Protein–RNA interactions for Protein: A0A075B649

Trav13-2, T cell receptor alpha variable 13-2 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13-2A0A075B649 Rab10-201ENSMUST00000021001 3513 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Trav13-2A0A075B649 Espn-212ENSMUST00000105658 2815 ntAPPRIS ALT2 TSL 5 BASIC10.8□□□□□ -0.68
Trav13-2A0A075B649 Maged1-201ENSMUST00000026142 2821 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Trav13-2A0A075B649 Nmnat3-203ENSMUST00000112938 848 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Trav13-2A0A075B649 Gm7638-201ENSMUST00000121348 967 ntBASIC10.8□□□□□ -0.68
Trav13-2A0A075B649 Gm12473-201ENSMUST00000137535 579 ntTSL 5 BASIC10.8□□□□□ -0.68
Trav13-2A0A075B649 Spata3-208ENSMUST00000149469 1110 ntTSL 5 BASIC10.8□□□□□ -0.68
Trav13-2A0A075B649 Gm13647-201ENSMUST00000154654 622 ntTSL 5 BASIC10.8□□□□□ -0.68
Trav13-2A0A075B649 Sae1-203ENSMUST00000210999 1254 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Trav13-2A0A075B649 Gm20049-201ENSMUST00000219950 730 ntBASIC10.8□□□□□ -0.68
Trav13-2A0A075B649 AC164629.5-201ENSMUST00000220387 632 ntBASIC10.8□□□□□ -0.68
Trav13-2A0A075B649 Slc35b2-207ENSMUST00000226086 850 ntBASIC10.8□□□□□ -0.68
Trav13-2A0A075B649 Id1-201ENSMUST00000038368 934 ntAPPRIS P2 TSL 1 (best) BASIC10.8□□□□□ -0.68
Trav13-2A0A075B649 Fbxo6-202ENSMUST00000056965 1163 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Trav13-2A0A075B649 Ube2s-201ENSMUST00000079496 1238 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Trav13-2A0A075B649 Slc6a11-201ENSMUST00000032451 4132 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Trav13-2A0A075B649 Csf3-201ENSMUST00000038886 1413 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Trav13-2A0A075B649 4931440P22Rik-202ENSMUST00000147424 2430 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Trav13-2A0A075B649 Washc1-202ENSMUST00000116556 2887 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Trav13-2A0A075B649 BC024978-204ENSMUST00000179391 1748 ntAPPRIS P3 TSL 5 BASIC10.8□□□□□ -0.68
Trav13-2A0A075B649 Ubqln4-201ENSMUST00000008748 3330 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Trav13-2A0A075B649 Cldn7-201ENSMUST00000018713 1335 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Trav13-2A0A075B649 Fam166b-201ENSMUST00000052829 1349 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Trav13-2A0A075B649 Gm14317-201ENSMUST00000151754 1464 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Trav13-2A0A075B649 Dusp14-205ENSMUST00000164891 1454 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Trav13-2A0A075B649 Cnst-201ENSMUST00000040706 4709 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Trav13-2A0A075B649 Hoxb2-201ENSMUST00000100523 1628 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Trav13-2A0A075B649 Hsf4-202ENSMUST00000163734 1630 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Trav13-2A0A075B649 Trim7-202ENSMUST00000109213 2356 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Trav13-2A0A075B649 Chst10-201ENSMUST00000027249 2975 ntAPPRIS P2 TSL 1 (best) BASIC10.8□□□□□ -0.68
Trav13-2A0A075B649 Tdg-ps-201ENSMUST00000051363 2968 ntBASIC10.8□□□□□ -0.68
Trav13-2A0A075B649 Mcmbp-201ENSMUST00000057557 4237 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Trav13-2A0A075B649 Phf21b-203ENSMUST00000159939 3639 ntAPPRIS P2 TSL 1 (best) BASIC10.79□□□□□ -0.68
