Protein–RNA interactions for Protein: A0A0B4J248

TRAV1-1, T-cell receptor alpha variable 1-1 (Fragment), humanhuman

Predictions only

Length 108 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV1-1A0A0B4J248 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
TRAV1-1A0A0B4J248 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
TRAV1-1A0A0B4J248 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC14.75□□□□□ -0.05
TRAV1-1A0A0B4J248 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC14.75□□□□□ -0.05
TRAV1-1A0A0B4J248 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
TRAV1-1A0A0B4J248 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC14.74□□□□□ -0.05
TRAV1-1A0A0B4J248 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC14.74□□□□□ -0.05
TRAV1-1A0A0B4J248 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
TRAV1-1A0A0B4J248 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC14.74□□□□□ -0.05
TRAV1-1A0A0B4J248 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
TRAV1-1A0A0B4J248 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC14.74□□□□□ -0.05
TRAV1-1A0A0B4J248 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC14.74□□□□□ -0.05
TRAV1-1A0A0B4J248 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC14.74□□□□□ -0.05
TRAV1-1A0A0B4J248 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC14.74□□□□□ -0.05
TRAV1-1A0A0B4J248 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
TRAV1-1A0A0B4J248 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
TRAV1-1A0A0B4J248 SPRYD7-201ENST00000361840 3053 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
TRAV1-1A0A0B4J248 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
TRAV1-1A0A0B4J248 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC14.74□□□□□ -0.05
TRAV1-1A0A0B4J248 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
TRAV1-1A0A0B4J248 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
TRAV1-1A0A0B4J248 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC14.74□□□□□ -0.05
TRAV1-1A0A0B4J248 MYC-208ENST00000641036 567 ntBASIC14.74□□□□□ -0.05
TRAV1-1A0A0B4J248 CACNA1B-205ENST00000371363 9758 ntAPPRIS ALT2 TSL 5 BASIC14.74□□□□□ -0.05
TRAV1-1A0A0B4J248 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC14.74□□□□□ -0.05
TRAV1-1A0A0B4J248 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC14.74□□□□□ -0.05
TRAV1-1A0A0B4J248 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC14.74□□□□□ -0.05
TRAV1-1A0A0B4J248 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC14.74□□□□□ -0.05
TRAV1-1A0A0B4J248 ADGRG2-208ENST00000379873 4698 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
TRAV1-1A0A0B4J248 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC14.74□□□□□ -0.05
TRAV1-1A0A0B4J248 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
TRAV1-1A0A0B4J248 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
TRAV1-1A0A0B4J248 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
TRAV1-1A0A0B4J248 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
TRAV1-1A0A0B4J248 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
TRAV1-1A0A0B4J248 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC14.74□□□□□ -0.05
TRAV1-1A0A0B4J248 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
TRAV1-1A0A0B4J248 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC14.74□□□□□ -0.05
TRAV1-1A0A0B4J248 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
TRAV1-1A0A0B4J248 POR-209ENST00000439269 1858 ntTSL 2 BASIC14.74□□□□□ -0.05
TRAV1-1A0A0B4J248 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC14.74□□□□□ -0.05
TRAV1-1A0A0B4J248 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC14.73□□□□□ -0.05
TRAV1-1A0A0B4J248 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
TRAV1-1A0A0B4J248 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC14.73□□□□□ -0.05
TRAV1-1A0A0B4J248 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
TRAV1-1A0A0B4J248 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
TRAV1-1A0A0B4J248 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC14.73□□□□□ -0.05
TRAV1-1A0A0B4J248 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
TRAV1-1A0A0B4J248 PCDHGC5-202ENST00000610789 2763 ntAPPRIS ALT2 BASIC14.73□□□□□ -0.05
TRAV1-1A0A0B4J248 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
