Protein–RNA interactions for Protein: P41219

PRPH, Peripherin, humanhuman

Predictions only

Length 470 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPHP41219 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC21.31■■□□□ 1
PRPHP41219 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC21.31■■□□□ 1
PRPHP41219 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC21.31■■□□□ 1
PRPHP41219 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
PRPHP41219 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
PRPHP41219 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC21.31■■□□□ 1
PRPHP41219 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
PRPHP41219 AL355075.4-201ENST00000554988 638 ntBASIC21.31■■□□□ 1
PRPHP41219 FITM1-202ENST00000559294 800 ntBASIC21.31■■□□□ 1
PRPHP41219 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC21.31■■□□□ 1
PRPHP41219 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
PRPHP41219 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC21.31■■□□□ 1
PRPHP41219 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
PRPHP41219 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC21.31■■□□□ 1
PRPHP41219 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC21.31■■□□□ 1
PRPHP41219 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC21.31■■□□□ 1
PRPHP41219 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
PRPHP41219 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC21.31■■□□□ 1
PRPHP41219 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC21.31■■□□□ 1
PRPHP41219 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC21.3■■□□□ 1
PRPHP41219 MTMR9LP-203ENST00000426597 1545 ntBASIC21.3■■□□□ 1
PRPHP41219 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC21.3■■□□□ 1
PRPHP41219 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC21.3■■□□□ 1
PRPHP41219 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC21.3■■□□□ 1
PRPHP41219 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC21.3■■□□□ 1
PRPHP41219 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC21.3■■□□□ 1
PRPHP41219 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC21.3■■□□□ 1
PRPHP41219 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
PRPHP41219 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
PRPHP41219 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC21.3■■□□□ 1
PRPHP41219 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC21.3■■□□□ 1
PRPHP41219 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC21.3■■□□□ 1
PRPHP41219 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC21.3■■□□□ 1
PRPHP41219 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC21.3■■□□□ 1
PRPHP41219 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
PRPHP41219 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC21.3■■□□□ 1
PRPHP41219 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC21.3■■□□□ 1
PRPHP41219 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC21.3■■□□□ 1
PRPHP41219 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC21.3■■□□□ 1
PRPHP41219 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC21.3■■□□□ 1
PRPHP41219 TBC1D3P2-202ENST00000577902 1649 ntBASIC21.29■■□□□ 1
PRPHP41219 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC21.29■■□□□ 1
PRPHP41219 COBL-210ENST00000632460 1941 ntTSL 5 BASIC21.29■■□□□ 1
PRPHP41219 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC21.29■■□□□ 1
PRPHP41219 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC21.29■■□□□ 1
PRPHP41219 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
PRPHP41219 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC21.29■■□□□ 1
PRPHP41219 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
PRPHP41219 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
PRPHP41219 NFYC-AS1-201ENST00000606277 1687 ntBASIC21.29■■□□□ 1
PRPHP41219 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
PRPHP41219 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
PRPHP41219 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
PRPHP41219 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC21.29■■□□□ 1
PRPHP41219 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
PRPHP41219 AC008622.2-201ENST00000617006 1229 ntBASIC21.29■■□□□ 1
PRPHP41219 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC21.29■■□□□ 1
PRPHP41219 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC21.29■■□□□ 1
PRPHP41219 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC21.28■■□□□ 1
PRPHP41219 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC21.28■■□□□ 1
PRPHP41219 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC21.28■■□□□ 1
PRPHP41219 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC21.28■■□□□ 1
PRPHP41219 PRR31-201ENST00000371629 978 ntTSL 2 BASIC21.28■■□□□ 1
PRPHP41219 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
PRPHP41219 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC21.28■■□□□ 1
PRPHP41219 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC21.28■■□□□ 1
PRPHP41219 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC21.28■■□□□ 1
PRPHP41219 AP000525.1-201ENST00000608286 694 ntBASIC21.28■■□□□ 1
PRPHP41219 AC066615.1-201ENST00000640911 628 ntBASIC21.28■■□□□ 1
PRPHP41219 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
PRPHP41219 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
PRPHP41219 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
PRPHP41219 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
PRPHP41219 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC21.28■■□□□ 1
PRPHP41219 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC21.27■■□□□ 1
PRPHP41219 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC21.27■■□□□ 1
PRPHP41219 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
PRPHP41219 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC21.27■■□□□ 1
PRPHP41219 AL020996.1-203ENST00000536896 2307 ntBASIC21.27■■□□□ 1
PRPHP41219 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC21.27■■□□□ 1
PRPHP41219 AC093827.2-201ENST00000512654 315 ntBASIC21.27■■□□□ 1
PRPHP41219 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC21.27■■□□□ 1
PRPHP41219 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC21.27■■□□□ 1
PRPHP41219 RCC2P3-201ENST00000418112 1537 ntBASIC21.27■■□□□ 1
PRPHP41219 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC21.27■■□□□ 1
PRPHP41219 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
PRPHP41219 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC21.27■■□□□ 1
PRPHP41219 AL109659.2-201ENST00000606809 1674 ntBASIC21.27■■□□□ 1
PRPHP41219 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC21.27■■□□□ 1
PRPHP41219 SNAI3-AS1-205ENST00000568633 2096 ntBASIC21.27■□□□□ 0.99
PRPHP41219 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
PRPHP41219 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC21.27■□□□□ 0.99
PRPHP41219 ANO7L1-203ENST00000602586 1720 ntBASIC21.26■□□□□ 0.99
PRPHP41219 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC21.26■□□□□ 0.99
PRPHP41219 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC21.26■□□□□ 0.99
PRPHP41219 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC21.26■□□□□ 0.99
PRPHP41219 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC21.26■□□□□ 0.99
PRPHP41219 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
PRPHP41219 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC21.26■□□□□ 0.99
PRPHP41219 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 16.7 ms