Trav13-2A0A075B649 Gm42901-201ENSMUST00000197735 3171 ntBASIC10.79□□□□□ -0.68
Trav13-2A0A075B649 Grina-201ENSMUST00000023225 1693 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Trav13-2A0A075B649 Sntb2-203ENSMUST00000212524 9945 ntAPPRIS P2 TSL 1 (best) BASIC10.79□□□□□ -0.68
Trav13-2A0A075B649 Ggt6-202ENSMUST00000100903 1387 ntTSL 5 BASIC10.79□□□□□ -0.68
Trav13-2A0A075B649 Ruvbl2-205ENSMUST00000211214 2312 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Trav13-2A0A075B649 3110002H16Rik-201ENSMUST00000025276 2170 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Trav13-2A0A075B649 Agbl5-213ENSMUST00000201917 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC10.79□□□□□ -0.68
Trav13-2A0A075B649 Stx7-201ENSMUST00000020174 2502 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Trav13-2A0A075B649 Gpd1l-201ENSMUST00000084853 1436 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Trav13-2A0A075B649 Chd1-202ENSMUST00000024627 7916 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Trav13-2A0A075B649 Atg9a-208ENSMUST00000189702 4110 ntAPPRIS P1 TSL 5 BASIC10.79□□□□□ -0.68
Trav13-2A0A075B649 Speg-203ENSMUST00000113588 1078 ntTSL 5 BASIC10.79□□□□□ -0.68
Trav13-2A0A075B649 Tlx1os-201ENSMUST00000173437 620 ntTSL 3 BASIC10.79□□□□□ -0.68
Trav13-2A0A075B649 Trmt13-210ENSMUST00000198454 880 ntBASIC10.79□□□□□ -0.68
Trav13-2A0A075B649 Dctn3-201ENSMUST00000030158 973 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Trav13-2A0A075B649 Thrsp-201ENSMUST00000043077 1277 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Trav13-2A0A075B649 Trib1-201ENSMUST00000067543 4330 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Trav13-2A0A075B649 Skp1a-203ENSMUST00000109072 1754 ntAPPRIS P1 TSL 5 BASIC10.79□□□□□ -0.68
Trav13-2A0A075B649 Rd3-203ENSMUST00000181512 1760 ntTSL 5 BASIC10.79□□□□□ -0.68
Trav13-2A0A075B649 Tmed8-201ENSMUST00000037418 7409 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Trav13-2A0A075B649 Arfgap2-202ENSMUST00000080008 3068 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Trav13-2A0A075B649 Ets1-206ENSMUST00000184887 2107 ntTSL 5 BASIC10.79□□□□□ -0.68
Trav13-2A0A075B649 Snx14-206ENSMUST00000173039 2970 ntTSL 5 BASIC10.79□□□□□ -0.68
Trav13-2A0A075B649 Nck1-202ENSMUST00000116522 4476 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Trav13-2A0A075B649 Col8a2-201ENSMUST00000070132 4332 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Trav13-2A0A075B649 Dmc1-201ENSMUST00000023065 2192 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Trav13-2A0A075B649 Rnf14-203ENSMUST00000171461 3351 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Trav13-2A0A075B649 Ext2-201ENSMUST00000028623 2871 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Trav13-2A0A075B649 Synj2-210ENSMUST00000115791 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC10.79□□□□□ -0.68
Trav13-2A0A075B649 Cldn6-201ENSMUST00000024699 1506 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Trav13-2A0A075B649 Atxn7l2-203ENSMUST00000117784 2387 ntAPPRIS P2 TSL 1 (best) BASIC10.79□□□□□ -0.68
Trav13-2A0A075B649 Hs3st5-201ENSMUST00000058738 3078 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Trav13-2A0A075B649 Col7a1-202ENSMUST00000112070 9250 ntAPPRIS P1 TSL 5 BASIC10.78□□□□□ -0.68
Trav13-2A0A075B649 Zswim8-204ENSMUST00000223840 5674 ntAPPRIS ALT2 BASIC10.78□□□□□ -0.68
