Protein–RNA interactions for Protein: Q9Y6H5

SNCAIP, Synphilin-1, humanhuman

Predictions only

Length 919 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNCAIPQ9Y6H5 MIR4251-201ENST00000635819 61 ntBASIC2.21□□□□□ -2.06
SNCAIPQ9Y6H5 AP000553.5-201ENST00000641933 54 ntBASIC2.21□□□□□ -2.06
SNCAIPQ9Y6H5 OR2L2-202ENST00000641771 4300 ntAPPRIS P1 BASIC2.21□□□□□ -2.06
SNCAIPQ9Y6H5 RNA5SP37-201ENST00000365420 130 ntBASIC2.2□□□□□ -2.06
SNCAIPQ9Y6H5 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC2.2□□□□□ -2.06
SNCAIPQ9Y6H5 TRAJ11-201ENST00000390526 60 ntAPPRIS P1 BASIC2.2□□□□□ -2.06
SNCAIPQ9Y6H5 MIR676-201ENST00000390702 67 ntBASIC2.2□□□□□ -2.06
SNCAIPQ9Y6H5 AC073127.1-201ENST00000447336 333 ntTSL 3 BASIC2.2□□□□□ -2.06
SNCAIPQ9Y6H5 RNU7-41P-201ENST00000515917 61 ntBASIC2.2□□□□□ -2.06
SNCAIPQ9Y6H5 SNORA25.15-201ENST00000516487 89 ntBASIC2.2□□□□□ -2.06
SNCAIPQ9Y6H5 CYP3A52P-201ENST00000563326 91 ntBASIC2.2□□□□□ -2.06
SNCAIPQ9Y6H5 MIR4299-201ENST00000577899 72 ntBASIC2.2□□□□□ -2.06
SNCAIPQ9Y6H5 MIR8081-201ENST00000611533 95 ntBASIC2.2□□□□□ -2.06
SNCAIPQ9Y6H5 C16orf97-206ENST00000622950 415 ntTSL 2 BASIC2.2□□□□□ -2.06
SNCAIPQ9Y6H5 LRRCC1-202ENST00000414626 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC2.19□□□□□ -2.06
SNCAIPQ9Y6H5 RNU6-342P-201ENST00000384521 104 ntBASIC2.19□□□□□ -2.06
SNCAIPQ9Y6H5 RNU6-321P-201ENST00000410912 106 ntBASIC2.19□□□□□ -2.06
SNCAIPQ9Y6H5 RNU6-602P-201ENST00000411155 105 ntBASIC2.19□□□□□ -2.06
SNCAIPQ9Y6H5 AL161935.2-201ENST00000414627 60 ntBASIC2.19□□□□□ -2.06
SNCAIPQ9Y6H5 HMGN2P19-201ENST00000425149 265 ntBASIC2.19□□□□□ -2.06
SNCAIPQ9Y6H5 MTATP8P2-201ENST00000435212 202 ntBASIC2.19□□□□□ -2.06
SNCAIPQ9Y6H5 SCARNA23-201ENST00000516060 130 ntBASIC2.19□□□□□ -2.06
SNCAIPQ9Y6H5 RNU6-521P-201ENST00000516663 105 ntBASIC2.19□□□□□ -2.06
SNCAIPQ9Y6H5 RNU6-922P-201ENST00000516753 99 ntBASIC2.19□□□□□ -2.06
SNCAIPQ9Y6H5 RNU6-250P-201ENST00000516958 103 ntBASIC2.19□□□□□ -2.06
SNCAIPQ9Y6H5 MIR4694-201ENST00000578534 80 ntBASIC2.19□□□□□ -2.06
SNCAIPQ9Y6H5 MIR2052-201ENST00000636055 55 ntBASIC2.19□□□□□ -2.06
SNCAIPQ9Y6H5 Z97988.1-201ENST00000637697 135 ntBASIC2.19□□□□□ -2.06
SNCAIPQ9Y6H5 MIER3-202ENST00000381199 5188 ntAPPRIS ALT1 TSL 1 (best) BASIC2.19□□□□□ -2.06
SNCAIPQ9Y6H5 FSIP2-206ENST00000611759 3882 ntAPPRIS ALT2 TSL 5 BASIC2.18□□□□□ -2.06
SNCAIPQ9Y6H5 Y_RNA.93-201ENST00000363066 109 ntBASIC2.18□□□□□ -2.06
SNCAIPQ9Y6H5 Y_RNA.107-201ENST00000363190 121 ntBASIC2.18□□□□□ -2.06
