Protein–RNA interactions for Protein: O60716

CTNND1, Catenin delta-1, humanhuman

Known RBP Predictions only

Length 968 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1O60716 AL512353.2-201ENST00000448759 1962 ntBASIC22.03■■□□□ 1.12
CTNND1O60716 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC22.03■■□□□ 1.12
CTNND1O60716 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
CTNND1O60716 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
CTNND1O60716 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC22.02■■□□□ 1.12
CTNND1O60716 NAA50-209ENST00000497525 1385 ntTSL 2 BASIC22.02■■□□□ 1.12
CTNND1O60716 RCC2P3-201ENST00000418112 1537 ntBASIC22.02■■□□□ 1.12
CTNND1O60716 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC22.02■■□□□ 1.12
CTNND1O60716 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC22.02■■□□□ 1.12
CTNND1O60716 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC22.02■■□□□ 1.12
CTNND1O60716 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
CTNND1O60716 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC22.02■■□□□ 1.12
CTNND1O60716 DHRS4-203ENST00000397075 727 ntTSL 2 BASIC22.02■■□□□ 1.12
CTNND1O60716 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC22.02■■□□□ 1.12
CTNND1O60716 LENG8-AS1-201ENST00000416022 582 ntTSL 3 BASIC22.02■■□□□ 1.12
CTNND1O60716 AC093734.1-201ENST00000416100 242 ntTSL 3 BASIC22.02■■□□□ 1.12
CTNND1O60716 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC22.02■■□□□ 1.12
CTNND1O60716 ANKRD29-202ENST00000585908 846 ntTSL 2 BASIC22.02■■□□□ 1.12
CTNND1O60716 BEAN1-211ENST00000622872 1171 ntAPPRIS P2 TSL 5 BASIC22.02■■□□□ 1.12
CTNND1O60716 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC22.02■■□□□ 1.12
CTNND1O60716 HOXB1-202ENST00000577092 1414 ntBASIC22.02■■□□□ 1.12
CTNND1O60716 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC22.02■■□□□ 1.12
CTNND1O60716 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
CTNND1O60716 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC22.02■■□□□ 1.12
CTNND1O60716 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
CTNND1O60716 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC22.02■■□□□ 1.12
CTNND1O60716 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC22.02■■□□□ 1.12
CTNND1O60716 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC22.02■■□□□ 1.12
CTNND1O60716 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC22.02■■□□□ 1.12
CTNND1O60716 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC22.02■■□□□ 1.12
CTNND1O60716 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC22.02■■□□□ 1.11
CTNND1O60716 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC22.02■■□□□ 1.11
CTNND1O60716 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC22.02■■□□□ 1.11
CTNND1O60716 MYOG-201ENST00000241651 1528 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
CTNND1O60716 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC22.01■■□□□ 1.11
CTNND1O60716 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC22.01■■□□□ 1.11
CTNND1O60716 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC22.01■■□□□ 1.11
CTNND1O60716 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC22.01■■□□□ 1.11
CTNND1O60716 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
CTNND1O60716 PFN1-201ENST00000225655 1291 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
CTNND1O60716 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
CTNND1O60716 DBNDD2-202ENST00000360981 1078 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
CTNND1O60716 PPIH-202ENST00000372549 327 ntTSL 3 BASIC22.01■■□□□ 1.11
CTNND1O60716 TSPY22P-201ENST00000427496 604 ntBASIC22.01■■□□□ 1.11
CTNND1O60716 KRT18P23-201ENST00000435622 1283 ntBASIC22.01■■□□□ 1.11
CTNND1O60716 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
CTNND1O60716 AC104390.1-201ENST00000555663 520 ntBASIC22.01■■□□□ 1.11
CTNND1O60716 MPI-205ENST00000562606 1052 ntTSL 3 BASIC22.01■■□□□ 1.11
CTNND1O60716 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC22.01■■□□□ 1.11
