Protein–RNA interactions for Protein: P16112

ACAN, Aggrecan core protein, humanhuman

Predictions only

Length 2,415 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACANP16112 AL157832.3-201ENST00000635764 1005 ntTSL 5 BASIC15.43■□□□□ 0.06
ACANP16112 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
ACANP16112 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
ACANP16112 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
ACANP16112 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC15.43■□□□□ 0.06
ACANP16112 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC15.43■□□□□ 0.06
ACANP16112 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC15.43■□□□□ 0.06
ACANP16112 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
ACANP16112 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
ACANP16112 IMP4-203ENST00000409935 958 ntTSL 5 BASIC15.43■□□□□ 0.06
ACANP16112 AC004832.2-201ENST00000426397 482 ntBASIC15.43■□□□□ 0.06
ACANP16112 AC025162.1-201ENST00000554022 565 ntTSL 4 BASIC15.43■□□□□ 0.06
ACANP16112 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
ACANP16112 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC15.43■□□□□ 0.06
ACANP16112 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
ACANP16112 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC15.42■□□□□ 0.06
ACANP16112 TMEM222-201ENST00000374076 1599 ntAPPRIS P2 TSL 1 (best) BASIC15.42■□□□□ 0.06
ACANP16112 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC15.42■□□□□ 0.06
ACANP16112 MOB1B-202ENST00000396051 1107 ntTSL 2 BASIC15.42■□□□□ 0.06
ACANP16112 MIR503HG-203ENST00000441492 649 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
ACANP16112 STXBP2-222ENST00000612033 1188 ntTSL 5 BASIC15.42■□□□□ 0.06
ACANP16112 ZNF259P1-201ENST00000407656 1365 ntBASIC15.42■□□□□ 0.06
ACANP16112 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC15.42■□□□□ 0.06
ACANP16112 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
ACANP16112 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
ACANP16112 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC15.42■□□□□ 0.06
ACANP16112 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
ACANP16112 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
ACANP16112 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
ACANP16112 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC15.42■□□□□ 0.06
ACANP16112 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
ACANP16112 LINC02138-201ENST00000378340 1326 ntTSL 2 BASIC15.42■□□□□ 0.06
ACANP16112 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
ACANP16112 TM2D1-201ENST00000294613 1250 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
ACANP16112 TM2D1-204ENST00000371180 1248 ntTSL 5 BASIC15.42■□□□□ 0.06
ACANP16112 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC15.42■□□□□ 0.06
ACANP16112 NUS1P2-201ENST00000417358 873 ntBASIC15.42■□□□□ 0.06
ACANP16112 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC15.42■□□□□ 0.06
ACANP16112 AC097532.1-201ENST00000440802 322 ntTSL 2 BASIC15.42■□□□□ 0.06
ACANP16112 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
ACANP16112 AC018558.2-201ENST00000566562 480 ntTSL 3 BASIC15.42■□□□□ 0.06
ACANP16112 MIR3180-5-201ENST00000583743 153 ntBASIC15.42■□□□□ 0.06
ACANP16112 TM2D1-212ENST00000606498 969 ntAPPRIS P1 TSL 5 BASIC15.42■□□□□ 0.06
ACANP16112 AC124864.1-201ENST00000623408 392 ntBASIC15.42■□□□□ 0.06
ACANP16112 CAND2-206ENST00000626378 333 ntTSL 5 BASIC15.42■□□□□ 0.06
ACANP16112 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC15.41■□□□□ 0.06
ACANP16112 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
ACANP16112 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
ACANP16112 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
ACANP16112 SIT1-204ENST00000618781 1317 ntAPPRIS ALT2 TSL 5 BASIC15.41■□□□□ 0.06
ACANP16112 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
ACANP16112 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC15.41■□□□□ 0.06
ACANP16112 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC15.41■□□□□ 0.06
ACANP16112 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC15.41■□□□□ 0.06
ACANP16112 LHX5-AS1-201ENST00000551357 522 ntTSL 2 BASIC15.41■□□□□ 0.06
ACANP16112 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC15.41■□□□□ 0.06
ACANP16112 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
ACANP16112 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC15.41■□□□□ 0.06
ACANP16112 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC15.41■□□□□ 0.06
ACANP16112 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
ACANP16112 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC15.41■□□□□ 0.06
ACANP16112 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC15.41■□□□□ 0.06
ACANP16112 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
ACANP16112 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
ACANP16112 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC15.41■□□□□ 0.06
ACANP16112 MAGED2-206ENST00000375068 2189 ntAPPRIS P2 TSL 1 (best) BASIC15.41■□□□□ 0.06
ACANP16112 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
ACANP16112 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
ACANP16112 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
ACANP16112 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC15.41■□□□□ 0.06
ACANP16112 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
ACANP16112 STX8-201ENST00000306357 1246 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
ACANP16112 CCS-201ENST00000310190 942 ntTSL 5 BASIC15.41■□□□□ 0.06
ACANP16112 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC15.41■□□□□ 0.06
ACANP16112 MVB12A-211ENST00000529939 1091 ntTSL 3 BASIC15.41■□□□□ 0.06
ACANP16112 TEN1-204ENST00000588202 862 ntTSL 3 BASIC15.41■□□□□ 0.06
ACANP16112 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC15.41■□□□□ 0.06
ACANP16112 AL355877.3-201ENST00000622820 899 ntBASIC15.41■□□□□ 0.06
ACANP16112 TREX1-205ENST00000625293 1783 ntBASIC15.41■□□□□ 0.06
ACANP16112 C21orf2-202ENST00000339818 2233 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
ACANP16112 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
ACANP16112 AFDN-201ENST00000344191 5249 ntTSL 5 BASIC15.4■□□□□ 0.06
ACANP16112 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC15.4■□□□□ 0.06
ACANP16112 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC15.4■□□□□ 0.06
ACANP16112 AC099343.3-201ENST00000605834 2503 ntBASIC15.4■□□□□ 0.06
ACANP16112 PSPH-201ENST00000275605 2131 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
ACANP16112 AC092720.2-201ENST00000602388 1665 ntBASIC15.4■□□□□ 0.06
ACANP16112 TMUB1-204ENST00000476627 882 ntAPPRIS P1 TSL 3 BASIC15.4■□□□□ 0.06
ACANP16112 S100A6-205ENST00000496817 673 ntAPPRIS P1 TSL 2 BASIC15.4■□□□□ 0.06
ACANP16112 PAM16-208ENST00000573553 722 ntTSL 2 BASIC15.4■□□□□ 0.06
ACANP16112 MIR3197-201ENST00000582241 73 ntBASIC15.4■□□□□ 0.06
ACANP16112 AC116407.3-201ENST00000623905 1129 ntBASIC15.4■□□□□ 0.06
ACANP16112 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
ACANP16112 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC15.4■□□□□ 0.06
ACANP16112 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
ACANP16112 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC15.4■□□□□ 0.06
ACANP16112 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC15.4■□□□□ 0.06
ACANP16112 TMEM147-201ENST00000222284 899 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
ACANP16112 DGUOK-201ENST00000264093 1144 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
ACANP16112 DGUOK-202ENST00000348222 880 ntTSL 2 BASIC15.39■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 27.5 ms