Protein–RNA interactions for Protein: Q96FL8

SLC47A1, Multidrug and toxin extrusion protein 1, humanhuman

Predictions only

Length 570 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC47A1Q96FL8 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
SLC47A1Q96FL8 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
SLC47A1Q96FL8 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
SLC47A1Q96FL8 COBL-210ENST00000632460 1941 ntTSL 5 BASIC17.8■□□□□ 0.44
SLC47A1Q96FL8 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
SLC47A1Q96FL8 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
SLC47A1Q96FL8 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC17.8■□□□□ 0.44
SLC47A1Q96FL8 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
SLC47A1Q96FL8 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
SLC47A1Q96FL8 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
SLC47A1Q96FL8 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
SLC47A1Q96FL8 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
SLC47A1Q96FL8 HTR7P1-202ENST00000624664 4411 ntBASIC17.8■□□□□ 0.44
SLC47A1Q96FL8 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
SLC47A1Q96FL8 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
SLC47A1Q96FL8 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
SLC47A1Q96FL8 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
SLC47A1Q96FL8 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
SLC47A1Q96FL8 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
SLC47A1Q96FL8 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC17.79■□□□□ 0.44
SLC47A1Q96FL8 AP006587.1-201ENST00000534129 1502 ntBASIC17.79■□□□□ 0.44
SLC47A1Q96FL8 PDE3B-201ENST00000282096 6076 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
SLC47A1Q96FL8 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
SLC47A1Q96FL8 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC17.79■□□□□ 0.44
SLC47A1Q96FL8 SLC29A4P2-201ENST00000504749 1089 ntBASIC17.79■□□□□ 0.44
SLC47A1Q96FL8 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC17.79■□□□□ 0.44
SLC47A1Q96FL8 RGMA-211ENST00000557420 989 ntTSL 3 BASIC17.79■□□□□ 0.44
SLC47A1Q96FL8 AC142086.2-201ENST00000569753 217 ntBASIC17.79■□□□□ 0.44
SLC47A1Q96FL8 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC17.79■□□□□ 0.44
SLC47A1Q96FL8 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC17.79■□□□□ 0.44
SLC47A1Q96FL8 AC104771.1-201ENST00000603335 964 ntBASIC17.79■□□□□ 0.44
SLC47A1Q96FL8 AC120498.8-201ENST00000614275 531 ntBASIC17.79■□□□□ 0.44
SLC47A1Q96FL8 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
SLC47A1Q96FL8 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
SLC47A1Q96FL8 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
SLC47A1Q96FL8 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
SLC47A1Q96FL8 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
SLC47A1Q96FL8 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC17.79■□□□□ 0.44
SLC47A1Q96FL8 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
SLC47A1Q96FL8 CD276-201ENST00000318424 2738 ntTSL 5 BASIC17.78■□□□□ 0.44
SLC47A1Q96FL8 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
SLC47A1Q96FL8 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
SLC47A1Q96FL8 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
SLC47A1Q96FL8 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
SLC47A1Q96FL8 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC17.78■□□□□ 0.44
SLC47A1Q96FL8 ADAMTS7-201ENST00000388820 5490 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
SLC47A1Q96FL8 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
SLC47A1Q96FL8 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC17.78■□□□□ 0.44
SLC47A1Q96FL8 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
SLC47A1Q96FL8 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
SLC47A1Q96FL8 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
SLC47A1Q96FL8 HEBP2-204ENST00000607197 10014 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
SLC47A1Q96FL8 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC17.78■□□□□ 0.44
SLC47A1Q96FL8 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
SLC47A1Q96FL8 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
SLC47A1Q96FL8 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
SLC47A1Q96FL8 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC17.78■□□□□ 0.44
SLC47A1Q96FL8 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
SLC47A1Q96FL8 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC17.78■□□□□ 0.44
SLC47A1Q96FL8 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC17.78■□□□□ 0.44
SLC47A1Q96FL8 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
SLC47A1Q96FL8 NUP153-202ENST00000537253 6030 ntAPPRIS ALT2 TSL 2 BASIC17.78■□□□□ 0.44
SLC47A1Q96FL8 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
SLC47A1Q96FL8 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
SLC47A1Q96FL8 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
SLC47A1Q96FL8 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
SLC47A1Q96FL8 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
SLC47A1Q96FL8 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC17.77■□□□□ 0.44
SLC47A1Q96FL8 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
SLC47A1Q96FL8 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
SLC47A1Q96FL8 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC17.77■□□□□ 0.44
SLC47A1Q96FL8 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
SLC47A1Q96FL8 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.44
SLC47A1Q96FL8 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC17.77■□□□□ 0.44
SLC47A1Q96FL8 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
SLC47A1Q96FL8 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
SLC47A1Q96FL8 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
SLC47A1Q96FL8 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
SLC47A1Q96FL8 MAPK8IP3-201ENST00000250894 5661 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
SLC47A1Q96FL8 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
SLC47A1Q96FL8 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC17.77■□□□□ 0.44
SLC47A1Q96FL8 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
SLC47A1Q96FL8 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
SLC47A1Q96FL8 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC17.77■□□□□ 0.44
SLC47A1Q96FL8 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC17.77■□□□□ 0.44
SLC47A1Q96FL8 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
SLC47A1Q96FL8 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
SLC47A1Q96FL8 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC17.77■□□□□ 0.44
SLC47A1Q96FL8 ENC1-201ENST00000302351 5520 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
SLC47A1Q96FL8 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC17.77■□□□□ 0.44
SLC47A1Q96FL8 PLCG1-202ENST00000373271 7395 ntAPPRIS ALT1 TSL 1 (best) BASIC17.77■□□□□ 0.44
SLC47A1Q96FL8 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.44
SLC47A1Q96FL8 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.43
SLC47A1Q96FL8 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
SLC47A1Q96FL8 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.43
SLC47A1Q96FL8 WAC-202ENST00000347934 2839 ntTSL 5 BASIC17.76■□□□□ 0.43
SLC47A1Q96FL8 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC17.76■□□□□ 0.43
SLC47A1Q96FL8 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
SLC47A1Q96FL8 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC17.76■□□□□ 0.43
SLC47A1Q96FL8 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC17.76■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 49.8 ms