Protein–RNA interactions for Protein: A0A140T963

RNF103-CHMP3, RNF103-CHMP3 readthrough (Fragment), humanhuman

Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF103-CHMP3A0A140T963 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC18.18■□□□□ 0.5
RNF103-CHMP3A0A140T963 KLF2-202ENST00000592003 564 ntTSL 3 BASIC18.18■□□□□ 0.5
RNF103-CHMP3A0A140T963 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
RNF103-CHMP3A0A140T963 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
RNF103-CHMP3A0A140T963 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC18.18■□□□□ 0.5
RNF103-CHMP3A0A140T963 AL121829.2-201ENST00000620908 328 ntBASIC18.18■□□□□ 0.5
RNF103-CHMP3A0A140T963 ANKRD18DP-204ENST00000455355 1975 ntBASIC18.18■□□□□ 0.5
RNF103-CHMP3A0A140T963 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC18.18■□□□□ 0.5
RNF103-CHMP3A0A140T963 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
RNF103-CHMP3A0A140T963 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
RNF103-CHMP3A0A140T963 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
RNF103-CHMP3A0A140T963 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
RNF103-CHMP3A0A140T963 KDM5C-204ENST00000375401 6031 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
RNF103-CHMP3A0A140T963 ZNF697-201ENST00000421812 5041 ntAPPRIS P1 TSL 3 BASIC18.17■□□□□ 0.5
RNF103-CHMP3A0A140T963 PTP4A1-201ENST00000370651 5088 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
RNF103-CHMP3A0A140T963 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
RNF103-CHMP3A0A140T963 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
RNF103-CHMP3A0A140T963 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC18.17■□□□□ 0.5
RNF103-CHMP3A0A140T963 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
RNF103-CHMP3A0A140T963 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
RNF103-CHMP3A0A140T963 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
RNF103-CHMP3A0A140T963 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
RNF103-CHMP3A0A140T963 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
RNF103-CHMP3A0A140T963 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
RNF103-CHMP3A0A140T963 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC18.17■□□□□ 0.5
RNF103-CHMP3A0A140T963 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC18.17■□□□□ 0.5
RNF103-CHMP3A0A140T963 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC18.17■□□□□ 0.5
RNF103-CHMP3A0A140T963 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
RNF103-CHMP3A0A140T963 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
RNF103-CHMP3A0A140T963 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
RNF103-CHMP3A0A140T963 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
RNF103-CHMP3A0A140T963 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC18.17■□□□□ 0.5
RNF103-CHMP3A0A140T963 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC18.17■□□□□ 0.5
RNF103-CHMP3A0A140T963 IPMK-201ENST00000373935 6133 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
RNF103-CHMP3A0A140T963 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
RNF103-CHMP3A0A140T963 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC18.17■□□□□ 0.5
RNF103-CHMP3A0A140T963 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC18.17■□□□□ 0.5
RNF103-CHMP3A0A140T963 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC18.17■□□□□ 0.5
RNF103-CHMP3A0A140T963 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
RNF103-CHMP3A0A140T963 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
RNF103-CHMP3A0A140T963 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
RNF103-CHMP3A0A140T963 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
RNF103-CHMP3A0A140T963 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
RNF103-CHMP3A0A140T963 AC104417.2-201ENST00000562989 1793 ntBASIC18.17■□□□□ 0.5
RNF103-CHMP3A0A140T963 AC020916.1-201ENST00000587762 1774 ntBASIC18.17■□□□□ 0.5
RNF103-CHMP3A0A140T963 C6orf132-201ENST00000341865 6210 ntAPPRIS P2 TSL 5 BASIC18.17■□□□□ 0.5
RNF103-CHMP3A0A140T963 SDHAP1-207ENST00000440850 2000 ntBASIC18.16■□□□□ 0.5
RNF103-CHMP3A0A140T963 AP000997.3-201ENST00000623333 2250 ntBASIC18.16■□□□□ 0.5
RNF103-CHMP3A0A140T963 TMEM65-201ENST00000297632 9029 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
RNF103-CHMP3A0A140T963 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC18.16■□□□□ 0.5
