Protein–RNA interactions for Protein: Q8N3V7

SYNPO, Synaptopodin, humanhuman

Predictions only

Length 929 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPOQ8N3V7 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC19.16■□□□□ 0.66
SYNPOQ8N3V7 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
SYNPOQ8N3V7 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
SYNPOQ8N3V7 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
SYNPOQ8N3V7 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
SYNPOQ8N3V7 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
SYNPOQ8N3V7 AL162741.1-201ENST00000565563 1558 ntBASIC19.15■□□□□ 0.66
SYNPOQ8N3V7 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
SYNPOQ8N3V7 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
SYNPOQ8N3V7 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
SYNPOQ8N3V7 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
SYNPOQ8N3V7 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC19.15■□□□□ 0.66
SYNPOQ8N3V7 KCNK7-202ENST00000342202 1283 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
SYNPOQ8N3V7 RPS14-203ENST00000407193 784 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
SYNPOQ8N3V7 CHCHD2P8-201ENST00000429873 447 ntBASIC19.15■□□□□ 0.66
SYNPOQ8N3V7 AC246785.2-201ENST00000432512 513 ntBASIC19.15■□□□□ 0.66
SYNPOQ8N3V7 HLA-F-220ENST00000434407 884 ntBASIC19.15■□□□□ 0.66
SYNPOQ8N3V7 AP002383.4-201ENST00000442518 975 ntBASIC19.15■□□□□ 0.66
SYNPOQ8N3V7 MCCD1P1-208ENST00000445732 328 ntBASIC19.15■□□□□ 0.66
SYNPOQ8N3V7 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC19.15■□□□□ 0.66
SYNPOQ8N3V7 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC19.15■□□□□ 0.66
SYNPOQ8N3V7 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC19.15■□□□□ 0.66
SYNPOQ8N3V7 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC19.15■□□□□ 0.66
SYNPOQ8N3V7 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC19.15■□□□□ 0.66
SYNPOQ8N3V7 KISS1R-203ENST00000606939 964 ntTSL 5 BASIC19.15■□□□□ 0.66
SYNPOQ8N3V7 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC19.15■□□□□ 0.66
SYNPOQ8N3V7 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC19.15■□□□□ 0.66
SYNPOQ8N3V7 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
SYNPOQ8N3V7 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC19.15■□□□□ 0.66
SYNPOQ8N3V7 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
SYNPOQ8N3V7 TCF3P1-201ENST00000423021 1937 ntBASIC19.15■□□□□ 0.66
SYNPOQ8N3V7 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC19.15■□□□□ 0.66
SYNPOQ8N3V7 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
SYNPOQ8N3V7 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
SYNPOQ8N3V7 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
SYNPOQ8N3V7 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC19.15■□□□□ 0.66
SYNPOQ8N3V7 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.66
SYNPOQ8N3V7 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC19.14■□□□□ 0.66
SYNPOQ8N3V7 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC19.14■□□□□ 0.66
SYNPOQ8N3V7 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC19.14■□□□□ 0.65
SYNPOQ8N3V7 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
SYNPOQ8N3V7 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.65
SYNPOQ8N3V7 AL845331.1-201ENST00000424978 1190 ntBASIC19.14■□□□□ 0.65
SYNPOQ8N3V7 ACY1-210ENST00000494103 1298 ntTSL 3 BASIC19.14■□□□□ 0.65
SYNPOQ8N3V7 NAA38-203ENST00000575071 553 ntTSL 2 BASIC19.14■□□□□ 0.65
SYNPOQ8N3V7 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
SYNPOQ8N3V7 TNNT1-204ENST00000585321 995 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.65
SYNPOQ8N3V7 IL11-204ENST00000590625 1028 ntTSL 2 BASIC19.14■□□□□ 0.65
SYNPOQ8N3V7 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC19.14■□□□□ 0.65
SYNPOQ8N3V7 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
