Protein–RNA interactions for Protein: P52954

LBX1, Transcription factor LBX1, humanhuman

Predictions only

Length 281 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LBX1P52954 MRPL2-201ENST00000230413 899 ntTSL 2 BASIC21.32■■□□□ 1
LBX1P52954 C18orf32-201ENST00000318240 1128 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
LBX1P52954 BAX-203ENST00000354470 433 ntTSL 1 (best) BASIC21.32■■□□□ 1
LBX1P52954 CD99-202ENST00000381180 530 ntTSL 2 BASIC21.32■■□□□ 1
LBX1P52954 AGTRAP-205ENST00000400895 786 ntTSL 2 BASIC21.32■■□□□ 1
LBX1P52954 BAX-206ENST00000415969 540 ntTSL 1 (best) BASIC21.32■■□□□ 1
LBX1P52954 HLA-V-201ENST00000429037 534 ntBASIC21.32■■□□□ 1
LBX1P52954 AFG3L1P-209ENST00000429663 458 ntTSL 3 BASIC21.32■■□□□ 1
LBX1P52954 PTGES3-205ENST00000456859 957 ntTSL 2 BASIC21.32■■□□□ 1
LBX1P52954 AL669831.5-202ENST00000457084 566 ntTSL 4 BASIC21.32■■□□□ 1
LBX1P52954 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC21.32■■□□□ 1
LBX1P52954 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC21.32■■□□□ 1
LBX1P52954 AC138304.1-201ENST00000563841 424 ntTSL 3 BASIC21.32■■□□□ 1
LBX1P52954 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC21.32■■□□□ 1
LBX1P52954 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC21.32■■□□□ 1
LBX1P52954 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC21.32■■□□□ 1
LBX1P52954 AC008735.5-201ENST00000623544 497 ntBASIC21.32■■□□□ 1
LBX1P52954 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC21.32■■□□□ 1
LBX1P52954 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC21.32■■□□□ 1
LBX1P52954 PDE9A-205ENST00000349112 1616 ntTSL 1 (best) BASIC21.32■■□□□ 1
LBX1P52954 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
LBX1P52954 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC21.32■■□□□ 1
LBX1P52954 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC21.32■■□□□ 1
LBX1P52954 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC21.32■■□□□ 1
LBX1P52954 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
LBX1P52954 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC21.31■■□□□ 1
LBX1P52954 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC21.31■■□□□ 1
LBX1P52954 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC21.31■■□□□ 1
LBX1P52954 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
LBX1P52954 CAPN10-208ENST00000404753 2570 ntAPPRIS ALT2 TSL 5 BASIC21.31■■□□□ 1
LBX1P52954 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC21.31■■□□□ 1
LBX1P52954 RAB17-203ENST00000409576 466 ntTSL 3 BASIC21.31■■□□□ 1
LBX1P52954 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC21.31■■□□□ 1
LBX1P52954 AC104135.1-201ENST00000418001 763 ntTSL 5 BASIC21.31■■□□□ 1
LBX1P52954 DDIT4-AS1-201ENST00000491934 847 ntTSL 5 BASIC21.31■■□□□ 1
LBX1P52954 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC21.31■■□□□ 1
LBX1P52954 AC099482.1-201ENST00000563471 481 ntTSL 2 BASIC21.31■■□□□ 1
LBX1P52954 COPE-211ENST00000600932 1144 ntTSL 5 BASIC21.31■■□□□ 1
LBX1P52954 AC093028.1-201ENST00000622998 982 ntBASIC21.31■■□□□ 1
LBX1P52954 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
LBX1P52954 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC21.31■■□□□ 1
LBX1P52954 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
LBX1P52954 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC21.31■■□□□ 1
LBX1P52954 ZNF219-201ENST00000360947 3071 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
LBX1P52954 DCAF15-201ENST00000254337 2278 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
LBX1P52954 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC21.3■■□□□ 1
LBX1P52954 PLK5-205ENST00000642079 1969 ntBASIC21.3■■□□□ 1
LBX1P52954 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
LBX1P52954 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
