Protein–RNA interactions for Protein: Q9Y6K1

DNMT3A, DNA (cytosine-5)-methyltransferase 3A, humanhuman

Predicted RBP Predictions only

Length 912 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3AQ9Y6K1 AC090897.1-201ENST00000580909 226 ntBASIC2.88□□□□□ -1.95
DNMT3AQ9Y6K1 MIR4506-201ENST00000584693 77 ntBASIC2.88□□□□□ -1.95
DNMT3AQ9Y6K1 AC069503.3-201ENST00000618674 145 ntBASIC2.88□□□□□ -1.95
DNMT3AQ9Y6K1 ZMYM2-203ENST00000382874 10139 ntAPPRIS P1 TSL 1 (best) BASIC2.88□□□□□ -1.95
DNMT3AQ9Y6K1 RNU6-446P-201ENST00000362827 106 ntBASIC2.87□□□□□ -1.95
DNMT3AQ9Y6K1 VTRNA1-1-201ENST00000363120 99 ntBASIC2.87□□□□□ -1.95
DNMT3AQ9Y6K1 RNU6-112P-201ENST00000363599 104 ntBASIC2.87□□□□□ -1.95
DNMT3AQ9Y6K1 SNRPGP12-201ENST00000449481 213 ntBASIC2.87□□□□□ -1.95
DNMT3AQ9Y6K1 RNU7-73P-201ENST00000458743 63 ntBASIC2.87□□□□□ -1.95
DNMT3AQ9Y6K1 RPS29P11-201ENST00000496507 171 ntBASIC2.87□□□□□ -1.95
DNMT3AQ9Y6K1 RNU7-12P-201ENST00000516030 62 ntBASIC2.87□□□□□ -1.95
DNMT3AQ9Y6K1 MIR8065-201ENST00000620577 100 ntBASIC2.87□□□□□ -1.95
DNMT3AQ9Y6K1 ZNF451-208ENST00000491832 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC2.86□□□□□ -1.95
DNMT3AQ9Y6K1 AC009487.2-201ENST00000420969 6821 ntBASIC2.86□□□□□ -1.95
DNMT3AQ9Y6K1 RNU6-1216P-201ENST00000362590 107 ntBASIC2.86□□□□□ -1.95
DNMT3AQ9Y6K1 SNORD113-4-201ENST00000364802 75 ntBASIC2.86□□□□□ -1.95
DNMT3AQ9Y6K1 RNU1-52P-201ENST00000384190 164 ntBASIC2.86□□□□□ -1.95
DNMT3AQ9Y6K1 MIR452-201ENST00000385020 85 ntBASIC2.86□□□□□ -1.95
DNMT3AQ9Y6K1 IL6ST-207ENST00000396816 168 ntTSL 1 (best) BASIC2.86□□□□□ -1.95
DNMT3AQ9Y6K1 RNU4-88P-201ENST00000411220 86 ntBASIC2.86□□□□□ -1.95
DNMT3AQ9Y6K1 AC020594.1-201ENST00000437680 338 ntTSL 3 BASIC2.86□□□□□ -1.95
DNMT3AQ9Y6K1 RNU6-850P-201ENST00000516934 103 ntBASIC2.86□□□□□ -1.95
DNMT3AQ9Y6K1 AC092634.7-201ENST00000621022 103 ntBASIC2.86□□□□□ -1.95
DNMT3AQ9Y6K1 SCARNA15.3-201ENST00000626315 122 ntBASIC2.86□□□□□ -1.95
DNMT3AQ9Y6K1 SCARNA4.1-201ENST00000628597 123 ntBASIC2.86□□□□□ -1.95
DNMT3AQ9Y6K1 MBNL3-205ENST00000370857 8760 ntTSL 5 BASIC2.85□□□□□ -1.95
DNMT3AQ9Y6K1 KIAA1107-202ENST00000636278 4065 ntAPPRIS P1 TSL 5 BASIC2.85□□□□□ -1.95
DNMT3AQ9Y6K1 SNORD45.1-201ENST00000363181 77 ntBASIC2.85□□□□□ -1.95
DNMT3AQ9Y6K1 RNU6-1187P-201ENST00000364771 110 ntBASIC2.85□□□□□ -1.95
DNMT3AQ9Y6K1 MIR516B2-201ENST00000385190 85 ntBASIC2.85□□□□□ -1.95
DNMT3AQ9Y6K1 RN7SKP123-201ENST00000410732 291 ntBASIC2.85□□□□□ -1.95