SNCAIPQ9Y6H5 RNA5SP160-201ENST00000364866 120 ntBASIC2.18□□□□□ -2.06
SNCAIPQ9Y6H5 SNORA18-201ENST00000384416 132 ntBASIC2.18□□□□□ -2.06
SNCAIPQ9Y6H5 MIR577-201ENST00000385196 96 ntBASIC2.18□□□□□ -2.06
SNCAIPQ9Y6H5 RNU6-679P-201ENST00000391003 106 ntBASIC2.18□□□□□ -2.06
SNCAIPQ9Y6H5 MIR1287-201ENST00000408492 90 ntBASIC2.18□□□□□ -2.06
SNCAIPQ9Y6H5 RNU4-62P-201ENST00000410125 130 ntBASIC2.18□□□□□ -2.06
SNCAIPQ9Y6H5 Y_RNA.601-201ENST00000410500 113 ntBASIC2.18□□□□□ -2.06
SNCAIPQ9Y6H5 AC025033.1-201ENST00000463883 194 ntBASIC2.18□□□□□ -2.06
SNCAIPQ9Y6H5 MIR3935-201ENST00000583472 104 ntBASIC2.18□□□□□ -2.06
SNCAIPQ9Y6H5 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC2.18□□□□□ -2.06
SNCAIPQ9Y6H5 Y_RNA.10-201ENST00000362371 110 ntBASIC2.17□□□□□ -2.06
SNCAIPQ9Y6H5 RNU6-832P-201ENST00000363319 107 ntBASIC2.17□□□□□ -2.06
SNCAIPQ9Y6H5 RNU6-294P-201ENST00000364999 102 ntBASIC2.17□□□□□ -2.06
SNCAIPQ9Y6H5 MIR488-201ENST00000365739 83 ntBASIC2.17□□□□□ -2.06
SNCAIPQ9Y6H5 RNU6-49P-201ENST00000384256 107 ntBASIC2.17□□□□□ -2.06
SNCAIPQ9Y6H5 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC2.17□□□□□ -2.06
SNCAIPQ9Y6H5 HMGN2P38-201ENST00000423806 265 ntBASIC2.17□□□□□ -2.06
SNCAIPQ9Y6H5 RNU6-717P-201ENST00000459076 104 ntBASIC2.17□□□□□ -2.06
SNCAIPQ9Y6H5 MIR7111-201ENST00000619751 72 ntBASIC2.17□□□□□ -2.06
SNCAIPQ9Y6H5 MIR8065-201ENST00000620577 100 ntBASIC2.17□□□□□ -2.06
SNCAIPQ9Y6H5 AL512310.12-203ENST00000640543 90 ntBASIC2.17□□□□□ -2.06
SNCAIPQ9Y6H5 USP53-202ENST00000450251 6072 ntAPPRIS P1 TSL 5 BASIC2.17□□□□□ -2.06
SNCAIPQ9Y6H5 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC2.17□□□□□ -2.06
SNCAIPQ9Y6H5 KIF20B-202ENST00000371728 6419 ntAPPRIS ALT2 TSL 1 (best) BASIC2.17□□□□□ -2.06
SNCAIPQ9Y6H5 SCN7A-201ENST00000409855 7183 ntAPPRIS P1 TSL 1 (best) BASIC2.16□□□□□ -2.06
SNCAIPQ9Y6H5 CEP162-201ENST00000257766 5063 ntTSL 1 (best) BASIC2.16□□□□□ -2.06
SNCAIPQ9Y6H5 SNORD38B-201ENST00000384690 67 ntBASIC2.16□□□□□ -2.06
SNCAIPQ9Y6H5 RNU6-1237P-201ENST00000384777 107 ntBASIC2.16□□□□□ -2.06
SNCAIPQ9Y6H5 RNA5SP338-201ENST00000410495 85 ntBASIC2.16□□□□□ -2.06
SNCAIPQ9Y6H5 SNORA72.7-201ENST00000516349 94 ntBASIC2.16□□□□□ -2.06
SNCAIPQ9Y6H5 SNORD111.1-201ENST00000516421 86 ntBASIC2.16□□□□□ -2.06
SNCAIPQ9Y6H5 SNORD38B-202ENST00000625943 69 ntBASIC2.16□□□□□ -2.06
SNCAIPQ9Y6H5 SI-201ENST00000264382 6011 ntAPPRIS P1 TSL 1 (best) BASIC2.16□□□□□ -2.06
SNCAIPQ9Y6H5 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC2.15□□□□□ -2.07