LBX1P52954 ANKRD54-201ENST00000215941 2184 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
LBX1P52954 AC005281.1-201ENST00000433040 911 ntTSL 5 BASIC21.3■■□□□ 1
LBX1P52954 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC21.3■■□□□ 1
LBX1P52954 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC21.3■■□□□ 1
LBX1P52954 TCTN1-208ENST00000471804 718 ntTSL 3 BASIC21.3■■□□□ 1
LBX1P52954 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC21.3■■□□□ 1
LBX1P52954 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC21.3■■□□□ 1
LBX1P52954 AP006333.1-201ENST00000543817 575 ntTSL 4 BASIC21.3■■□□□ 1
LBX1P52954 MIR4745-201ENST00000577608 62 ntBASIC21.3■■□□□ 1
LBX1P52954 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC21.3■■□□□ 1
LBX1P52954 GZMM-202ENST00000592501 941 ntTSL 3 BASIC21.3■■□□□ 1
LBX1P52954 AC010615.2-202ENST00000597444 832 ntTSL 3 BASIC21.3■■□□□ 1
LBX1P52954 SELENOH-206ENST00000622257 1291 ntAPPRIS ALT1 TSL 5 BASIC21.3■■□□□ 1
LBX1P52954 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
LBX1P52954 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
LBX1P52954 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC21.3■■□□□ 1
LBX1P52954 AP001271.2-201ENST00000624018 1556 ntBASIC21.3■■□□□ 1
LBX1P52954 RABGGTA-202ENST00000399409 2265 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
LBX1P52954 TMEM225B-202ENST00000431679 1314 ntAPPRIS P1 TSL 5 BASIC21.29■■□□□ 1
LBX1P52954 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC21.29■■□□□ 1
LBX1P52954 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC21.29■■□□□ 1
LBX1P52954 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC21.29■■□□□ 1
LBX1P52954 IRX4-202ENST00000505790 2538 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
LBX1P52954 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC21.29■■□□□ 1
LBX1P52954 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC21.29■■□□□ 1
LBX1P52954 ARHGAP8-201ENST00000336963 1487 ntTSL 1 (best) BASIC21.29■■□□□ 1
LBX1P52954 PLGRKT-201ENST00000223864 932 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
LBX1P52954 H3F3C-201ENST00000340398 1057 ntAPPRIS P1 BASIC21.29■■□□□ 1
LBX1P52954 COPE-202ENST00000349893 948 ntTSL 2 BASIC21.29■■□□□ 1
LBX1P52954 C6orf226-201ENST00000408925 552 ntAPPRIS P1 BASIC21.29■■□□□ 1
LBX1P52954 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC21.29■■□□□ 1
LBX1P52954 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC21.29■■□□□ 1
LBX1P52954 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC21.29■■□□□ 1
LBX1P52954 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC21.28■■□□□ 1
LBX1P52954 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC21.28■■□□□ 1
LBX1P52954 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC21.28■■□□□ 1
LBX1P52954 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC21.28■■□□□ 1
LBX1P52954 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC21.28■■□□□ 1
LBX1P52954 RWDD3-201ENST00000263893 1078 ntTSL 1 (best) BASIC21.28■■□□□ 1
LBX1P52954 KLK8-202ENST00000320838 456 ntTSL 5 BASIC21.28■■□□□ 1
LBX1P52954 ETNK1-202ENST00000335148 1083 ntTSL 1 (best) BASIC21.28■■□□□ 1
LBX1P52954 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
LBX1P52954 PNPO-202ENST00000434554 1196 ntTSL 2 BASIC21.28■■□□□ 1
LBX1P52954 FOLR3-201ENST00000442948 805 ntTSL 5 BASIC21.28■■□□□ 1
LBX1P52954 FAM118B-206ENST00000529731 1028 ntTSL 5 BASIC21.28■■□□□ 1
LBX1P52954 DUX4L17-201ENST00000557360 1267 ntBASIC21.28■■□□□ 1
LBX1P52954 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC21.28■■□□□ 1
LBX1P52954 AC105339.3-201ENST00000560043 636 ntBASIC21.28■■□□□ 1
LBX1P52954 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC21.28■■□□□ 1
LBX1P52954 COX5A-206ENST00000568783 571 ntTSL 3 BASIC21.28■■□□□ 1
LBX1P52954 AQP12B-206ENST00000621682 1080 ntAPPRIS ALT2 TSL 5 BASIC21.28■■□□□ 1
Retrieved 100 of 98,524 protein–RNA pairs in 28.4 ms