TRAV1-1A0A0B4J248 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC14.73□□□□□ -0.05
TRAV1-1A0A0B4J248 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
TRAV1-1A0A0B4J248 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC14.73□□□□□ -0.05
TRAV1-1A0A0B4J248 WWTR1-201ENST00000360632 2103 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
TRAV1-1A0A0B4J248 MAPKAP1-208ENST00000394063 2977 ntTSL 5 BASIC14.73□□□□□ -0.05
TRAV1-1A0A0B4J248 AL136116.3-201ENST00000402907 1138 ntBASIC14.73□□□□□ -0.05
TRAV1-1A0A0B4J248 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
TRAV1-1A0A0B4J248 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
TRAV1-1A0A0B4J248 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
TRAV1-1A0A0B4J248 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
TRAV1-1A0A0B4J248 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
TRAV1-1A0A0B4J248 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
TRAV1-1A0A0B4J248 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC14.73□□□□□ -0.05
TRAV1-1A0A0B4J248 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC14.73□□□□□ -0.05
TRAV1-1A0A0B4J248 KRT8P8-201ENST00000434750 1448 ntBASIC14.73□□□□□ -0.05
TRAV1-1A0A0B4J248 DIAPH1-201ENST00000253811 5789 ntAPPRIS ALT2 TSL 5 BASIC14.73□□□□□ -0.05
TRAV1-1A0A0B4J248 DIAPH1-202ENST00000389054 5795 ntAPPRIS P4 TSL 5 BASIC14.73□□□□□ -0.05
TRAV1-1A0A0B4J248 DIAPH1-204ENST00000398557 5789 ntAPPRIS ALT2 TSL 5 BASIC14.73□□□□□ -0.05
TRAV1-1A0A0B4J248 DMPK-201ENST00000291270 2787 ntAPPRIS P3 TSL 5 BASIC14.73□□□□□ -0.05
TRAV1-1A0A0B4J248 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC14.73□□□□□ -0.05
TRAV1-1A0A0B4J248 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
TRAV1-1A0A0B4J248 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC14.73□□□□□ -0.05
TRAV1-1A0A0B4J248 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC14.73□□□□□ -0.05
TRAV1-1A0A0B4J248 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC14.73□□□□□ -0.05
TRAV1-1A0A0B4J248 IFT74-203ENST00000433700 2119 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
TRAV1-1A0A0B4J248 CCDC112-205ENST00000506442 2145 ntAPPRIS ALT2 TSL 2 BASIC14.72□□□□□ -0.05
TRAV1-1A0A0B4J248 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
TRAV1-1A0A0B4J248 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
TRAV1-1A0A0B4J248 ST3GAL6-214ENST00000483910 1886 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
TRAV1-1A0A0B4J248 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
TRAV1-1A0A0B4J248 HEIH-201ENST00000623091 1652 ntBASIC14.72□□□□□ -0.05
TRAV1-1A0A0B4J248 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC14.72□□□□□ -0.05
TRAV1-1A0A0B4J248 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
TRAV1-1A0A0B4J248 HMGXB3-201ENST00000502717 4974 ntAPPRIS P2 TSL 1 (best) BASIC14.72□□□□□ -0.05
TRAV1-1A0A0B4J248 CCDC154-202ENST00000409671 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
TRAV1-1A0A0B4J248 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
TRAV1-1A0A0B4J248 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC14.72□□□□□ -0.05
TRAV1-1A0A0B4J248 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC14.72□□□□□ -0.05
TRAV1-1A0A0B4J248 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC14.72□□□□□ -0.05
TRAV1-1A0A0B4J248 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
TRAV1-1A0A0B4J248 EDA-201ENST00000338901 1233 ntBASIC14.72□□□□□ -0.05
TRAV1-1A0A0B4J248 AC016405.3-201ENST00000607710 860 ntBASIC14.72□□□□□ -0.05
TRAV1-1A0A0B4J248 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC14.72□□□□□ -0.05
TRAV1-1A0A0B4J248 AL035685.1-201ENST00000636663 812 ntBASIC14.72□□□□□ -0.05
TRAV1-1A0A0B4J248 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
TRAV1-1A0A0B4J248 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC14.72□□□□□ -0.05
TRAV1-1A0A0B4J248 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC14.72□□□□□ -0.05
TRAV1-1A0A0B4J248 CERCAM-201ENST00000372838 2685 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
TRAV1-1A0A0B4J248 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC14.72□□□□□ -0.05
TRAV1-1A0A0B4J248 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC14.72□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 33.3 ms