SYNPOQ8N3V7 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
SYNPOQ8N3V7 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
SYNPOQ8N3V7 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
SYNPOQ8N3V7 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
SYNPOQ8N3V7 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC19.13■□□□□ 0.65
SYNPOQ8N3V7 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
SYNPOQ8N3V7 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC19.13■□□□□ 0.65
SYNPOQ8N3V7 PGLS-201ENST00000252603 1028 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
SYNPOQ8N3V7 PPIH-202ENST00000372549 327 ntTSL 3 BASIC19.13■□□□□ 0.65
SYNPOQ8N3V7 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
SYNPOQ8N3V7 SEC1P-202ENST00000473944 940 ntBASIC19.13■□□□□ 0.65
SYNPOQ8N3V7 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC19.13■□□□□ 0.65
SYNPOQ8N3V7 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC19.13■□□□□ 0.65
SYNPOQ8N3V7 LINC01582-202ENST00000561215 452 ntTSL 4 BASIC19.13■□□□□ 0.65
SYNPOQ8N3V7 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC19.13■□□□□ 0.65
SYNPOQ8N3V7 AP002414.4-201ENST00000589764 1148 ntBASIC19.13■□□□□ 0.65
SYNPOQ8N3V7 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
SYNPOQ8N3V7 AC124016.1-202ENST00000609575 619 ntTSL 2 BASIC19.13■□□□□ 0.65
SYNPOQ8N3V7 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
SYNPOQ8N3V7 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
SYNPOQ8N3V7 BEAN1-211ENST00000622872 1171 ntAPPRIS P2 TSL 5 BASIC19.13■□□□□ 0.65
SYNPOQ8N3V7 TP53I11-223ENST00000627720 195 ntTSL 5 BASIC19.13■□□□□ 0.65
SYNPOQ8N3V7 AMACR-205ENST00000426255 1316 ntTSL 2 BASIC19.13■□□□□ 0.65
SYNPOQ8N3V7 NAA50-209ENST00000497525 1385 ntTSL 2 BASIC19.13■□□□□ 0.65
SYNPOQ8N3V7 MYOG-201ENST00000241651 1528 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
SYNPOQ8N3V7 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
SYNPOQ8N3V7 AC036111.1-201ENST00000533973 1582 ntBASIC19.13■□□□□ 0.65
SYNPOQ8N3V7 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC19.13■□□□□ 0.65
SYNPOQ8N3V7 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC19.13■□□□□ 0.65
SYNPOQ8N3V7 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC19.13■□□□□ 0.65
SYNPOQ8N3V7 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC19.13■□□□□ 0.65
SYNPOQ8N3V7 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
SYNPOQ8N3V7 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC19.13■□□□□ 0.65
SYNPOQ8N3V7 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
SYNPOQ8N3V7 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC19.12■□□□□ 0.65
SYNPOQ8N3V7 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
SYNPOQ8N3V7 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC19.12■□□□□ 0.65
SYNPOQ8N3V7 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC19.12■□□□□ 0.65
SYNPOQ8N3V7 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
SYNPOQ8N3V7 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
SYNPOQ8N3V7 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC19.12■□□□□ 0.65
SYNPOQ8N3V7 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC19.12■□□□□ 0.65
SYNPOQ8N3V7 KRT8P3-201ENST00000519669 1449 ntBASIC19.12■□□□□ 0.65
SYNPOQ8N3V7 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
SYNPOQ8N3V7 GTPBP8-208ENST00000619116 1378 ntTSL 5 BASIC19.12■□□□□ 0.65
SYNPOQ8N3V7 INSL3-201ENST00000317306 755 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
SYNPOQ8N3V7 MRPS15-201ENST00000373116 1006 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
SYNPOQ8N3V7 CORT-201ENST00000377049 1130 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
SYNPOQ8N3V7 MIR662-201ENST00000384847 95 ntBASIC19.12■□□□□ 0.65
SYNPOQ8N3V7 TBCB-205ENST00000585746 875 ntTSL 3 BASIC19.12■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 27.6 ms