DNMT3AQ9Y6K1 AL139132.1-201ENST00000431587 344 ntBASIC2.85□□□□□ -1.95
DNMT3AQ9Y6K1 snoU13.27-201ENST00000459278 104 ntBASIC2.85□□□□□ -1.95
DNMT3AQ9Y6K1 RNA5SP437-201ENST00000517249 129 ntBASIC2.85□□□□□ -1.95
DNMT3AQ9Y6K1 MIR3675-201ENST00000583661 73 ntBASIC2.85□□□□□ -1.95
DNMT3AQ9Y6K1 AP000753.3-201ENST00000604083 169 ntBASIC2.85□□□□□ -1.95
DNMT3AQ9Y6K1 ZFAT-AS1_2.1-201ENST00000613742 201 ntBASIC2.85□□□□□ -1.95
DNMT3AQ9Y6K1 AL513423.1-201ENST00000621695 132 ntBASIC2.85□□□□□ -1.95
DNMT3AQ9Y6K1 GS1-279B7.1-204ENST00000641809 378 ntBASIC2.85□□□□□ -1.95
DNMT3AQ9Y6K1 SNORD113.1-201ENST00000363280 73 ntBASIC2.84□□□□□ -1.95
DNMT3AQ9Y6K1 RNU6-340P-201ENST00000364005 107 ntBASIC2.84□□□□□ -1.95
DNMT3AQ9Y6K1 Y_RNA.283-201ENST00000364798 112 ntBASIC2.84□□□□□ -1.95
DNMT3AQ9Y6K1 U8.9-201ENST00000365667 134 ntBASIC2.84□□□□□ -1.95
DNMT3AQ9Y6K1 RNU6-1067P-201ENST00000384752 107 ntBASIC2.84□□□□□ -1.95
DNMT3AQ9Y6K1 MIR548U-201ENST00000390728 81 ntBASIC2.84□□□□□ -1.95
DNMT3AQ9Y6K1 SNORD28B-201ENST00000390993 75 ntBASIC2.84□□□□□ -1.95
DNMT3AQ9Y6K1 SNORA59A-201ENST00000459326 152 ntBASIC2.84□□□□□ -1.95
DNMT3AQ9Y6K1 SCARNA16.3-201ENST00000516595 184 ntBASIC2.84□□□□□ -1.95
DNMT3AQ9Y6K1 AC243994.1-201ENST00000618627 109 ntBASIC2.84□□□□□ -1.95
DNMT3AQ9Y6K1 VSTM2A-OT1-201ENST00000456049 3031 ntTSL 1 (best) BASIC2.84□□□□□ -1.96
DNMT3AQ9Y6K1 ZNF209P-201ENST00000593450 2304 ntBASIC2.84□□□□□ -1.96
DNMT3AQ9Y6K1 HIST1H2APS3-201ENST00000403259 134 ntBASIC2.83□□□□□ -1.96
DNMT3AQ9Y6K1 LINC00393-201ENST00000443621 282 ntTSL 3 BASIC2.83□□□□□ -1.96
DNMT3AQ9Y6K1 SNORA31.25-201ENST00000517242 134 ntBASIC2.83□□□□□ -1.96
DNMT3AQ9Y6K1 MIR548AR-201ENST00000582191 57 ntBASIC2.83□□□□□ -1.96
DNMT3AQ9Y6K1 AL137790.1-201ENST00000634283 177 ntBASIC2.83□□□□□ -1.96
DNMT3AQ9Y6K1 SLC6A15-202ENST00000309283 3108 ntTSL 5 BASIC2.82□□□□□ -1.96
DNMT3AQ9Y6K1 FTX-214ENST00000638437 12267 ntTSL 5 BASIC2.82□□□□□ -1.96
DNMT3AQ9Y6K1 RNY1P2-201ENST00000364820 117 ntBASIC2.82□□□□□ -1.96
DNMT3AQ9Y6K1 RNA5SP344-201ENST00000411081 104 ntBASIC2.82□□□□□ -1.96
DNMT3AQ9Y6K1 RPL23AP6-201ENST00000446637 472 ntBASIC2.82□□□□□ -1.96
DNMT3AQ9Y6K1 AC234781.5-202ENST00000453508 426 ntTSL 3 BASIC2.82□□□□□ -1.96
DNMT3AQ9Y6K1 MIR8055-201ENST00000610739 97 ntBASIC2.82□□□□□ -1.96
DNMT3AQ9Y6K1 MIR8053-201ENST00000613344 75 ntBASIC2.82□□□□□ -1.96
DNMT3AQ9Y6K1 PLD1-217ENST00000627725 174 ntTSL 5 BASIC2.82□□□□□ -1.96
DNMT3AQ9Y6K1 EFR3A-202ENST00000519656 5247 ntTSL 1 (best) BASIC2.81□□□□□ -1.96