RNF103-CHMP3A0A140T963 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC18.16■□□□□ 0.5
RNF103-CHMP3A0A140T963 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
RNF103-CHMP3A0A140T963 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC18.16■□□□□ 0.5
RNF103-CHMP3A0A140T963 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC18.16■□□□□ 0.5
RNF103-CHMP3A0A140T963 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
RNF103-CHMP3A0A140T963 UNC13A-206ENST00000552293 5314 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
RNF103-CHMP3A0A140T963 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
RNF103-CHMP3A0A140T963 ADGRB2-201ENST00000373655 5400 ntAPPRIS P4 TSL 1 (best) BASIC18.16■□□□□ 0.5
RNF103-CHMP3A0A140T963 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
RNF103-CHMP3A0A140T963 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
RNF103-CHMP3A0A140T963 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC18.16■□□□□ 0.5
RNF103-CHMP3A0A140T963 AL355802.2-201ENST00000402069 882 ntBASIC18.16■□□□□ 0.5
RNF103-CHMP3A0A140T963 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC18.16■□□□□ 0.5
RNF103-CHMP3A0A140T963 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC18.16■□□□□ 0.5
RNF103-CHMP3A0A140T963 KRT18P16-201ENST00000510337 1294 ntBASIC18.16■□□□□ 0.5
RNF103-CHMP3A0A140T963 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC18.16■□□□□ 0.5
RNF103-CHMP3A0A140T963 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC18.16■□□□□ 0.5
RNF103-CHMP3A0A140T963 RGMA-211ENST00000557420 989 ntTSL 3 BASIC18.16■□□□□ 0.5
RNF103-CHMP3A0A140T963 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC18.16■□□□□ 0.5
RNF103-CHMP3A0A140T963 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC18.16■□□□□ 0.5
RNF103-CHMP3A0A140T963 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC18.16■□□□□ 0.5
RNF103-CHMP3A0A140T963 BICD1-207ENST00000551848 1962 ntBASIC18.16■□□□□ 0.5
RNF103-CHMP3A0A140T963 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC18.16■□□□□ 0.5
RNF103-CHMP3A0A140T963 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
RNF103-CHMP3A0A140T963 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC18.16■□□□□ 0.5
RNF103-CHMP3A0A140T963 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
RNF103-CHMP3A0A140T963 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC18.16■□□□□ 0.5
RNF103-CHMP3A0A140T963 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
RNF103-CHMP3A0A140T963 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
RNF103-CHMP3A0A140T963 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
RNF103-CHMP3A0A140T963 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC18.16■□□□□ 0.5
RNF103-CHMP3A0A140T963 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
RNF103-CHMP3A0A140T963 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
RNF103-CHMP3A0A140T963 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
RNF103-CHMP3A0A140T963 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
RNF103-CHMP3A0A140T963 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
RNF103-CHMP3A0A140T963 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
RNF103-CHMP3A0A140T963 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC18.15■□□□□ 0.5
RNF103-CHMP3A0A140T963 Z98044.1-201ENST00000632503 1764 ntBASIC18.15■□□□□ 0.5
RNF103-CHMP3A0A140T963 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC18.15■□□□□ 0.5
RNF103-CHMP3A0A140T963 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC18.15■□□□□ 0.5
RNF103-CHMP3A0A140T963 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
RNF103-CHMP3A0A140T963 C10orf76-201ENST00000311122 724 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
RNF103-CHMP3A0A140T963 TREX2-204ENST00000370212 861 ntTSL 5 BASIC18.15■□□□□ 0.5
RNF103-CHMP3A0A140T963 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
RNF103-CHMP3A0A140T963 EGFL7-202ENST00000371698 1282 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
RNF103-CHMP3A0A140T963 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
RNF103-CHMP3A0A140T963 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC18.15■□□□□ 0.5
RNF103-CHMP3A0A140T963 TUBB8P6-201ENST00000436895 1288 ntBASIC18.15■□□□□ 0.5
RNF103-CHMP3A0A140T963 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC18.15■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 21.1 ms