Protein–RNA interactions for Protein: Q9UPZ3

HPS5, Hermansky-Pudlak syndrome 5 protein, humanhuman

Predictions only

Length 1,129 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS5Q9UPZ3 SCARNA16.3-201ENST00000516595 184 ntBASIC3.25□□□□□ -1.89
HPS5Q9UPZ3 RNU4ATAC9P-201ENST00000517146 126 ntBASIC3.25□□□□□ -1.89
HPS5Q9UPZ3 MIR4648-201ENST00000580107 72 ntBASIC3.25□□□□□ -1.89
HPS5Q9UPZ3 MIR3064-201ENST00000581130 66 ntBASIC3.25□□□□□ -1.89
HPS5Q9UPZ3 AC104996.3-201ENST00000590718 94 ntBASIC3.25□□□□□ -1.89
HPS5Q9UPZ3 AC067747.1-201ENST00000608026 250 ntBASIC3.25□□□□□ -1.89
HPS5Q9UPZ3 NEAT1_2.1-201ENST00000620525 105 ntBASIC3.25□□□□□ -1.89
HPS5Q9UPZ3 CAPS2-203ENST00000393284 3430 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
HPS5Q9UPZ3 PRKACB-204ENST00000370685 4481 ntAPPRIS P4 TSL 1 (best) BASIC3.25□□□□□ -1.89
HPS5Q9UPZ3 NEDD1-204ENST00000457368 3162 ntTSL 2 BASIC3.24□□□□□ -1.89
HPS5Q9UPZ3 MIR133A1HG-202ENST00000581072 4226 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
HPS5Q9UPZ3 RNU1-58P-201ENST00000362413 163 ntBASIC3.24□□□□□ -1.89
HPS5Q9UPZ3 RNU1-112P-201ENST00000364401 164 ntBASIC3.24□□□□□ -1.89
HPS5Q9UPZ3 SNORD115-31-201ENST00000365318 82 ntBASIC3.24□□□□□ -1.89
HPS5Q9UPZ3 RNU6-132P-201ENST00000383863 107 ntBASIC3.24□□□□□ -1.89
HPS5Q9UPZ3 RNU1-109P-201ENST00000383960 147 ntBASIC3.24□□□□□ -1.89
HPS5Q9UPZ3 RNU6-571P-201ENST00000384128 107 ntBASIC3.24□□□□□ -1.89
HPS5Q9UPZ3 HSPE1P24-201ENST00000450782 238 ntBASIC3.24□□□□□ -1.89
HPS5Q9UPZ3 AL513423.1-201ENST00000621695 132 ntBASIC3.24□□□□□ -1.89
HPS5Q9UPZ3 AC008133.2-201ENST00000624540 351 ntBASIC3.24□□□□□ -1.89
HPS5Q9UPZ3 CHORDC1-205ENST00000529726 4805 ntTSL 2 BASIC3.24□□□□□ -1.89
HPS5Q9UPZ3 AC008781.2-201ENST00000502205 2480 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
HPS5Q9UPZ3 SNORD115-3-201ENST00000363100 82 ntBASIC3.23□□□□□ -1.89
HPS5Q9UPZ3 MIR660-201ENST00000385235 97 ntBASIC3.23□□□□□ -1.89
HPS5Q9UPZ3 MIR154-201ENST00000385243 84 ntBASIC3.23□□□□□ -1.89
HPS5Q9UPZ3 AL138827.1-201ENST00000402666 306 ntBASIC3.23□□□□□ -1.89
HPS5Q9UPZ3 AC015818.7-201ENST00000428754 109 ntBASIC3.23□□□□□ -1.89
HPS5Q9UPZ3 AC093423.1-201ENST00000440817 142 ntBASIC3.23□□□□□ -1.89
HPS5Q9UPZ3 ANKAR-209ENST00000520309 4410 ntAPPRIS P1 TSL 5 BASIC3.23□□□□□ -1.89
HPS5Q9UPZ3 MIR4500-201ENST00000579472 76 ntBASIC3.23□□□□□ -1.89
HPS5Q9UPZ3 SYTL2-230ENST00000634661 6672 ntTSL 5 BASIC3.23□□□□□ -1.89