CTNND1O60716 RN7SL510P-201ENST00000581311 263 ntBASIC22.01■■□□□ 1.11
CTNND1O60716 TNNT1-204ENST00000585321 995 ntAPPRIS ALT2 TSL 5 BASIC22.01■■□□□ 1.11
CTNND1O60716 AP000547.2-201ENST00000609641 661 ntTSL 5 BASIC22.01■■□□□ 1.11
CTNND1O60716 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC22.01■■□□□ 1.11
CTNND1O60716 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC22.01■■□□□ 1.11
CTNND1O60716 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
CTNND1O60716 PRKRA-203ENST00000432031 1344 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
CTNND1O60716 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
CTNND1O60716 AC008556.1-201ENST00000610908 2040 ntBASIC22.01■■□□□ 1.11
CTNND1O60716 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC22.01■■□□□ 1.11
CTNND1O60716 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC22.01■■□□□ 1.11
CTNND1O60716 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC22■■□□□ 1.11
CTNND1O60716 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC22■■□□□ 1.11
CTNND1O60716 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC22■■□□□ 1.11
CTNND1O60716 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC22■■□□□ 1.11
CTNND1O60716 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC22■■□□□ 1.11
CTNND1O60716 TREX1-205ENST00000625293 1783 ntBASIC22■■□□□ 1.11
CTNND1O60716 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC22■■□□□ 1.11
CTNND1O60716 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
CTNND1O60716 SUMF2-203ENST00000395435 1287 ntTSL 2 BASIC22■■□□□ 1.11
CTNND1O60716 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC22■■□□□ 1.11
CTNND1O60716 ING5-202ENST00000406941 946 ntAPPRIS ALT1 TSL 1 (best) BASIC22■■□□□ 1.11
CTNND1O60716 RPS14-203ENST00000407193 784 ntAPPRIS P1 TSL 2 BASIC22■■□□□ 1.11
CTNND1O60716 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC22■■□□□ 1.11
CTNND1O60716 NUS1P1-201ENST00000446295 882 ntBASIC22■■□□□ 1.11
CTNND1O60716 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC22■■□□□ 1.11
CTNND1O60716 IL11-204ENST00000590625 1028 ntTSL 2 BASIC22■■□□□ 1.11
CTNND1O60716 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC22■■□□□ 1.11
CTNND1O60716 AL732314.6-201ENST00000627721 484 ntTSL 4 BASIC22■■□□□ 1.11
CTNND1O60716 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC22■■□□□ 1.11
CTNND1O60716 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC22■■□□□ 1.11
CTNND1O60716 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC22■■□□□ 1.11
CTNND1O60716 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC22■■□□□ 1.11
CTNND1O60716 SHBG-201ENST00000340624 1311 ntTSL 1 (best) BASIC22■■□□□ 1.11
CTNND1O60716 PWWP2AP1-201ENST00000429776 2273 ntBASIC22■■□□□ 1.11
CTNND1O60716 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC22■■□□□ 1.11
CTNND1O60716 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC22■■□□□ 1.11
CTNND1O60716 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC21.99■■□□□ 1.11
CTNND1O60716 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC21.99■■□□□ 1.11
CTNND1O60716 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC21.99■■□□□ 1.11
CTNND1O60716 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
CTNND1O60716 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC21.99■■□□□ 1.11
CTNND1O60716 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
CTNND1O60716 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC21.99■■□□□ 1.11
CTNND1O60716 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
CTNND1O60716 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC21.99■■□□□ 1.11
CTNND1O60716 KATNBL1P6-202ENST00000562413 1466 ntBASIC21.99■■□□□ 1.11
CTNND1O60716 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC21.99■■□□□ 1.11
CTNND1O60716 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
CTNND1O60716 AP2S1-202ENST00000352203 793 ntTSL 2 BASIC21.99■■□□□ 1.11
CTNND1O60716 TRAPPC3-202ENST00000373162 1056 ntTSL 2 BASIC21.99■■□□□ 1.11
Retrieved 100 of 98,524 protein–RNA pairs in 56.2 ms