DNMT3AQ9Y6K1 SCN1A-219ENST00000641575 12874 ntAPPRIS ALT1 BASIC2.81□□□□□ -1.96
DNMT3AQ9Y6K1 HIF1A-201ENST00000323441 3555 ntTSL 1 (best) BASIC2.81□□□□□ -1.96
DNMT3AQ9Y6K1 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC2.81□□□□□ -1.96
DNMT3AQ9Y6K1 RNY1P13-201ENST00000365030 105 ntBASIC2.81□□□□□ -1.96
DNMT3AQ9Y6K1 RNU6-1237P-201ENST00000384777 107 ntBASIC2.81□□□□□ -1.96
DNMT3AQ9Y6K1 MIR136-201ENST00000385207 82 ntBASIC2.81□□□□□ -1.96
DNMT3AQ9Y6K1 RNU6-604P-201ENST00000390917 100 ntBASIC2.81□□□□□ -1.96
DNMT3AQ9Y6K1 RNA5SP450-201ENST00000411206 102 ntBASIC2.81□□□□□ -1.96
DNMT3AQ9Y6K1 AC105272.1-201ENST00000438604 198 ntBASIC2.81□□□□□ -1.96
DNMT3AQ9Y6K1 AC093850.1-201ENST00000454121 251 ntBASIC2.81□□□□□ -1.96
DNMT3AQ9Y6K1 RPS27P21-201ENST00000486977 252 ntBASIC2.81□□□□□ -1.96
DNMT3AQ9Y6K1 AC133485.1-201ENST00000567176 124 ntBASIC2.81□□□□□ -1.96
DNMT3AQ9Y6K1 AC021506.2-201ENST00000612354 169 ntBASIC2.81□□□□□ -1.96
DNMT3AQ9Y6K1 NEBL-202ENST00000377122 9216 ntTSL 1 (best) BASIC2.8□□□□□ -1.96
DNMT3AQ9Y6K1 AP000648.3-201ENST00000623539 4507 ntBASIC2.8□□□□□ -1.96
DNMT3AQ9Y6K1 SNORA3A-201ENST00000364113 130 ntBASIC2.8□□□□□ -1.96
DNMT3AQ9Y6K1 MIR512-1-201ENST00000384913 84 ntBASIC2.8□□□□□ -1.96
DNMT3AQ9Y6K1 COTL1P1-201ENST00000422309 375 ntBASIC2.8□□□□□ -1.96
DNMT3AQ9Y6K1 BX276092.1-201ENST00000427368 251 ntBASIC2.8□□□□□ -1.96
DNMT3AQ9Y6K1 MIR4500-201ENST00000579472 76 ntBASIC2.8□□□□□ -1.96
DNMT3AQ9Y6K1 MIR466-201ENST00000580653 84 ntBASIC2.8□□□□□ -1.96
DNMT3AQ9Y6K1 SNORD92-201ENST00000585078 85 ntBASIC2.8□□□□□ -1.96
DNMT3AQ9Y6K1 GCNT4-201ENST00000322348 5554 ntAPPRIS P1 BASIC2.8□□□□□ -1.96
DNMT3AQ9Y6K1 WDR3-201ENST00000349139 9974 ntAPPRIS P1 TSL 1 (best) BASIC2.8□□□□□ -1.96
DNMT3AQ9Y6K1 Y_RNA.207-201ENST00000364142 106 ntBASIC2.79□□□□□ -1.96
DNMT3AQ9Y6K1 MIR660-201ENST00000385235 97 ntBASIC2.79□□□□□ -1.96
DNMT3AQ9Y6K1 RNU7-193P-201ENST00000516723 65 ntBASIC2.79□□□□□ -1.96
DNMT3AQ9Y6K1 FOXP2-210ENST00000403559 6415 ntTSL 2 BASIC2.79□□□□□ -1.96
DNMT3AQ9Y6K1 OR4K2-204ENST00000641885 8681 ntAPPRIS P1 BASIC2.79□□□□□ -1.96
DNMT3AQ9Y6K1 KCNIP4-IT1-201ENST00000627566 9848 ntBASIC2.78□□□□□ -1.96
DNMT3AQ9Y6K1 Y_RNA.42-201ENST00000362660 108 ntBASIC2.78□□□□□ -1.96
DNMT3AQ9Y6K1 SNORD36A-201ENST00000362874 73 ntBASIC2.78□□□□□ -1.96
DNMT3AQ9Y6K1 EIF4BP1-201ENST00000554881 351 ntBASIC2.78□□□□□ -1.96
DNMT3AQ9Y6K1 MIR26A1-201ENST00000362205 77 ntBASIC2.77□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 201.5 ms