HPS5Q9UPZ3 PIK3C2G-206ENST00000538779 4963 ntTSL 5 BASIC3.23□□□□□ -1.89
HPS5Q9UPZ3 CLOCK-201ENST00000309964 10304 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
HPS5Q9UPZ3 WWP1P1-201ENST00000466609 2769 ntBASIC3.22□□□□□ -1.89
HPS5Q9UPZ3 RNU6-499P-201ENST00000365615 107 ntBASIC3.22□□□□□ -1.89
HPS5Q9UPZ3 RNA5SP237-201ENST00000410414 113 ntBASIC3.22□□□□□ -1.89
HPS5Q9UPZ3 AC027119.1-201ENST00000440877 241 ntBASIC3.22□□□□□ -1.89
HPS5Q9UPZ3 RNU6-75P-201ENST00000515944 104 ntBASIC3.22□□□□□ -1.89
HPS5Q9UPZ3 RNU7-43P-201ENST00000516554 64 ntBASIC3.22□□□□□ -1.89
HPS5Q9UPZ3 RNU7-156P-201ENST00000517214 74 ntBASIC3.22□□□□□ -1.89
HPS5Q9UPZ3 SNORA31.26-201ENST00000517250 137 ntBASIC3.22□□□□□ -1.89
HPS5Q9UPZ3 MIR3605-201ENST00000583214 100 ntBASIC3.22□□□□□ -1.89
HPS5Q9UPZ3 AC005520.4-201ENST00000604337 90 ntBASIC3.22□□□□□ -1.89
HPS5Q9UPZ3 AC021506.2-201ENST00000612354 169 ntBASIC3.22□□□□□ -1.89
HPS5Q9UPZ3 AL662814.1-201ENST00000617364 121 ntBASIC3.22□□□□□ -1.89
HPS5Q9UPZ3 AL353997.5-201ENST00000618886 171 ntBASIC3.22□□□□□ -1.89
HPS5Q9UPZ3 Y_RNA.338-201ENST00000365320 114 ntBASIC3.21□□□□□ -1.9
HPS5Q9UPZ3 RNU6-949P-201ENST00000384040 107 ntBASIC3.21□□□□□ -1.9
HPS5Q9UPZ3 Y_RNA.491-201ENST00000384417 107 ntBASIC3.21□□□□□ -1.9
HPS5Q9UPZ3 MIR9-2-201ENST00000384838 87 ntBASIC3.21□□□□□ -1.9
HPS5Q9UPZ3 RNA5SP425-201ENST00000410336 112 ntBASIC3.21□□□□□ -1.9
HPS5Q9UPZ3 RN7SKP123-201ENST00000410732 291 ntBASIC3.21□□□□□ -1.9
HPS5Q9UPZ3 HMGN2P3-201ENST00000433603 273 ntBASIC3.21□□□□□ -1.9
HPS5Q9UPZ3 HMGN2P5-201ENST00000436882 273 ntBASIC3.21□□□□□ -1.9
HPS5Q9UPZ3 AC138749.4-201ENST00000563970 127 ntBASIC3.21□□□□□ -1.9
HPS5Q9UPZ3 AC026271.5-201ENST00000577873 130 ntBASIC3.21□□□□□ -1.9
HPS5Q9UPZ3 AL357312.1-201ENST00000603879 298 ntBASIC3.21□□□□□ -1.9
HPS5Q9UPZ3 IKZF2-213ENST00000457361 9350 ntTSL 5 BASIC3.2□□□□□ -1.9
HPS5Q9UPZ3 AC092435.3-201ENST00000565538 3654 ntBASIC3.2□□□□□ -1.9
HPS5Q9UPZ3 MIR26A1-201ENST00000362205 77 ntBASIC3.2□□□□□ -1.9
HPS5Q9UPZ3 SNORD38B-201ENST00000384690 67 ntBASIC3.2□□□□□ -1.9
HPS5Q9UPZ3 RNU6-141P-201ENST00000410499 105 ntBASIC3.2□□□□□ -1.9
HPS5Q9UPZ3 MIR548AO-201ENST00000579992 96 ntBASIC3.2□□□□□ -1.9
HPS5Q9UPZ3 DLEU2_6.1-201ENST00000610536 112 ntBASIC3.2□□□□□ -1.9
HPS5Q9UPZ3 SNORD38B-202ENST00000625943 69 ntBASIC3.2□□□□□ -1.9
HPS5Q9UPZ3 RNA5SP289-201ENST00000362332 137 ntBASIC3.19□□□□□ -1.9