Trav13-2A0A075B649 Fubp3-201ENSMUST00000055244 3648 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Trav13-2A0A075B649 Dnmt3b-210ENSMUST00000109774 4320 ntAPPRIS P4 TSL 1 (best) BASIC10.78□□□□□ -0.68
Trav13-2A0A075B649 Lpin2-213ENSMUST00000156570 1586 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Trav13-2A0A075B649 Fam178b-202ENSMUST00000170295 2286 ntAPPRIS ALT2 TSL 5 BASIC10.78□□□□□ -0.68
Trav13-2A0A075B649 Rhbg-201ENSMUST00000171887 1937 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Trav13-2A0A075B649 Evc-202ENSMUST00000114148 2119 ntAPPRIS ALT2 TSL 1 (best) BASIC10.78□□□□□ -0.68
Trav13-2A0A075B649 Gm45723-201ENSMUST00000212135 1783 ntTSL 5 BASIC10.78□□□□□ -0.68
Trav13-2A0A075B649 Dnmt3b-201ENSMUST00000056495 4318 ntAPPRIS ALT2 TSL 5 BASIC10.78□□□□□ -0.68
Trav13-2A0A075B649 Rabggta-203ENSMUST00000169237 2547 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Trav13-2A0A075B649 4933435F18Rik-202ENSMUST00000154878 2174 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Trav13-2A0A075B649 Atp5g1-203ENSMUST00000107686 691 ntAPPRIS P1 TSL 3 BASIC10.78□□□□□ -0.68
Trav13-2A0A075B649 Rell2-204ENSMUST00000163591 1057 ntTSL 5 BASIC10.78□□□□□ -0.68
Trav13-2A0A075B649 P4ha1-202ENSMUST00000092512 2387 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Trav13-2A0A075B649 Gm16675-202ENSMUST00000208508 2586 ntTSL 2 BASIC10.78□□□□□ -0.68
Trav13-2A0A075B649 Clstn1-201ENSMUST00000039144 3319 ntAPPRIS P3 TSL 1 (best) BASIC10.78□□□□□ -0.68
Trav13-2A0A075B649 Col1a1-201ENSMUST00000001547 5930 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Trav13-2A0A075B649 Col3a1-201ENSMUST00000087883 5564 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Trav13-2A0A075B649 Gabra4-201ENSMUST00000031121 4108 ntAPPRIS P2 TSL 1 (best) BASIC10.78□□□□□ -0.68
Trav13-2A0A075B649 Phka1-204ENSMUST00000119229 6025 ntAPPRIS ALT2 TSL 5 BASIC10.78□□□□□ -0.68
Trav13-2A0A075B649 Vmn1r17-204ENSMUST00000228294 2084 ntAPPRIS ALT2 BASIC10.78□□□□□ -0.68
Trav13-2A0A075B649 Ap1m1-201ENSMUST00000003117 2084 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Trav13-2A0A075B649 Scube1-201ENSMUST00000016907 3991 ntAPPRIS ALT2 TSL 1 (best) BASIC10.78□□□□□ -0.68
Trav13-2A0A075B649 Asic4-202ENSMUST00000113577 2667 ntAPPRIS ALT2 TSL 5 BASIC10.78□□□□□ -0.68
Trav13-2A0A075B649 Hps5-201ENSMUST00000014562 4953 ntAPPRIS P3 TSL 1 (best) BASIC10.78□□□□□ -0.68
Trav13-2A0A075B649 Sidt2-201ENSMUST00000038488 4248 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Trav13-2A0A075B649 Garem2-201ENSMUST00000058045 3865 ntAPPRIS P1 TSL 5 BASIC10.78□□□□□ -0.68
Trav13-2A0A075B649 Gm12359-201ENSMUST00000139017 1399 ntTSL 1 (best) BASIC10.77□□□□□ -0.68
Trav13-2A0A075B649 Cdk9-202ENSMUST00000120105 1565 ntTSL 1 (best) BASIC10.77□□□□□ -0.68
Trav13-2A0A075B649 Gm26568-201ENSMUST00000180496 1594 ntTSL 1 (best) BASIC10.77□□□□□ -0.68
Trav13-2A0A075B649 Tnfrsf1a-201ENSMUST00000032491 2156 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.68
Trav13-2A0A075B649 Camta1-211ENSMUST00000169423 5208 ntAPPRIS P2 TSL 5 BASIC10.77□□□□□ -0.68
Trav13-2A0A075B649 Syt6-201ENSMUST00000090697 4416 ntAPPRIS P1 TSL 5 BASIC10.77□□□□□ -0.68
Trav13-2A0A075B649 Dnajb2-208ENSMUST00000188346 1823 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.68
Retrieved 100 of 76,532 protein–RNA pairs in 24.9 ms