SPG7Q9UQ90 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC24.61■■□□□ 1.53
SPG7Q9UQ90 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
SPG7Q9UQ90 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC24.61■■□□□ 1.53
SPG7Q9UQ90 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
SPG7Q9UQ90 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
SPG7Q9UQ90 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC24.61■■□□□ 1.53
SPG7Q9UQ90 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
SPG7Q9UQ90 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC24.6■■□□□ 1.53
SPG7Q9UQ90 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
SPG7Q9UQ90 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC24.6■■□□□ 1.53
SPG7Q9UQ90 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC24.6■■□□□ 1.53
SPG7Q9UQ90 GLYCTK-201ENST00000305690 1371 ntTSL 5 BASIC24.6■■□□□ 1.53
SPG7Q9UQ90 AGPAT2-201ENST00000371694 1391 ntTSL 1 (best) BASIC24.6■■□□□ 1.53
SPG7Q9UQ90 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC24.6■■□□□ 1.53
SPG7Q9UQ90 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
SPG7Q9UQ90 CNPY2-201ENST00000273308 1214 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
SPG7Q9UQ90 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
SPG7Q9UQ90 CGB7-201ENST00000377280 918 ntAPPRIS P1 TSL 3 BASIC24.6■■□□□ 1.53
SPG7Q9UQ90 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC24.6■■□□□ 1.53
SPG7Q9UQ90 ZNF549-203ENST00000594943 556 ntTSL 4 BASIC24.6■■□□□ 1.53
SPG7Q9UQ90 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC24.6■■□□□ 1.53
SPG7Q9UQ90 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC24.6■■□□□ 1.53
SPG7Q9UQ90 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC24.6■■□□□ 1.53
SPG7Q9UQ90 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC24.6■■□□□ 1.53
SPG7Q9UQ90 PTX4-201ENST00000293922 1422 ntAPPRIS P2 TSL 1 (best) BASIC24.6■■□□□ 1.53
SPG7Q9UQ90 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC24.6■■□□□ 1.53
SPG7Q9UQ90 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC24.59■■□□□ 1.53
SPG7Q9UQ90 AKR1A1-214ENST00000621846 1360 ntAPPRIS P1 TSL 5 BASIC24.59■■□□□ 1.53
SPG7Q9UQ90 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC24.59■■□□□ 1.53
SPG7Q9UQ90 AC004870.1-201ENST00000315132 882 ntBASIC24.59■■□□□ 1.53
SPG7Q9UQ90 MIR564-202ENST00000385049 94 ntBASIC24.59■■□□□ 1.53
SPG7Q9UQ90 AC246785.2-201ENST00000432512 513 ntBASIC24.59■■□□□ 1.53
SPG7Q9UQ90 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC24.59■■□□□ 1.53
SPG7Q9UQ90 ELP6-205ENST00000439305 880 ntTSL 2 BASIC24.59■■□□□ 1.53
SPG7Q9UQ90 ENO1-AS1-201ENST00000442636 456 ntTSL 2 BASIC24.59■■□□□ 1.53
SPG7Q9UQ90 TTTY14-203ENST00000447937 920 ntTSL 3 BASIC24.59■■□□□ 1.53
SPG7Q9UQ90 UNC93B7-201ENST00000509439 705 ntBASIC24.59■■□□□ 1.53
SPG7Q9UQ90 TMIGD2-202ENST00000595645 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC24.59■■□□□ 1.53
SPG7Q9UQ90 LITAF-220ENST00000620789 692 ntTSL 5 BASIC24.59■■□□□ 1.53
SPG7Q9UQ90 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC24.59■■□□□ 1.53
SPG7Q9UQ90 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC24.59■■□□□ 1.53
SPG7Q9UQ90 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
SPG7Q9UQ90 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC24.59■■□□□ 1.53
SPG7Q9UQ90 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC24.59■■□□□ 1.53
SPG7Q9UQ90 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC24.58■■□□□ 1.53
SPG7Q9UQ90 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.53
SPG7Q9UQ90 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.53
SPG7Q9UQ90 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.53
SPG7Q9UQ90 ELANE-201ENST00000263621 920 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.53
SPG7Q9UQ90 TBC1D7-202ENST00000356436 1116 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.53
Retrieved 100 of 98,524 protein–RNA pairs in 24.4 ms