SNCAIPQ9Y6H5 Y_RNA.220-201ENST00000364244 109 ntBASIC2.15□□□□□ -2.07
SNCAIPQ9Y6H5 AP1B1P2-201ENST00000416196 106 ntBASIC2.15□□□□□ -2.07
SNCAIPQ9Y6H5 AC090844.1-201ENST00000422019 156 ntBASIC2.15□□□□□ -2.07
SNCAIPQ9Y6H5 AL353813.1-201ENST00000440700 253 ntBASIC2.15□□□□□ -2.07
SNCAIPQ9Y6H5 AC009474.2-201ENST00000451383 136 ntBASIC2.15□□□□□ -2.07
SNCAIPQ9Y6H5 RNU1-40P-201ENST00000516816 164 ntBASIC2.15□□□□□ -2.07
SNCAIPQ9Y6H5 RNU1-97P-201ENST00000516872 164 ntBASIC2.15□□□□□ -2.07
SNCAIPQ9Y6H5 MIR4303-201ENST00000581299 66 ntBASIC2.15□□□□□ -2.07
SNCAIPQ9Y6H5 FAS-AS1.2-201ENST00000620386 170 ntBASIC2.15□□□□□ -2.07
SNCAIPQ9Y6H5 ZDBF2-202ENST00000611847 9890 ntTSL 5 BASIC2.15□□□□□ -2.07
SNCAIPQ9Y6H5 SNORD41-201ENST00000386967 70 ntBASIC2.14□□□□□ -2.07
SNCAIPQ9Y6H5 RNU6-1086P-201ENST00000410930 100 ntBASIC2.14□□□□□ -2.07
SNCAIPQ9Y6H5 RPL31P63-201ENST00000422565 375 ntBASIC2.14□□□□□ -2.07
SNCAIPQ9Y6H5 RNU6-795P-201ENST00000516323 103 ntBASIC2.14□□□□□ -2.07
SNCAIPQ9Y6H5 RNU6-158P-201ENST00000517104 100 ntBASIC2.14□□□□□ -2.07
SNCAIPQ9Y6H5 SNORA77B-201ENST00000578179 125 ntBASIC2.14□□□□□ -2.07
SNCAIPQ9Y6H5 MIR4255-201ENST00000579351 72 ntBASIC2.14□□□□□ -2.07
SNCAIPQ9Y6H5 MIR4713-201ENST00000582691 75 ntBASIC2.14□□□□□ -2.07
SNCAIPQ9Y6H5 MIR8074-201ENST00000615081 81 ntBASIC2.14□□□□□ -2.07
SNCAIPQ9Y6H5 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC2.14□□□□□ -2.07
SNCAIPQ9Y6H5 RNY1P7-201ENST00000384743 110 ntBASIC2.13□□□□□ -2.07
SNCAIPQ9Y6H5 RNA5SP489-201ENST00000410986 109 ntBASIC2.13□□□□□ -2.07
SNCAIPQ9Y6H5 RNU7-79P-201ENST00000516082 62 ntBASIC2.13□□□□□ -2.07
SNCAIPQ9Y6H5 RNU6-947P-201ENST00000516264 106 ntBASIC2.13□□□□□ -2.07
SNCAIPQ9Y6H5 AC022254.1-201ENST00000567857 235 ntBASIC2.13□□□□□ -2.07
SNCAIPQ9Y6H5 AL359821.1-201ENST00000605519 182 ntBASIC2.13□□□□□ -2.07
SNCAIPQ9Y6H5 TRAJ36-201ENST00000614481 58 ntAPPRIS P1 BASIC2.13□□□□□ -2.07
SNCAIPQ9Y6H5 MUC15-203ENST00000455601 3156 ntAPPRIS P1 TSL 2 BASIC2.12□□□□□ -2.07
SNCAIPQ9Y6H5 RNA5SP138-201ENST00000365098 114 ntBASIC2.12□□□□□ -2.07
SNCAIPQ9Y6H5 SNORD115-35-201ENST00000365122 82 ntBASIC2.12□□□□□ -2.07
SNCAIPQ9Y6H5 RNU7-2P-201ENST00000516096 62 ntBASIC2.12□□□□□ -2.07
SNCAIPQ9Y6H5 RNU6-1018P-201ENST00000516577 106 ntBASIC2.12□□□□□ -2.07
SNCAIPQ9Y6H5 RNU7-35P-201ENST00000517174 62 ntBASIC2.12□□□□□ -2.07
SNCAIPQ9Y6H5 AC015688.6-201ENST00000577737 104 ntBASIC2.12□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 193.9 ms