Protein–RNA interactions for Protein: P29350

PTPN6, Tyrosine-protein phosphatase non-receptor type 6, humanhuman

Predictions only

Length 595 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN6P29350 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC17.92■□□□□ 0.46
PTPN6P29350 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
PTPN6P29350 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
PTPN6P29350 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
PTPN6P29350 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
PTPN6P29350 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC17.92■□□□□ 0.46
PTPN6P29350 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
PTPN6P29350 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC17.91■□□□□ 0.46
PTPN6P29350 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
PTPN6P29350 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
PTPN6P29350 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
PTPN6P29350 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
PTPN6P29350 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
PTPN6P29350 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC17.91■□□□□ 0.46
PTPN6P29350 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC17.91■□□□□ 0.46
PTPN6P29350 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
PTPN6P29350 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
PTPN6P29350 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC17.91■□□□□ 0.46
PTPN6P29350 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC17.91■□□□□ 0.46
PTPN6P29350 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC17.91■□□□□ 0.46
PTPN6P29350 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
PTPN6P29350 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
PTPN6P29350 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
PTPN6P29350 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC17.91■□□□□ 0.46
PTPN6P29350 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
PTPN6P29350 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC17.91■□□□□ 0.46
PTPN6P29350 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC17.91■□□□□ 0.46
PTPN6P29350 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC17.91■□□□□ 0.46
PTPN6P29350 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC17.91■□□□□ 0.46
PTPN6P29350 C17orf62-238ENST00000585064 1074 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
PTPN6P29350 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC17.91■□□□□ 0.46
PTPN6P29350 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
PTPN6P29350 Z99916.2-201ENST00000604037 246 ntBASIC17.91■□□□□ 0.46
PTPN6P29350 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
PTPN6P29350 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
PTPN6P29350 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
PTPN6P29350 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC17.91■□□□□ 0.46
PTPN6P29350 AC138932.1-201ENST00000534164 6830 ntBASIC17.91■□□□□ 0.46
PTPN6P29350 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC17.91■□□□□ 0.46
PTPN6P29350 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
PTPN6P29350 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
PTPN6P29350 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
PTPN6P29350 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC17.91■□□□□ 0.46
PTPN6P29350 SNAI3-AS1-205ENST00000568633 2096 ntBASIC17.91■□□□□ 0.46
PTPN6P29350 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
PTPN6P29350 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
PTPN6P29350 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC17.9■□□□□ 0.46
PTPN6P29350 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
PTPN6P29350 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC17.9■□□□□ 0.46
PTPN6P29350 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
PTPN6P29350 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
PTPN6P29350 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
PTPN6P29350 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC17.9■□□□□ 0.46
PTPN6P29350 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
PTPN6P29350 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC17.9■□□□□ 0.46
PTPN6P29350 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
PTPN6P29350 AC012618.2-201ENST00000428058 849 ntBASIC17.9■□□□□ 0.46
PTPN6P29350 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
PTPN6P29350 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC17.9■□□□□ 0.46
PTPN6P29350 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC17.9■□□□□ 0.46
PTPN6P29350 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC17.9■□□□□ 0.46
PTPN6P29350 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC17.9■□□□□ 0.46
PTPN6P29350 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC17.9■□□□□ 0.46
PTPN6P29350 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
PTPN6P29350 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
PTPN6P29350 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC17.9■□□□□ 0.46
PTPN6P29350 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
PTPN6P29350 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC17.9■□□□□ 0.46
PTPN6P29350 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
PTPN6P29350 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
PTPN6P29350 AC026471.1-201ENST00000564629 3026 ntBASIC17.9■□□□□ 0.46
PTPN6P29350 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
PTPN6P29350 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
PTPN6P29350 NOC2LP1-202ENST00000452600 2235 ntBASIC17.9■□□□□ 0.46
PTPN6P29350 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
PTPN6P29350 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC17.9■□□□□ 0.46
PTPN6P29350 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
PTPN6P29350 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
PTPN6P29350 AL135905.2-201ENST00000584934 1404 ntBASIC17.89■□□□□ 0.46
PTPN6P29350 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.45
PTPN6P29350 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC17.89■□□□□ 0.45
PTPN6P29350 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC17.89■□□□□ 0.45
PTPN6P29350 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
PTPN6P29350 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
PTPN6P29350 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC17.89■□□□□ 0.45
PTPN6P29350 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
PTPN6P29350 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
PTPN6P29350 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
PTPN6P29350 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC17.89■□□□□ 0.45
PTPN6P29350 RPS2P55-201ENST00000397318 883 ntBASIC17.89■□□□□ 0.45
PTPN6P29350 AC107956.1-201ENST00000494359 873 ntBASIC17.89■□□□□ 0.45
PTPN6P29350 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC17.89■□□□□ 0.45
PTPN6P29350 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.45
PTPN6P29350 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
PTPN6P29350 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC17.89■□□□□ 0.45
PTPN6P29350 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
PTPN6P29350 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
PTPN6P29350 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
PTPN6P29350 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC17.89■□□□□ 0.45
PTPN6P29350 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 26.6 ms