HPS5Q9UPZ3 Y_RNA.12-201ENST00000362393 112 ntBASIC3.19□□□□□ -1.9
HPS5Q9UPZ3 SNORD36A-201ENST00000362874 73 ntBASIC3.19□□□□□ -1.9
HPS5Q9UPZ3 Y_RNA.283-201ENST00000364798 112 ntBASIC3.19□□□□□ -1.9
HPS5Q9UPZ3 MIR548U-201ENST00000390728 81 ntBASIC3.19□□□□□ -1.9
HPS5Q9UPZ3 AC019129.1-201ENST00000403786 261 ntBASIC3.19□□□□□ -1.9
HPS5Q9UPZ3 AL023284.1-201ENST00000403956 276 ntBASIC3.19□□□□□ -1.9
HPS5Q9UPZ3 RNA5SP21-201ENST00000410917 96 ntBASIC3.19□□□□□ -1.9
HPS5Q9UPZ3 RPS29P12-201ENST00000460178 152 ntBASIC3.19□□□□□ -1.9
HPS5Q9UPZ3 YWHAEP2-201ENST00000580066 112 ntBASIC3.19□□□□□ -1.9
HPS5Q9UPZ3 YWHAEP3-201ENST00000582767 121 ntBASIC3.19□□□□□ -1.9
HPS5Q9UPZ3 MAPK10-266ENST00000641066 6555 ntBASIC3.19□□□□□ -1.9
HPS5Q9UPZ3 CHD9-218ENST00000566029 13110 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
HPS5Q9UPZ3 OR2J3-203ENST00000641960 3342 ntAPPRIS P1 BASIC3.19□□□□□ -1.9
HPS5Q9UPZ3 HDX-206ENST00000506585 6158 ntTSL 2 BASIC3.18□□□□□ -1.9
HPS5Q9UPZ3 ZMYM1-203ENST00000373330 4203 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
HPS5Q9UPZ3 RNU4-53P-201ENST00000410828 140 ntBASIC3.18□□□□□ -1.9
HPS5Q9UPZ3 BX276092.1-201ENST00000427368 251 ntBASIC3.18□□□□□ -1.9
HPS5Q9UPZ3 AC104332.2-201ENST00000429959 156 ntBASIC3.18□□□□□ -1.9
HPS5Q9UPZ3 SNORA9.3-201ENST00000516383 129 ntBASIC3.18□□□□□ -1.9
HPS5Q9UPZ3 MIR4764-201ENST00000580680 88 ntBASIC3.18□□□□□ -1.9
HPS5Q9UPZ3 MIR3616-201ENST00000584070 92 ntBASIC3.18□□□□□ -1.9
HPS5Q9UPZ3 CERS6-AS1-202ENST00000594898 499 ntTSL 5 BASIC3.18□□□□□ -1.9
HPS5Q9UPZ3 AC108206.1-201ENST00000570186 4159 ntBASIC3.18□□□□□ -1.9
HPS5Q9UPZ3 KTN1-203ENST00000395309 4021 ntAPPRIS ALT2 TSL 5 BASIC3.17□□□□□ -1.9
HPS5Q9UPZ3 Y_RNA.36-201ENST00000362602 112 ntBASIC3.17□□□□□ -1.9
HPS5Q9UPZ3 SNORA8.1-201ENST00000384250 140 ntBASIC3.17□□□□□ -1.9
HPS5Q9UPZ3 MIR29C-201ENST00000385231 88 ntBASIC3.17□□□□□ -1.9
HPS5Q9UPZ3 RN7SKP223-201ENST00000410582 62 ntBASIC3.17□□□□□ -1.9
HPS5Q9UPZ3 SNORD92-201ENST00000585078 85 ntBASIC3.17□□□□□ -1.9
HPS5Q9UPZ3 RNU6-461P-201ENST00000364195 107 ntBASIC3.16□□□□□ -1.9
HPS5Q9UPZ3 TRAJ1-201ENST00000390536 62 ntAPPRIS P1 BASIC3.16□□□□□ -1.9
HPS5Q9UPZ3 SNORD90-201ENST00000391145 111 ntBASIC3.16□□□□□ -1.9
HPS5Q9UPZ3 MIR1287-201ENST00000408492 90 ntBASIC3.16□□□□□ -1.9
HPS5Q9UPZ3 BX510359.4-201ENST00000423750 193 ntBASIC3.16□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 108.5 ms